FFCP PHASE1:Hg19::chr3:197205905..197205924,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:197205905..197205924,+ | |||
|id=chr3:197205905..197205924,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.49e-10!254;CL:0002319!2.04e-09!25;CL:0002586!4.90e-08!3;CL:0000047!3.32e-07!8;CL:0002605!3.47e-07!3;CL:0000133!6.62e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.03e-17;3!CL:0000149;1.56e-13;4!CL:0002319;2.09e-11;25!CL:0000540;3.41e-09;6!CL:0000404;3.41e-09;6!CL:0002149;3.41e-09;6!CL:0002255;3.41e-09;6!CL:0000047;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.39e-17,3;CL:0000047,1.47e-14,8;CL:0000149,1.95e-13,4;CL:0002319,2.21e-11,25;CL:0002149,2.26e-09,6;CL:0002255,2.26e-09,6;CL:0000540,2.89e-09,6;CL:0000031,2.89e-09,6;CL:0000404,2.89e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000031;3.41e-09;6 | |||
|ontology_enrichment_disease=DOID:305!2.99e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.04e-13;1!DOID:3001;3.41e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.10e-13,1;DOID:3001,2.26e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0007625!5.70e-15!11;UBERON:0000019!1.78e-09!19;UBERON:0000047!1.78e-09!19;UBERON:0004088!1.78e-09!19;UBERON:0003072!1.78e-09!19;UBERON:0003071!1.78e-09!19;UBERON:0004128!1.78e-09!19;UBERON:0000970!6.82e-09!20;UBERON:0002104!2.30e-08!21;UBERON:0001456!2.30e-08!21;UBERON:0000488!2.35e-08!4;UBERON:0001781!4.90e-08!3;UBERON:0001782!4.90e-08!3;UBERON:0005424!4.90e-08!3;UBERON:0005085!6.17e-08!29;UBERON:0003056!1.64e-07!61;UBERON:0000966!1.84e-07!5;UBERON:0005388!1.84e-07!5;UBERON:0001802!1.84e-07!5;UBERON:0000020!1.89e-07!23;UBERON:0001032!4.72e-07!24;UBERON:0004456!4.72e-07!24;UBERON:0005743!5.65e-07!86;UBERON:0004121!6.24e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.03e-17;3!UBERON:0001782;1.03e-17;3!UBERON:0001282;3.98e-14;1!UBERON:0009842;3.98e-14;1!UBERON:0003704;3.98e-14;1!UBERON:0001171;3.98e-14;1!UBERON:0001172;3.98e-14;1!UBERON:0000966;5.16e-11;5!UBERON:0005388;5.16e-11;5!UBERON:0001802;5.16e-11;5!UBERON:0007625;7.98e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.39e-17,3;UBERON:0005424,1.39e-17,3;UBERON:0001282,3.98e-14,1;UBERON:0009842,3.98e-14,1;UBERON:0003704,3.98e-14,1;UBERON:0001171,3.98e-14,1;UBERON:0001172,3.98e-14,1;UBERON:0001781,1.95e-13,4;UBERON:0007625,1.04e-10,11;UBERON:0000966,2.89e-09,6;UBERON:0005388,2.89e-09,6;UBERON:0001802,2.89e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.441175890929576,0.653638332277218,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.548751427043128,0,0.100528972411631,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0.411309970813294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.716243852959582,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,1.67516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,1.28225062558195,0.656029291399411,2.27764876265012,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53403023753232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,2.62066728448103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0.685209623233754,0,0,0,0.320635281006135,0,0.39961921916426,0,0,0,0,4.22458620922471,0,0.67952103036807,1.15063130943567,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947015026375446,0,0.889811221596536,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,1.20008329398946,0,0,0,0,0,0,0.226705925512272,0,0,2.8654214573038,0,0.657852148736121,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,1.81534561833168,0,0,1.31017534008077,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,1.86123831398592,1.91107787795487,0.223710863595585,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:197205905..197205924,+ | |||
}} |
Revision as of 23:38, 21 January 2014
Short description: | p@chr3:197205905..197205924, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:197205905..197205924, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.39e-17 | 3 |
neuronal stem cell | 1.47e-14 | 8 |
visual pigment cell | 1.95e-13 | 4 |
neural cell | 2.21e-11 | 25 |
epithelial cell of uterus | 2.26e-09 | 6 |
stromal cell of endometrium | 2.26e-09 | 6 |
neuron | 2.89e-09 | 6 |
neuroblast | 2.89e-09 | 6 |
electrically signaling cell | 2.89e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.39e-17 | 3 |
presumptive retinal pigmented epithelium | 1.39e-17 | 3 |
intralobular bile duct | 3.98e-14 | 1 |
acinus | 3.98e-14 | 1 |
intrahepatic bile duct | 3.98e-14 | 1 |
portal lobule | 3.98e-14 | 1 |
hepatic acinus | 3.98e-14 | 1 |
layer of retina | 1.95e-13 | 4 |
pigment epithelium of eye | 1.04e-10 | 11 |
retina | 2.89e-09 | 6 |
photoreceptor array | 2.89e-09 | 6 |
posterior segment of eyeball | 2.89e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.10e-13 | 1 |
female reproductive endometrioid cancer | 2.26e-09 | 6 |