FFCP PHASE1:Hg19::chr3:197439413..197439458,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3480 | |||
|description=CAGE_peak_at_chr3:197439413..197439458,+ | |||
|id=chr3:197439413..197439458,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.97e-42!140;CL:0002087!7.93e-38!119;CL:0002031!1.92e-36!124;CL:0000037!2.78e-29!172;CL:0000566!2.78e-29!172;CL:0002032!5.54e-27!165;CL:0000837!5.54e-27!165;CL:0000988!1.08e-25!182;CL:0000542!1.11e-25!53;CL:0000051!1.11e-25!53;CL:0000838!2.73e-25!52;CL:0002057!6.49e-20!42;CL:0000860!1.49e-19!45;CL:0000791!1.22e-15!18;CL:0000789!1.22e-15!18;CL:0002420!1.22e-15!18;CL:0002419!1.22e-15!18;CL:0000790!1.22e-15!18;CL:0000557!3.21e-13!71;CL:0000084!4.30e-13!25;CL:0000827!4.30e-13!25;CL:0002009!7.89e-13!65;CL:0000766!2.90e-12!76;CL:0000839!1.10e-11!70;CL:0002194!1.20e-11!63;CL:0000576!1.20e-11!63;CL:0000040!1.20e-11!63;CL:0000559!1.20e-11!63;CL:0000625!2.20e-11!11;CL:0000945!1.17e-10!24;CL:0000826!1.17e-10!24;CL:0000236!3.54e-09!14;CL:0000763!1.62e-07!112;CL:0000049!1.62e-07!112;CL:0000624!3.18e-07!6;CL:0000134!3.30e-07!358;CL:0002320!9.15e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.89e-38;18!CL:0000789;2.89e-38;18!CL:0002419;2.89e-38;18!CL:0000625;2.57e-26;11!CL:0000084;3.31e-26;25!CL:0000542;4.69e-22;53!CL:0000236;2.68e-18;13!CL:0002087;1.82e-17;104!CL:0000624;4.39e-16;6!CL:0000860;5.18e-13;33!CL:0002057;5.18e-13;33!CL:0000738;5.00e-10;136!CL:0000473;9.04e-10;39!CL:0000234;9.04e-10;39!CL:0000623;1.38e-09;3!CL:0000576;2.80e-09;48!CL:0000945;6.58e-09;24!CL:0000898;7.55e-09;3!CL:0000766;4.76e-08;69!CL:0000767;7.16e-08;3!CL:0000988;3.07e-07;177!CL:0002393;7.43e-07;6!CL:0002397;7.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.40e-56,136;CL:0002031,1.14e-51,120;CL:0002087,2.31e-50,115;CL:0000037,1.95e-42,168;CL:0002032,1.13e-39,161;CL:0000837,1.13e-39,161;CL:0000988,1.67e-39,177;CL:0000791,9.88e-39,18;CL:0000789,9.88e-39,18;CL:0002420,9.88e-39,18;CL:0002419,9.88e-39,18;CL:0000790,9.88e-39,18;CL:0000838,3.97e-38,52;CL:0000542,3.07e-37,53;CL:0000051,3.07e-37,53;CL:0000625,8.72e-27,11;CL:0000084,1.56e-26,25;CL:0000827,1.56e-26,25;CL:0000860,2.87e-17,42;CL:0002057,2.87e-17,42;CL:0000236,8.49e-17,14;CL:0000557,1.97e-16,67;CL:0000766,3.29e-16,72;CL:0000473,3.90e-16,48;CL:0000234,3.90e-16,48;CL:0000624,4.19e-16,6;CL:0002009,1.60e-15,61;CL:0000839,7.75e-14,66;CL:0002194,3.23e-13,59;CL:0000576,3.23e-13,59;CL:0000040,3.23e-13,59;CL:0000559,3.23e-13,59;CL:0000134,6.23e-13,354;CL:0002320,2.15e-12,361;CL:0000763,1.63e-10,108;CL:0000049,1.63e-10,108;CL:0000219,1.66e-10,386;CL:0000623,1.35e-09,3;CL:0000825,1.35e-09,3;CL:0000034,3.06e-09,441;CL:0000898,6.81e-09,3;CL:0000945,6.85e-09,24;CL:0000826,6.85e-09,24;CL:0000048,8.43e-09,427;CL:0000723,1.77e-08,433;CL:0000767,1.10e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.89e-38;18!CL:0000051;4.69e-22;53!CL:0002057;2.41e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.31e-11!102;UBERON:0003061!3.31e-11!102;UBERON:0002371!9.65e-11!80;UBERON:0002193!3.54e-09!112;UBERON:0001474!4.84e-09!86;UBERON:0004765!1.65e-07!101;UBERON:0001434!1.65e-07!101;UBERON:0002405!5.01e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.67e-14,76;UBERON:0002390,1.76e-12,98;UBERON:0003061,1.76e-12,98;UBERON:0001474,2.78e-12,82;UBERON:0002384,1.16e-11,371;UBERON:0002405,3.26e-11,93;UBERON:0002193,1.09e-10,108;UBERON:0004765,1.20e-10,90;UBERON:0001434,5.45e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.314843125254717,1.18009283054671,3.0706351847777,1.08371286321253,0,0,0,0.154934401160603,0,0,2.21598163412751,2.20598892217156,3.90619567288533,0,0,0,0,0,0,0.697287110717054,0.411167888021826,0.619412741790207,1.1507695692886,1.0246428261164,2.83778675866302,6.20542225325913,0.645484683583826,1.35426486594342,0.188242339542605,0,0.224723484445085,13.7737751566906,7.70229664982625,2.55734850319616,0.329851300186716,0.797854630486527,0.426224750532694,12.1887880224005,0,4.9825779919646,1.7587406567972,0,1.52032191293582,9.08099253950053,7.73383035573886,20.5700551836575,0.211255286311942,0.637812899895131,1.04829322754188,0.786300418025466,0.600707571366025,0.32145117339416,0.285012743741249,0,0.365328307529268,5.27988733383968,5.46138611262132,8.00558328477199,1.70692089026603,2.40237592221607,4.59801951963587,6.61044872784862,3.81621501814146,2.27685187643779,1.17447437874188,0.764546456250458,2.64342657158052,3.92355994087075,0,5.70458333330116,6.28817220398664,3.08402248499264,2.34061093546949,2.60737813306872,2.36723902867367,3.89653456815823,2.33961959458865,10.3112067616193,10.4120930454302,14.3526047795458,0.768547918354051,2.60118695119756,0.164437904603676,1.38175008892924,0.579606171470105,0.889719378972363,0.802622484269139,0,0.453237370790265,4.98186641682498,3.09264700934367,6.83153168452658,2.86708872891687,3.90650072313851,5.70271226669025,1.95747654801105,1.53583933385302,2.49861453104692,2.36777252044017,1.64225599384209,9.27391018833769,8.29064606928873,6.80674698249155,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,1.43094374583205,0.571994910780128,1.48583000531826,0.39752481473341,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58891016975863,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,1.65862492432618,1.15295962733569,0.37872730027914,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,13.7921532141349,12.075144192133,10.9091580837786,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,2.48121631347465,3.01999881146064,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0.284136146806413,0.23874448473769,0,0.921482106297696,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0.984678443688556,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0,0,0,0.568679216656392,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.587954384486266,0.435296032902013,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,1.17330829640882,0,0.213452994739353,0,0,0,0,0.14405479798815,0,1.17847017308398,0,0,0.407992870545287,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0.0846733320657845,0,0,0,0.275078873194468,0,1.1248694577575,3.0952078182318,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0.492555124496034,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0.365377795142688,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0.15543720058278,0.295710299979268,0.318593534327405,0,0.465788870628778,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0,1.22368352253234,0,0.308801447160972,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0.389720617678777,0.664324201566815,0.654261577023377,0,0,0,0.59996218756479,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0.558644917973244,0,0.0788617450012534,0,0,0.3062454773532,0.064229225096459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| |||
|short_description=p@chr3:197439413..197439458,+ | |||
}} |
Revision as of 23:38, 21 January 2014
Short description: | p@chr3:197439413..197439458, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:197439413..197439458, + |
Coexpression cluster: | C3480_CD14_Natural_CD4_CD8_CD19_CD34_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.67e-14 | 76 |
hematopoietic system | 1.76e-12 | 98 |
blood island | 1.76e-12 | 98 |
bone element | 2.78e-12 | 82 |
connective tissue | 1.16e-11 | 371 |
immune system | 3.26e-11 | 93 |
hemolymphoid system | 1.09e-10 | 108 |
skeletal element | 1.20e-10 | 90 |
skeletal system | 5.45e-09 | 100 |