FFCP PHASE1:Hg19::chr3:18466660..18466676,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |||
|TSSclassifier=strong | |||
|UniProt=Q01826 | |||
|association_with_transcript=152bp_to_ENST00000338745,NM_001195470,NM_002971,uc003cbh.2,uc003cbi.2_5end | |||
|description=CAGE_peak_5_at_SATB1_5end | |||
|id=chr3:18466660..18466676,- | |||
|ontology_enrichment_celltype=CL:0000037!2.06e-33!172;CL:0000566!2.06e-33!172;CL:0000738!9.23e-33!140;CL:0000988!1.31e-30!182;CL:0002032!4.90e-30!165;CL:0000837!4.90e-30!165;CL:0002087!6.68e-26!119;CL:0002031!6.99e-26!124;CL:0002057!4.99e-22!42;CL:0000766!4.75e-21!76;CL:0000763!2.93e-20!112;CL:0000049!2.93e-20!112;CL:0000860!6.36e-19!45;CL:0000557!1.22e-17!71;CL:0002009!2.86e-16!65;CL:0000839!8.65e-16!70;CL:0002194!1.22e-15!63;CL:0000576!1.22e-15!63;CL:0000040!1.22e-15!63;CL:0000559!1.22e-15!63;CL:0000791!2.44e-10!18;CL:0000789!2.44e-10!18;CL:0002420!2.44e-10!18;CL:0002419!2.44e-10!18;CL:0000790!2.44e-10!18;CL:0000838!1.21e-09!52;CL:0000542!3.92e-09!53;CL:0000051!3.92e-09!53;CL:0000084!1.39e-08!25;CL:0000827!1.39e-08!25;CL:0000625!4.08e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-23;33!CL:0002057;1.32e-23;33!CL:0000576;2.52e-17;48!CL:0000473;3.04e-15;39!CL:0000234;3.04e-15;39!CL:0000791;3.36e-14;18!CL:0000789;3.36e-14;18!CL:0002419;3.36e-14;18!CL:0000766;2.03e-13;69!CL:0002087;5.93e-12;104!CL:0000084;9.35e-11;25!CL:0000094;9.50e-10;8!CL:0000625;7.12e-09;11!CL:0000738;1.45e-08;136!CL:0000763;4.63e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.71e-40,136;CL:0000037,1.26e-35,168;CL:0000988,4.03e-32,177;CL:0002087,7.01e-32,115;CL:0002032,5.43e-31,161;CL:0000837,5.43e-31,161;CL:0002031,1.42e-29,120;CL:0000860,1.65e-29,42;CL:0002057,1.65e-29,42;CL:0000766,8.98e-26,72;CL:0000473,5.50e-24,48;CL:0000234,5.50e-24,48;CL:0000557,9.58e-21,67;CL:0002009,1.02e-20,61;CL:0000763,6.14e-20,108;CL:0000049,6.14e-20,108;CL:0002194,9.57e-20,59;CL:0000576,9.57e-20,59;CL:0000040,9.57e-20,59;CL:0000559,9.57e-20,59;CL:0000839,4.86e-18,66;CL:0000791,3.66e-14,18;CL:0000789,3.66e-14,18;CL:0002420,3.66e-14,18;CL:0002419,3.66e-14,18;CL:0000790,3.66e-14,18;CL:0000084,8.73e-11,25;CL:0000827,8.73e-11,25;CL:0000838,1.06e-10,52;CL:0000542,2.54e-10,53;CL:0000051,2.54e-10,53;CL:0000094,1.35e-09,8;CL:0000625,4.80e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-21;42!CL:0000790;3.36e-14;18!CL:0000049;8.93e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.06e-21!102;UBERON:0003061!1.06e-21!102;UBERON:0007023!1.98e-21!115;UBERON:0002193!6.71e-19!112;UBERON:0002371!3.97e-15!80;UBERON:0001474!1.04e-13!86;UBERON:0002405!6.79e-12!115;UBERON:0002780!3.23e-11!41;UBERON:0001890!3.23e-11!41;UBERON:0006240!3.23e-11!41;UBERON:0001950!5.60e-11!20;UBERON:0004765!8.55e-11!101;UBERON:0001434!8.55e-11!101;UBERON:0001049!9.00e-11!57;UBERON:0005068!9.00e-11!57;UBERON:0006241!9.00e-11!57;UBERON:0007135!9.00e-11!57;UBERON:0003080!1.46e-10!42;UBERON:0002619!1.80e-10!22;UBERON:0002020!9.99e-10!34;UBERON:0003528!9.99e-10!34;UBERON:0001893!1.40e-09!34;UBERON:0001869!2.13e-09!32;UBERON:0002791!4.29e-09!33;UBERON:0000956!4.60e-09!25;UBERON:0000203!4.60e-09!25;UBERON:0002616!5.06e-08!59;UBERON:0001017!2.73e-07!82;UBERON:0005743!7.40e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.20e-15;20!UBERON:0002619;2.13e-15;22!UBERON:0000956;8.45e-13;25!UBERON:0000203;8.45e-13;25!UBERON:0001869;8.15e-12;32!UBERON:0003528;2.87e-11;34!UBERON:0002020;2.87e-11;34!UBERON:0001893;3.88e-11;34!UBERON:0002791;1.06e-10;32!UBERON:0002780;5.07e-09;41!UBERON:0001890;5.07e-09;41!UBERON:0000200;1.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.17e-27,98;UBERON:0003061,8.17e-27,98;UBERON:0002193,3.74e-23,108;UBERON:0002371,3.68e-18,76;UBERON:0002405,8.63e-18,93;UBERON:0001950,7.17e-16,20;UBERON:0001474,1.05e-15,82;UBERON:0002619,1.26e-15,22;UBERON:0001869,1.25e-13,32;UBERON:0003528,2.94e-13,34;UBERON:0002020,2.94e-13,34;UBERON:0000956,5.37e-13,25;UBERON:0000203,5.37e-13,25;UBERON:0004765,5.40e-13,90;UBERON:0007023,7.69e-13,114;UBERON:0002780,1.27e-12,41;UBERON:0001890,1.27e-12,41;UBERON:0003080,1.27e-12,41;UBERON:0006240,1.27e-12,41;UBERON:0001893,2.23e-12,34;UBERON:0002791,3.13e-12,32;UBERON:0001434,4.08e-11,100;UBERON:0001049,1.83e-10,56;UBERON:0005068,1.83e-10,56;UBERON:0006241,1.83e-10,56;UBERON:0007135,1.83e-10,56;UBERON:0000073,5.04e-10,53;UBERON:0002616,5.04e-10,53;UBERON:0000200,1.03e-07,6;UBERON:0000955,4.83e-07,68;UBERON:0006238,4.83e-07,68 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0,0,6.68719270643137,3.0706351847777,2.01260960310899,0,0.90361775633475,0,1.39440961044543,0.284338464974843,1.76160263600908,2.76997704265939,3.60980005446255,2.60413044859022,0.447830948479849,0.971680998056939,0.257575567634187,3.92575244704825,4.53451132426571,4.36651310138069,3.95129362739664,4.11167888021826,6.50383378879718,4.02769349251011,4.61089271752381,2.12834006899727,12.0660988257816,8.39130088658974,9.47985406160392,7.9061782607894,8.46009065179322,4.94391665779186,11.6311879100943,11.8743740018155,7.67204550958849,3.62836430205388,3.59034583718937,1.70489900213078,3.77272010217159,5.10646702222026,3.11411124497787,4.27122730936464,4.69334626578181,3.04064382587163,6.05399502633369,6.99727508376373,3.16462387440884,1.90129757680748,1.27562579979026,0.628975936525128,0.561643155732475,0.750884464207532,0.64290234678832,1.14005097496499,2.38700012638908,2.19196984517561,3.51992488922645,0,2.66852776159066,1.70692089026603,2.40237592221607,2.29900975981793,1.32208974556972,0.954053754535364,0.569212969109448,1.17447437874188,2.29363936875137,0,1.12101712596307,0.526768169550154,7.67168103443949,5.10913991573914,3.08402248499264,3.51091640320424,4.56291173287027,1.89379122293893,1.94826728407911,4.12218690475142,1.17842362989935,1.77227115666897,1.35401931882508,3.45846563259323,2.34106825607781,4.27538551969558,4.69795030235942,3.47763702882063,5.93146252648242,6.95606153033254,4.18142095219907,2.60611488204402,3.06576394881537,0.68725489096526,1.51811815211702,4.77848121486145,2.60433381542567,0.950452044448374,3.61380285786655,4.22355816809581,4.99722906209383,3.55165878066025,4.10563998460523,3.22570789159572,3.7441627409691,5.93780055919476,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.851363990735132,0,0,0.97364218096405,0.348259474598534,0.531831842075461,0.953962497221368,2.85997455390064,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0,0.71153252537342,0,0.805658634218294,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0.949265659568129,0.183201743930407,27.6738876615733,11.6334079244498,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,1.18800285728205,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.45071417671979,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.487185025805993,0,0.184099797284599,0.323292113637624,0,0.10075209822764,0,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0.348581828608555,0.518305275076852,0,0.36497735907583,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,2.53510069643662,1.96565443335525,0,3.5317047953172,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0,0,0.246217006087397,0,0.594524649154913,0,0,0.283550194484773,0.0895585227028483,0,0,1.97065295158377,0.44024217006613,0.829312462163088,1.29707958075265,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.61642896765115,0,1.45710687191585,4.13764596424047,2.80315847317372,3.59360501583295,0.508189248444927,0,0,0.335032530668698,0,6.74106321552464,26.9245313283622,9.53155680902882,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0.343143423810856,5.37596867919507,5.82428342210265,3.52200940751366,0.303127571446259,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,3.4120015221269,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0.309123034943167,0.366277859273374,0.577566499444116,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.356128142586949,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,1.41215701165169,0,0,0.443430153536676,0.229723400206959,3.04468565539302,3.0585488285695,3.98753031021914,2.85878130549347,3.29089818468955,3.8908398671563,3.24018862342869,2.37937552888281,0,0,0,0,0.144269212976445,1.77854608371035,0,0.399158742865633,0.766021480529467,2.11673582723883,0,0.842391534340376,1.82587743226554,0.47003968731907,0,1.01575066680962,0.1605880751037,1.61439765752838,3.40676990152261,0.687010689511529,1.84344458585075,3.13146551049382,2.16903884225481,0.390776190804081,0.556812347790485,0,0.270455678475983,3.3307196799782,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0.284136146806413,0.23874448473769,0,0.614321404198464,1.9882952955326,2.53204949538923,0.222617410045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| |||
|short_description=p5@SATB1 | |||
}} |
Revision as of 17:46, 21 January 2014
Short description: | p5@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SATB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 152bp_to_ENST00000338745, NM_001195470, NM_002971, uc003cbh.2, uc003cbi.2_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | Q01826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.17e-27 | 98 |
blood island | 8.17e-27 | 98 |
hemolymphoid system | 3.74e-23 | 108 |
bone marrow | 3.68e-18 | 76 |
immune system | 8.63e-18 | 93 |
neocortex | 7.17e-16 | 20 |
bone element | 1.05e-15 | 82 |
regional part of cerebral cortex | 1.26e-15 | 22 |
cerebral hemisphere | 1.25e-13 | 32 |
brain grey matter | 2.94e-13 | 34 |
gray matter | 2.94e-13 | 34 |
cerebral cortex | 5.37e-13 | 25 |
pallium | 5.37e-13 | 25 |
skeletal element | 5.40e-13 | 90 |
adult organism | 7.69e-13 | 114 |
regional part of forebrain | 1.27e-12 | 41 |
forebrain | 1.27e-12 | 41 |
anterior neural tube | 1.27e-12 | 41 |
future forebrain | 1.27e-12 | 41 |
telencephalon | 2.23e-12 | 34 |
regional part of telencephalon | 3.13e-12 | 32 |
skeletal system | 4.08e-11 | 100 |
neural tube | 1.83e-10 | 56 |
neural rod | 1.83e-10 | 56 |
future spinal cord | 1.83e-10 | 56 |
neural keel | 1.83e-10 | 56 |
regional part of nervous system | 5.04e-10 | 53 |
regional part of brain | 5.04e-10 | 53 |
gyrus | 1.03e-07 | 6 |
brain | 4.83e-07 | 68 |
future brain | 4.83e-07 | 68 |