FFCP PHASE1:Hg19::chr3:3841108..3841126,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20980 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UXK5 | |||
|association_with_transcript=0bp_to_ENST00000319331,NM_020873,uc003bpt.3_5end | |||
|description=CAGE_peak_1_at_LRRN1_5end | |||
|id=chr3:3841108..3841126,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.17e-07!25;CL:0000047!6.29e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.28e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.29e-09,25;CL:0000047,5.65e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.87e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.23e-41!86;UBERON:0000073!1.47e-38!94;UBERON:0001016!1.47e-38!94;UBERON:0001017!3.13e-38!82;UBERON:0003075!6.98e-35!86;UBERON:0007284!6.98e-35!86;UBERON:0001049!6.64e-34!57;UBERON:0005068!6.64e-34!57;UBERON:0006241!6.64e-34!57;UBERON:0007135!6.64e-34!57;UBERON:0007023!2.99e-33!115;UBERON:0002346!1.29e-31!90;UBERON:0000955!7.13e-30!69;UBERON:0006238!7.13e-30!69;UBERON:0002616!1.70e-29!59;UBERON:0004121!5.91e-28!169;UBERON:0003056!1.05e-27!61;UBERON:0000924!3.79e-26!173;UBERON:0006601!3.79e-26!173;UBERON:0000153!1.38e-25!129;UBERON:0007811!1.38e-25!129;UBERON:0000033!9.97e-25!123;UBERON:0003080!1.25e-24!42;UBERON:0002780!2.38e-24!41;UBERON:0001890!2.38e-24!41;UBERON:0006240!2.38e-24!41;UBERON:0002020!2.78e-21!34;UBERON:0003528!2.78e-21!34;UBERON:0001893!5.52e-21!34;UBERON:0002791!1.82e-20!33;UBERON:0001869!4.52e-20!32;UBERON:0000956!1.26e-15!25;UBERON:0000203!1.26e-15!25;UBERON:0002619!6.10e-14!22;UBERON:0001950!8.65e-13!20;UBERON:0000922!9.76e-11!612;UBERON:0003076!2.65e-10!15;UBERON:0003057!2.65e-10!15;UBERON:0000064!9.04e-10!219;UBERON:0004732!7.82e-09!13;UBERON:0000062!1.20e-08!511;UBERON:0004733!2.19e-08!12;UBERON:0002028!2.19e-08!12;UBERON:0007277!2.19e-08!12;UBERON:0002050!2.82e-08!605;UBERON:0005423!2.82e-08!605;UBERON:0000923!4.88e-08!604;UBERON:0005291!4.88e-08!604;UBERON:0006598!4.88e-08!604;UBERON:0002532!4.88e-08!604;UBERON:0000467!7.83e-08!625;UBERON:0000480!1.07e-07!626;UBERON:0007625!1.51e-07!11;UBERON:0000468!2.28e-07!659;UBERON:0002308!3.93e-07!9;UBERON:0000125!3.93e-07!9;UBERON:0002420!3.96e-07!9;UBERON:0007245!3.96e-07!9;UBERON:0010009!3.96e-07!9;UBERON:0010011!3.96e-07!9;UBERON:0000454!3.96e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;9.70e-22;34!UBERON:0002020;9.70e-22;34!UBERON:0002791;1.11e-21;32!UBERON:0001869;1.21e-21;32!UBERON:0001893;2.33e-21;34!UBERON:0000073;3.67e-21;53!UBERON:0002616;3.67e-21;53!UBERON:0002780;5.78e-21;41!UBERON:0001890;5.78e-21;41!UBERON:0000956;2.15e-18;25!UBERON:0000203;2.15e-18;25!UBERON:0000955;9.93e-17;68!UBERON:0001017;1.96e-16;75!UBERON:0002619;2.25e-16;22!UBERON:0001016;1.98e-15;83!UBERON:0001950;5.36e-15;20!UBERON:0004732;3.52e-10;13!UBERON:0004733;1.17e-09;12!UBERON:0002028;1.17e-09;12!UBERON:0007023;1.43e-09;114!UBERON:0007625;6.29e-09;11!UBERON:0000125;3.25e-08;9!UBERON:0002308;3.25e-08;9!UBERON:0002420;3.28e-08;9!UBERON:0007245;3.28e-08;9!UBERON:0010009;3.28e-08;9!UBERON:0010011;3.28e-08;9!UBERON:0000454;3.28e-08;9!UBERON:0000922;1.86e-07;49!UBERON:0002680;2.11e-07;9!UBERON:0001895;2.11e-07;9!UBERON:0001032;2.16e-07;24!UBERON:0004456;2.16e-07;24!UBERON:0002104;3.93e-07;21!UBERON:0000020;6.51e-07;23!UBERON:0009663;8.58e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.22e-46,81;UBERON:0001016,8.78e-44,89;UBERON:0001049,7.21e-40,56;UBERON:0005068,7.21e-40,56;UBERON:0006241,7.21e-40,56;UBERON:0007135,7.21e-40,56;UBERON:0003075,7.25e-40,82;UBERON:0007284,7.25e-40,82;UBERON:0000073,2.05e-37,53;UBERON:0002616,2.05e-37,53;UBERON:0002346,1.39e-36,86;UBERON:0000955,4.67e-36,68;UBERON:0006238,4.67e-36,68;UBERON:0003056,3.53e-33,61;UBERON:0010371,2.18e-32,104;UBERON:0004121,5.84e-32,171;UBERON:0000924,5.84e-32,171;UBERON:0006601,5.84e-32,171;UBERON:0007023,1.50e-31,114;UBERON:0002780,8.69e-29,41;UBERON:0001890,8.69e-29,41;UBERON:0003080,8.69e-29,41;UBERON:0006240,8.69e-29,41;UBERON:0003528,4.05e-25,34;UBERON:0002020,4.05e-25,34;UBERON:0001893,9.21e-25,34;UBERON:0001869,1.14e-23,32;UBERON:0002791,1.21e-23,32;UBERON:0011216,1.27e-23,223;UBERON:0010314,3.14e-21,132;UBERON:0000956,2.35e-18,25;UBERON:0000203,2.35e-18,25;UBERON:0002619,2.42e-16,22;UBERON:0001950,5.75e-15,20;UBERON:0003076,5.33e-12,15;UBERON:0003057,5.33e-12,15;UBERON:0000922,2.51e-11,592;UBERON:0004732,3.03e-10,13;UBERON:0004733,1.04e-09,12;UBERON:0002028,1.04e-09,12;UBERON:0007277,1.04e-09,12;UBERON:0005423,4.47e-09,581;UBERON:0007625,6.51e-09,11;UBERON:0002050,1.19e-08,564;UBERON:0000483,2.81e-08,306;UBERON:0000125,3.23e-08,9;UBERON:0002308,3.23e-08,9;UBERON:0002420,3.26e-08,9;UBERON:0007245,3.26e-08,9;UBERON:0010009,3.26e-08,9;UBERON:0010011,3.26e-08,9;UBERON:0000454,3.26e-08,9;UBERON:0000923,4.34e-08,560;UBERON:0010316,4.34e-08,560;UBERON:0005291,4.34e-08,560;UBERON:0006598,4.34e-08,560;UBERON:0010317,4.34e-08,560;UBERON:0002532,4.34e-08,560;UBERON:0000119,6.70e-08,309;UBERON:0002680,1.86e-07,9;UBERON:0001895,1.86e-07,9;UBERON:0010092,1.86e-07,9;UBERON:0000020,2.52e-07,24;UBERON:0001032,2.52e-07,24;UBERON:0004456,2.52e-07,24;UBERON:0000970,4.36e-07,21;UBERON:0002104,4.36e-07,21;UBERON:0009663,8.69e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,7.61775203154677,11.1648186875588,0.436882744260345,3.16520373874144,0,0,0,0,0,0,12.3121058076788,3.87601313364081,28.8378343759841,18.3191031763876,18.0674241096207,21.4677913707113,0,0,0,0,0,2.63187409637329,0,0,0,0,0,2.34880351467878,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0.545812300115692,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,3.27683166757279,0,1.28019066769952,0.800791974072025,1.72425731986345,0.661044872784862,1.90810750907073,0.569212969109448,3.52342313622563,3.05818582500183,1.32171328579026,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0,0.651844533267181,0.946895611469467,0,0,0,0,0,0,0,0.164437904603676,0,0,0.296573126324121,1.60524496853828,1.04535523804977,0,0,0,0,0.637130828648193,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0.869079113764942,0.795285947051099,0,59.6514696305268,69.6230308032451,67.7206197694002,6.28699562389021,1.09288586487763,0.370784442784429,0.649094787309367,1.39303789839414,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0,0,7.26515652695671,9.21881479167998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0.506328996723799,0.584622030967192,0,0,0,0,0,0.169560592310488,0.773043412653187,0,1.14721838155602,61.4747478893161,88.1322959337877,50.428171205371,43.9522873265171,57.024512297892,106.938366209218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1111324801205,0,0,1.77236972004421,16.7755977777567,2.21379189377604,54.7301314852297,2.85350742062426,0,0,0,0,0,17.3197610430328,60.0519497770898,44.2630777269048,0,0,0,0,0,0,0,0,2.81201501960331,6.88726725615324,0.283550194484773,0.268675568108545,0,1.15014803749563,0,0,3.52457796419313,1.15295962733569,0.75745460055828,0.190493682876507,1.14596527667483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.483483869456,3.48613383440118,33.291006063625,0,0,0,0,0,2.85273810081437,0.144781306667579,0.410952645100767,0,0,0.197030760201927,0.862510299438069,0,41.4174237482615,49.4531444658963,13.9191986299985,20.7720169014592,17.8622850462886,2.99602809578873,0,7.45947924184864,0,0,0,0,0,0,0,1.20378439891088,4.5481500811197,4.1389228517002,0,0.553107505625109,0,0,8.23544217146054,0.413536052245775,0.431428401637234,0.640365346820666,7.57818928615649,6.65741758041988,3.93107381328584,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,25.8653346691237,0.276242966807689,0,0,0,2.70719767744447,2.92658280996776,0,1.46139224653261,1.58327443339314,0,0,0,0,0.270946437543853,0.501689773854853,0,1.66215201785745,0.895499018888713,0,0,40.2626696432731,71.8352074082356,42.6245697010237,1.03041011647722,7.23398772064913,5.44562699475881,0,0,0,9.86041326579644,1.23238893691716,2.6095624703442,5.09995318192763,0,3.33538396002726,8.43743611419399,153.847357597562,2.14870389969272,3.65161127993702,0.638063562472921,7.58683356416624,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,1.239293992399,0,0,0,0,0,0.633322905892992,0,0,0,0.192444225451024,0.670302275535787,0,0.847294206991012,0.86101074534246,0,0.443430153536676,1.60806380144872,0,0.764637207142375,1.13929437434833,0,0,0.648473311192717,0,0.79312517629427,0.320472213382419,3.84991942105343,0,0,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,11.9372242368845,8.61197574414652,3.99308912729002,19.882952955326,27.5712056164605,0,0,4.01138275443188,9.16540745954921,0.552567831062295,0,0,0,0,37.115629023846,0.179021174675609,0,1.1837208676432,2.3948309234694,0,28.1106496367613,14.0079828224395,39.9227596002388,0,21.7775399990527,4.34999745260876,2.73104275885199,3.55955110409873,0,0.689486746482929,0.583209226766509,7.63949977706486,51.3730003772027,38.2290710442543,22.8872604475625,29.7458209214994,15.664023804538,27.4231746442466,0,0,4.77091602723542,12.5336261431701,0,0.359030577639089,2.17294743844016,2.55200927785536,2.47313502185028,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,5.19332735381019,0.995261931078505,1.14994833854341,4.27721101453538,0.593042257361244,0.86494757262552,0.939797545549098,10.3797744790243,37.7211494230431,41.2305424476597,0.91227394607833,0.19566461893209,0,1.97292201424695,9.67925728389311,33.6680037793539,1.20054501294127,0,0,0,0,0.313932918407225,0,14.7996963935492,0,8.85154665509168,0,0,1.7472666824203,0,0,0,0,2.13375836274523,0.0882561266915003,15.5926711138567,0,0,13.6751319264698,9.38646637127054,3.28651163031288,7.68430781061669,2.59752492456769,0,0.114536596165916,8.2365598973743,0,2.23654564017779,0,3.53350935791397,2.40586546518366,0,0,34.223956456458,15.8810239514712,2.55493176133945,2.57859264851974,0,0.837847203816763,1.3749625440701,0.717873024576814,0.199679000498991,0,1.33902874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| |||
|short_description=p1@LRRN1 | |||
}} |
Revision as of 16:58, 21 January 2014
Short description: | p1@LRRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000319331, NM_020873, uc003bpt.3_5end |
EntrezGene: | LRRN1 |
HGNC: | 20980 |
UniProt: | Q6UXK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.29e-09 | 25 |
neuronal stem cell | 5.65e-08 | 8 |