FFCP PHASE1:Hg19::chr3:39448443..39448499,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_at_chr3:39448443..39448499,+ | |||
|id=chr3:39448443..39448499,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.45e-28!180;CL:0000548!1.34e-26!679;CL:0000004!1.34e-26!679;CL:0000255!1.34e-26!679;CL:0000012!2.66e-26!682;CL:0002321!1.14e-22!248;CL:0000220!4.03e-22!246;CL:0000183!8.90e-20!59;CL:0000144!1.29e-19!625;CL:0000680!2.98e-19!57;CL:0000056!2.98e-19!57;CL:0000355!2.98e-19!57;CL:0000187!1.42e-18!54;CL:0000393!7.92e-18!60;CL:0000211!7.92e-18!60;CL:0002371!6.83e-17!591;CL:0000222!3.65e-16!119;CL:0000192!7.00e-16!42;CL:0000514!7.00e-16!42;CL:0000003!2.48e-15!722;CL:0000359!2.42e-13!32;CL:0000066!3.85e-10!254;CL:0000057!8.23e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.43e-13;32!CL:0000192;8.47e-12;43!CL:0000187;3.34e-11;55!CL:0000393;2.94e-09;61!CL:0000211;2.94e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.03e-21,250;CL:0000680,2.04e-20,58;CL:0000056,2.04e-20,58;CL:0000355,2.04e-20,58;CL:0000187,1.09e-19,55;CL:0000393,1.12e-18,61;CL:0000211,1.12e-18,61;CL:0000222,9.92e-17,121;CL:0000192,1.44e-16,43;CL:0000514,1.44e-16,43;CL:0000359,4.02e-14,32;CL:0000057,3.55e-09,76;CL:0000066,6.96e-08,253 | |||
|ontology_enrichment_development_v019=CL:0000514;8.47e-12;43!CL:0000355;6.81e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.51e-21!83;UBERON:0002329!1.51e-21!83;UBERON:0003077!1.51e-21!83;UBERON:0003059!1.51e-21!83;UBERON:0007282!1.51e-21!83;UBERON:0009618!1.51e-21!83;UBERON:0007285!1.51e-21!83;UBERON:0000486!3.60e-20!82;UBERON:0004290!4.94e-20!70;UBERON:0001134!3.20e-16!61;UBERON:0002036!3.20e-16!61;UBERON:0003082!3.20e-16!61;UBERON:0002385!8.28e-15!63;UBERON:0001015!8.28e-15!63;UBERON:0000383!8.28e-15!63;UBERON:0001637!3.90e-14!42;UBERON:0003509!3.90e-14!42;UBERON:0004572!3.90e-14!42;UBERON:0005256!4.90e-13!143;UBERON:0002049!7.38e-13!79;UBERON:0007798!7.38e-13!79;UBERON:0000490!2.86e-12!138;UBERON:0004872!8.00e-12!84;UBERON:0001981!2.15e-11!60;UBERON:0007500!2.15e-11!60;UBERON:0004537!2.15e-11!60;UBERON:0006965!2.15e-11!60;UBERON:0000055!6.70e-11!69;UBERON:0004573!1.80e-10!33;UBERON:0004571!1.80e-10!33;UBERON:0002100!2.29e-10!216;UBERON:0003104!2.54e-10!238;UBERON:0009142!2.54e-10!238;UBERON:0000119!5.03e-09!312;UBERON:0003914!6.95e-09!118;UBERON:0000483!1.53e-08!309;UBERON:0000481!3.70e-08!347;UBERON:0004535!5.21e-08!110;UBERON:0000475!6.50e-08!365;UBERON:0001009!2.29e-07!113;UBERON:0002199!5.03e-07!45;UBERON:0002416!5.03e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.25e-10;42!UBERON:0003509;1.25e-10;42!UBERON:0004572;1.25e-10;42!UBERON:0004573;4.97e-10;33!UBERON:0004571;4.97e-10;33!UBERON:0007500;1.71e-08;56!UBERON:0001981;1.71e-08;56!UBERON:0004537;1.71e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.95e-22,78;UBERON:0000486,7.78e-22,83;UBERON:0002329,1.14e-21,71;UBERON:0003059,1.14e-21,71;UBERON:0007282,1.14e-21,71;UBERON:0004290,1.14e-21,71;UBERON:0009618,1.14e-21,71;UBERON:0007524,1.22e-21,73;UBERON:0003077,2.75e-21,72;UBERON:0007285,2.75e-21,72;UBERON:0001134,1.36e-17,62;UBERON:0002036,1.36e-17,62;UBERON:0003082,1.36e-17,62;UBERON:0002385,3.81e-16,64;UBERON:0001015,3.81e-16,64;UBERON:0000383,3.81e-16,64;UBERON:0001637,6.01e-15,42;UBERON:0003509,6.01e-15,42;UBERON:0004572,6.01e-15,42;UBERON:0000490,6.67e-15,148;UBERON:0002049,1.78e-13,78;UBERON:0007798,1.78e-13,78;UBERON:0004872,1.95e-12,83;UBERON:0007500,4.84e-12,59;UBERON:0001981,4.84e-12,59;UBERON:0004537,4.84e-12,59;UBERON:0006965,4.84e-12,59;UBERON:0005256,7.56e-12,122;UBERON:0000055,2.17e-11,68;UBERON:0004573,4.84e-11,33;UBERON:0004571,4.84e-11,33;UBERON:0003104,9.41e-11,160;UBERON:0009142,9.41e-11,160;UBERON:0003914,3.51e-09,117;UBERON:0002100,4.76e-09,199;UBERON:0004535,6.51e-09,109;UBERON:0000119,1.05e-08,309;UBERON:0000483,3.23e-08,306;UBERON:0001009,5.82e-08,112;UBERON:0003102,6.37e-08,99;UBERON:0002199,2.03e-07,46;UBERON:0002416,2.03e-07,46 | |||
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| |||
|short_description=p@chr3:39448443..39448499,+ | |||
}} |
Revision as of 18:18, 21 January 2014
Short description: | p@chr3:39448443..39448499, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:39448443..39448499, + |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.03e-21 | 250 |
muscle precursor cell | 2.04e-20 | 58 |
myoblast | 2.04e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.04e-20 | 58 |
muscle cell | 1.09e-19 | 55 |
electrically responsive cell | 1.12e-18 | 61 |
electrically active cell | 1.12e-18 | 61 |
mesodermal cell | 9.92e-17 | 121 |
smooth muscle cell | 1.44e-16 | 43 |
smooth muscle myoblast | 1.44e-16 | 43 |
vascular associated smooth muscle cell | 4.02e-14 | 32 |
fibroblast | 3.55e-09 | 76 |
epithelial cell | 6.96e-08 | 253 |