FFCP PHASE1:Mm9::chr13:88961355..88961366,+: Difference between revisions
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{{FFCP|EntrezGene=13612|HGNC=|MCL_coexpression_id=1|UniProt=Q8C4U8|association_with_transcript=108bp_to_ENSMUST00000043111_5end|description=CAGE_peak_10_at_Edil3_5end|id=chr13:88961355..88961366,+|ontology_enrichment_celltype=CL:0000117!9.75e-08!23;CL:0000337!9.75e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.27e-10,23;CL:0000337,8.27e-10,23;CL:0002610,4.19e-09,3;CL:0002614,2.27e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.12e-21!75;UBERON:0001016!3.12e-21!75;UBERON:0000955!4.48e-21!50;UBERON:0006238!4.48e-21!50;UBERON:0001049!5.13e-21!52;UBERON:0005068!5.13e-21!52;UBERON:0006241!5.13e-21!52;UBERON:0007135!5.13e-21!52;UBERON:0000033!5.44e-21!63;UBERON:0001017!1.89e-20!73;UBERON:0005743!1.89e-20!73;UBERON:0002616!2.99e-20!49;UBERON:0004121!1.13e-18!102;UBERON:0000924!1.13e-18!102;UBERON:0006601!1.13e-18!102;UBERON:0002346!8.30e-18!71;UBERON:0003075!8.30e-18!71;UBERON:0007284!8.30e-18!71;UBERON:0003056!3.38e-17!49;UBERON:0003080!4.80e-16!40;UBERON:0002020!2.34e-15!34;UBERON:0002780!3.29e-15!39;UBERON:0001890!3.29e-15!39;UBERON:0006240!3.29e-15!39;UBERON:0002791!4.47e-13!29;UBERON:0003528!4.47e-13!29;UBERON:0001893!4.47e-13!29;UBERON:0002021!4.06e-11!10;UBERON:0000411!4.06e-11!10;UBERON:0001950!4.06e-11!10;UBERON:0007811!4.97e-11!86;UBERON:0000153!1.15e-10!94;UBERON:0000956!1.82e-09!21;UBERON:0001869!1.82e-09!21;UBERON:0000203!1.82e-09!21;UBERON:0002619!2.58e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.84e-36,54;UBERON:0001049,2.36e-32,52;UBERON:0005068,2.36e-32,52;UBERON:0006241,2.36e-32,52;UBERON:0007135,2.36e-32,52;UBERON:0001017,3.17e-32,73;UBERON:0001016,3.23e-31,75;UBERON:0002020,9.54e-30,34;UBERON:0002021,6.60e-29,10;UBERON:0000411,6.60e-29,10;UBERON:0001950,6.60e-29,10;UBERON:0000955,6.22e-28,47;UBERON:0006238,6.22e-28,47;UBERON:0002616,4.48e-26,46;UBERON:0003528,1.11e-25,29;UBERON:0002791,1.11e-25,29;UBERON:0001893,1.11e-25,29;UBERON:0002346,2.68e-25,64;UBERON:0003075,2.68e-25,64;UBERON:0007284,2.68e-25,64;UBERON:0003080,4.76e-25,40;UBERON:0004121,1.86e-23,95;UBERON:0000924,1.86e-23,95;UBERON:0006601,1.86e-23,95;UBERON:0002780,4.48e-23,39;UBERON:0001890,4.48e-23,39;UBERON:0006240,4.48e-23,39;UBERON:0010371,1.59e-21,73;UBERON:0002619,9.01e-20,17;UBERON:0003056,1.22e-19,49;UBERON:0000956,1.11e-18,21;UBERON:0001869,1.11e-18,21;UBERON:0000203,1.11e-18,21;UBERON:0010314,5.65e-16,92;UBERON:0000025,7.50e-12,114;UBERON:0002950,6.76e-11,4;UBERON:0001891,6.76e-11,4;UBERON:0009616,6.76e-11,4;UBERON:0010286,6.76e-11,4;UBERON:0004111,1.02e-10,122;UBERON:0004684,4.19e-09,3;UBERON:0002275,4.19e-09,3;UBERON:0011216,1.71e-08,194;UBERON:0002038,2.27e-08,3;UBERON:0009663,2.27e-08,3;UBERON:0009661,2.27e-08,3;UBERON:0000125,2.27e-08,3;UBERON:0002308,2.27e-08,3;UBERON:0002420,4.71e-08,8;UBERON:0007245,4.71e-08,8;UBERON:0010009,4.71e-08,8;UBERON:0010011,4.71e-08,8;UBERON:0000454,4.71e-08,8;UBERON:0003076,1.32e-07,12;UBERON:0003057,1.32e-07,12;UBERON:0002240,2.40e-07,6;UBERON:0005174,2.40e-07,6;UBERON:0001137,2.40e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0,0.207379224616955,0,0.420649922702764,0,1.10434270475807,0,0.0958454710182364,0,1.10115880999389,4.08599481872601,3.99376986466233,0.131886287730194,0.182975287204819,0,1.11673199600552,1.68828783009504,1.5279824777681,1.76777151284201,0.711858403995515,1.3047961207771,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,3.14560342750128,3.20250421973039,1.00523481690292,4.34560800480691,4.34716277461562,2.28566849015516,3.40706652442291,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,0,0.136072998302656,0.384341160854549,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,0.205809224758569,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0,0.493647061806363,0.608929898229199,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,3.70850604021019,0,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,2.76195141904306,5.15605962095457,2.06223818812425,8.22099023724771,4.5323633843382,6.07520250208625,3.60256962579376,5.43770890781046,4.14208249401456,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0.256100609619477,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0,0,0.191288332068843,0.441182838239031,0|short_description=p10@Edil3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13612 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C4U8 | |||
|association_with_transcript=108bp_to_ENSMUST00000043111_5end | |||
|cluster_id=chr13:88961355..88961366,+ | |||
|description=CAGE_peak_10_at_Edil3_5end | |||
|id=chr13:88961355..88961366,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.75e-08!23;CL:0000337!9.75e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.27e-10,23;CL:0000337,8.27e-10,23;CL:0002610,4.19e-09,3;CL:0002614,2.27e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.12e-21!75;UBERON:0001016!3.12e-21!75;UBERON:0000955!4.48e-21!50;UBERON:0006238!4.48e-21!50;UBERON:0001049!5.13e-21!52;UBERON:0005068!5.13e-21!52;UBERON:0006241!5.13e-21!52;UBERON:0007135!5.13e-21!52;UBERON:0000033!5.44e-21!63;UBERON:0001017!1.89e-20!73;UBERON:0005743!1.89e-20!73;UBERON:0002616!2.99e-20!49;UBERON:0004121!1.13e-18!102;UBERON:0000924!1.13e-18!102;UBERON:0006601!1.13e-18!102;UBERON:0002346!8.30e-18!71;UBERON:0003075!8.30e-18!71;UBERON:0007284!8.30e-18!71;UBERON:0003056!3.38e-17!49;UBERON:0003080!4.80e-16!40;UBERON:0002020!2.34e-15!34;UBERON:0002780!3.29e-15!39;UBERON:0001890!3.29e-15!39;UBERON:0006240!3.29e-15!39;UBERON:0002791!4.47e-13!29;UBERON:0003528!4.47e-13!29;UBERON:0001893!4.47e-13!29;UBERON:0002021!4.06e-11!10;UBERON:0000411!4.06e-11!10;UBERON:0001950!4.06e-11!10;UBERON:0007811!4.97e-11!86;UBERON:0000153!1.15e-10!94;UBERON:0000956!1.82e-09!21;UBERON:0001869!1.82e-09!21;UBERON:0000203!1.82e-09!21;UBERON:0002619!2.58e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.84e-36,54;UBERON:0001049,2.36e-32,52;UBERON:0005068,2.36e-32,52;UBERON:0006241,2.36e-32,52;UBERON:0007135,2.36e-32,52;UBERON:0001017,3.17e-32,73;UBERON:0001016,3.23e-31,75;UBERON:0002020,9.54e-30,34;UBERON:0002021,6.60e-29,10;UBERON:0000411,6.60e-29,10;UBERON:0001950,6.60e-29,10;UBERON:0000955,6.22e-28,47;UBERON:0006238,6.22e-28,47;UBERON:0002616,4.48e-26,46;UBERON:0003528,1.11e-25,29;UBERON:0002791,1.11e-25,29;UBERON:0001893,1.11e-25,29;UBERON:0002346,2.68e-25,64;UBERON:0003075,2.68e-25,64;UBERON:0007284,2.68e-25,64;UBERON:0003080,4.76e-25,40;UBERON:0004121,1.86e-23,95;UBERON:0000924,1.86e-23,95;UBERON:0006601,1.86e-23,95;UBERON:0002780,4.48e-23,39;UBERON:0001890,4.48e-23,39;UBERON:0006240,4.48e-23,39;UBERON:0010371,1.59e-21,73;UBERON:0002619,9.01e-20,17;UBERON:0003056,1.22e-19,49;UBERON:0000956,1.11e-18,21;UBERON:0001869,1.11e-18,21;UBERON:0000203,1.11e-18,21;UBERON:0010314,5.65e-16,92;UBERON:0000025,7.50e-12,114;UBERON:0002950,6.76e-11,4;UBERON:0001891,6.76e-11,4;UBERON:0009616,6.76e-11,4;UBERON:0010286,6.76e-11,4;UBERON:0004111,1.02e-10,122;UBERON:0004684,4.19e-09,3;UBERON:0002275,4.19e-09,3;UBERON:0011216,1.71e-08,194;UBERON:0002038,2.27e-08,3;UBERON:0009663,2.27e-08,3;UBERON:0009661,2.27e-08,3;UBERON:0000125,2.27e-08,3;UBERON:0002308,2.27e-08,3;UBERON:0002420,4.71e-08,8;UBERON:0007245,4.71e-08,8;UBERON:0010009,4.71e-08,8;UBERON:0010011,4.71e-08,8;UBERON:0000454,4.71e-08,8;UBERON:0003076,1.32e-07,12;UBERON:0003057,1.32e-07,12;UBERON:0002240,2.40e-07,6;UBERON:0005174,2.40e-07,6;UBERON:0001137,2.40e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0,0.207379224616955,0,0.420649922702764,0,1.10434270475807,0,0.0958454710182364,0,1.10115880999389,4.08599481872601,3.99376986466233,0.131886287730194,0.182975287204819,0,1.11673199600552,1.68828783009504,1.5279824777681,1.76777151284201,0.711858403995515,1.3047961207771,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,3.14560342750128,3.20250421973039,1.00523481690292,4.34560800480691,4.34716277461562,2.28566849015516,3.40706652442291,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,0,0.136072998302656,0.384341160854549,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,0.205809224758569,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0,0.493647061806363,0.608929898229199,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,3.70850604021019,0,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,2.76195141904306,5.15605962095457,2.06223818812425,8.22099023724771,4.5323633843382,6.07520250208625,3.60256962579376,5.43770890781046,4.14208249401456,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0.256100609619477,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p10@Edil3 | |||
}} |
Revision as of 09:27, 6 August 2015
Short description: | p10@Edil3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Edil3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 108bp_to_ENSMUST00000043111_5end |
EntrezGene: | 13612 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.27e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.27e-10 | 23 |
raphe nuclei neuron | 4.19e-09 | 3 |
neuron of the substantia nigra | 2.27e-08 | 3 |