FFCP PHASE1:Hg19::chr3:184017555..184017556,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=5708 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9559 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-135bp_to_ENST00000445558_5end | |||
|description=CAGE_peak_18_at_PSMD2_5end | |||
|id=chr3:184017555..184017556,+ | |||
|ontology_enrichment_celltype=CL:0002621!1.82e-12!3;CL:0002589!3.25e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002593;3.44e-21;2!CL:0002166;1.31e-14;3!CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4!CL:0002595;2.63e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.11e-21,2;CL:0002166,1.40e-14,3;CL:0000244,3.42e-11,4;CL:0000731,3.42e-11,4;CL:0002595,2.53e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.20e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.66e-12;14!DOID:120;7.45e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.66e-12,14;DOID:120,7.45e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.82e-12!3;UBERON:0001529!3.25e-08!2;UBERON:0007204!3.25e-08!2;UBERON:0004573!1.50e-07!33;UBERON:0004571!1.50e-07!33;UBERON:0001637!6.08e-07!42;UBERON:0003509!6.08e-07!42;UBERON:0004572!6.08e-07!42;UBERON:0000486!6.91e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.44e-21;2!UBERON:0001708;2.66e-11;4!UBERON:0008895;2.66e-11;4!UBERON:0003834;2.63e-09;5!UBERON:0011159;2.63e-09;5!UBERON:0001533;2.63e-09;5!UBERON:0000365;3.22e-09;5!UBERON:0002118;3.22e-09;5!UBERON:0005910;6.78e-08;6!UBERON:0003513;5.22e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.11e-21,2;UBERON:0001708,2.80e-11,4;UBERON:0008895,2.80e-11,4;UBERON:0003834,2.53e-09,5;UBERON:0001533,2.53e-09,5;UBERON:0011159,2.74e-09,5;UBERON:0000365,3.22e-09,5;UBERON:0002118,3.49e-09,5;UBERON:0010188,5.92e-08,6;UBERON:0002539,5.92e-08,6;UBERON:0008816,5.92e-08,6;UBERON:0005910,6.78e-08,6;UBERON:0003513,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01578553838631,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.661139661443912,0,0,0,0.929691098594572,0,0,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,2.11300293513511,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,1.29151611801369,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0.265841714557995,0,0,1.52322084867518,1.22061219961398,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@PSMD2 | |||
}} |
Revision as of 22:59, 21 January 2014
Short description: | p18@PSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_PSMD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_ENST00000445558_5end |
EntrezGene: | PSMD2 |
HGNC: | 9559 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.11e-21 | 2 |
epithelial cell of Malassez | 1.40e-14 | 3 |
transitional epithelial cell | 3.42e-11 | 4 |
urothelial cell | 3.42e-11 | 4 |
smooth muscle cell of the subclavian artery | 2.53e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.11e-21 | 2 |
jaw skeleton | 2.80e-11 | 4 |
splanchnocranium | 2.80e-11 | 4 |
thoracic segment blood vessel | 2.53e-09 | 5 |
subclavian artery | 2.53e-09 | 5 |
primary subdivision of cranial skeletal system | 2.74e-09 | 5 |
urothelium | 3.22e-09 | 5 |
right ovary | 3.49e-09 | 5 |
protuberance | 5.92e-08 | 6 |
pharyngeal arch | 5.92e-08 | 6 |
embryonic head | 5.92e-08 | 6 |
transitional epithelium | 6.78e-08 | 6 |
trunk blood vessel | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.66e-12 | 14 |
female reproductive organ cancer | 7.45e-07 | 27 |