FFCP PHASE1:Mm9::chr12:62625587..62625627,+: Difference between revisions
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{{FFCP|EntrezGene=238205|HGNC=|MCL_coexpression_id=1|UniProt=Q8BXA0|association_with_transcript=0bp_to_NM_178714,uc007nqm.1,uc007nqn.1_5end|description=CAGE_peak_4_at_Lrfn5_5end|id=chr12:62625587..62625627,+|ontology_enrichment_celltype=CL:0000117!4.27e-15!23;CL:0000337!4.27e-15!23;CL:0000540!6.41e-10!33;CL:0000047!6.41e-10!33;CL:0000031!6.41e-10!33;CL:0000404!6.41e-10!33;CL:0000393!3.97e-07!39;CL:0000211!3.97e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.52e-21,23;CL:0000337,5.52e-21,23;CL:0000540,6.85e-15,33;CL:0000047,6.85e-15,33;CL:0000031,6.85e-15,33;CL:0000404,6.85e-15,33;CL:0000393,7.12e-12,39;CL:0000211,7.12e-12,39;CL:0002319,2.43e-10,43;CL:0000221,5.31e-10,44;CL:0000133,5.31e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.05e-24!52;UBERON:0005068!2.05e-24!52;UBERON:0006241!2.05e-24!52;UBERON:0007135!2.05e-24!52;UBERON:0000033!1.03e-23!63;UBERON:0002020!1.52e-23!34;UBERON:0000955!4.56e-23!50;UBERON:0006238!4.56e-23!50;UBERON:0002616!2.27e-22!49;UBERON:0001017!3.69e-21!73;UBERON:0005743!3.69e-21!73;UBERON:0000073!6.43e-21!75;UBERON:0001016!6.43e-21!75;UBERON:0002791!5.87e-20!29;UBERON:0003528!5.87e-20!29;UBERON:0001893!5.87e-20!29;UBERON:0002346!6.46e-20!71;UBERON:0003075!6.46e-20!71;UBERON:0007284!6.46e-20!71;UBERON:0003056!1.46e-19!49;UBERON:0003080!9.42e-19!40;UBERON:0002780!7.57e-18!39;UBERON:0001890!7.57e-18!39;UBERON:0006240!7.57e-18!39;UBERON:0004121!1.13e-16!102;UBERON:0000924!1.13e-16!102;UBERON:0006601!1.13e-16!102;UBERON:0000956!5.53e-14!21;UBERON:0001869!5.53e-14!21;UBERON:0000203!5.53e-14!21;UBERON:0007811!2.16e-12!86;UBERON:0002619!3.28e-11!17;UBERON:0000153!5.62e-11!94;UBERON:0002021!1.20e-10!10;UBERON:0000411!1.20e-10!10;UBERON:0001950!1.20e-10!10;UBERON:0002420!3.52e-07!8;UBERON:0007245!3.52e-07!8;UBERON:0010009!3.52e-07!8;UBERON:0010011!3.52e-07!8;UBERON:0000454!3.52e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-39,54;UBERON:0001049,1.88e-36,52;UBERON:0005068,1.88e-36,52;UBERON:0006241,1.88e-36,52;UBERON:0007135,1.88e-36,52;UBERON:0001017,4.49e-36,73;UBERON:0002020,7.24e-36,34;UBERON:0001016,7.56e-35,75;UBERON:0000955,5.91e-31,47;UBERON:0006238,5.91e-31,47;UBERON:0003528,8.36e-31,29;UBERON:0002791,8.36e-31,29;UBERON:0001893,8.36e-31,29;UBERON:0002616,1.17e-29,46;UBERON:0002346,6.04e-28,64;UBERON:0003075,6.04e-28,64;UBERON:0007284,6.04e-28,64;UBERON:0003080,1.58e-27,40;UBERON:0002780,7.74e-26,39;UBERON:0001890,7.74e-26,39;UBERON:0006240,7.74e-26,39;UBERON:0004121,2.01e-25,95;UBERON:0000924,2.01e-25,95;UBERON:0006601,2.01e-25,95;UBERON:0010371,5.51e-25,73;UBERON:0000956,3.31e-21,21;UBERON:0001869,3.31e-21,21;UBERON:0000203,3.31e-21,21;UBERON:0003056,3.70e-21,49;UBERON:0002021,3.73e-20,10;UBERON:0000411,3.73e-20,10;UBERON:0001950,3.73e-20,10;UBERON:0002619,5.15e-18,17;UBERON:0010314,5.77e-18,92;UBERON:0000025,7.62e-12,114;UBERON:0004111,2.29e-11,122;UBERON:0002420,1.41e-10,8;UBERON:0007245,1.41e-10,8;UBERON:0010009,1.41e-10,8;UBERON:0010011,1.41e-10,8;UBERON:0000454,1.41e-10,8;UBERON:0003076,5.32e-09,12;UBERON:0003057,5.32e-09,12;UBERON:0002950,3.06e-08,4;UBERON:0001891,3.06e-08,4;UBERON:0009616,3.06e-08,4;UBERON:0010286,3.06e-08,4;UBERON:0002240,1.06e-07,6;UBERON:0005174,1.06e-07,6;UBERON:0001137,1.06e-07,6;UBERON:0011216,2.12e-07,194|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0,0,1.14058573539325,0.945041568321835,2.10324961351382,0.571301968807607,1.98781686856452,1.34739879136449,0.479227355091182,0.919218786610021,2.20231761998777,4.21368215681119,3.84016333140609,1.84640802822271,2.74462930807229,2.08365348222704,3.62937898701795,4.50210088025344,3.66715794664344,3.83017161115768,3.70166370077668,2.60959224155421,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,1.67557365450764,0,0,0,0,6.44099749440738,4.11750542536764,0.753926112677186,6.08385120672968,4.34716277461562,4.1557608911912,5.51620294430376,0,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.95251098811859,0.640568601424249,0.187403449119458,0.776110112217047,0,0,0,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,1.85228302282712,0,0,0,0,0,0.403367049246685,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,1.1270773567308,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,6.56385444916338,0,0,0,0,0,0,0,0,0,0,0.395287777946524,1.28528526568723,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0.643011105094777,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,1.01373675294467,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,5.52390283808612,9.73922372846974,3.43706364687375,11.6464028361009,10.5755145634558,6.07520250208625,7.65546045481175,8.60970577069989,6.21312374102184,0.103787347584177,0,0.682934423016537,0.486213434136588,0.419226325255965,0.183843508450014,0.888986911206461,1.23621034343337,0.962757628775446,2.02157769411038,0.25347929989024,0.754505365544305,0.749132059759059,0.704276676453562,0.746661096422973,0.476293691283074,0.347652977834566,0.77163688185482,0,1.17759136107518,1.02860775715625,0.70990322463735,0.715308569841963,0.290692833264657,0.752875043322645,0.592302255241736,0.914639864363863,0.789209134313529,0.950628796921032,1.68342681497322,0.474540072496697,0.886540341380071,1.22769312950907,0.619747364743864,0.771626443924566,0.999242311751784,0.233931608445408,0.429742108096597,0.956441660344217,0.441182838239031,0.695603506861264|short_description=p4@Lrfn5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:238205 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BXA0 | |||
|association_with_transcript=0bp_to_NM_178714,uc007nqm.1,uc007nqn.1_5end | |||
|cluster_id=chr12:62625587..62625627,+ | |||
|description=CAGE_peak_4_at_Lrfn5_5end | |||
|id=chr12:62625587..62625627,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.27e-15!23;CL:0000337!4.27e-15!23;CL:0000540!6.41e-10!33;CL:0000047!6.41e-10!33;CL:0000031!6.41e-10!33;CL:0000404!6.41e-10!33;CL:0000393!3.97e-07!39;CL:0000211!3.97e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.52e-21,23;CL:0000337,5.52e-21,23;CL:0000540,6.85e-15,33;CL:0000047,6.85e-15,33;CL:0000031,6.85e-15,33;CL:0000404,6.85e-15,33;CL:0000393,7.12e-12,39;CL:0000211,7.12e-12,39;CL:0002319,2.43e-10,43;CL:0000221,5.31e-10,44;CL:0000133,5.31e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.05e-24!52;UBERON:0005068!2.05e-24!52;UBERON:0006241!2.05e-24!52;UBERON:0007135!2.05e-24!52;UBERON:0000033!1.03e-23!63;UBERON:0002020!1.52e-23!34;UBERON:0000955!4.56e-23!50;UBERON:0006238!4.56e-23!50;UBERON:0002616!2.27e-22!49;UBERON:0001017!3.69e-21!73;UBERON:0005743!3.69e-21!73;UBERON:0000073!6.43e-21!75;UBERON:0001016!6.43e-21!75;UBERON:0002791!5.87e-20!29;UBERON:0003528!5.87e-20!29;UBERON:0001893!5.87e-20!29;UBERON:0002346!6.46e-20!71;UBERON:0003075!6.46e-20!71;UBERON:0007284!6.46e-20!71;UBERON:0003056!1.46e-19!49;UBERON:0003080!9.42e-19!40;UBERON:0002780!7.57e-18!39;UBERON:0001890!7.57e-18!39;UBERON:0006240!7.57e-18!39;UBERON:0004121!1.13e-16!102;UBERON:0000924!1.13e-16!102;UBERON:0006601!1.13e-16!102;UBERON:0000956!5.53e-14!21;UBERON:0001869!5.53e-14!21;UBERON:0000203!5.53e-14!21;UBERON:0007811!2.16e-12!86;UBERON:0002619!3.28e-11!17;UBERON:0000153!5.62e-11!94;UBERON:0002021!1.20e-10!10;UBERON:0000411!1.20e-10!10;UBERON:0001950!1.20e-10!10;UBERON:0002420!3.52e-07!8;UBERON:0007245!3.52e-07!8;UBERON:0010009!3.52e-07!8;UBERON:0010011!3.52e-07!8;UBERON:0000454!3.52e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-39,54;UBERON:0001049,1.88e-36,52;UBERON:0005068,1.88e-36,52;UBERON:0006241,1.88e-36,52;UBERON:0007135,1.88e-36,52;UBERON:0001017,4.49e-36,73;UBERON:0002020,7.24e-36,34;UBERON:0001016,7.56e-35,75;UBERON:0000955,5.91e-31,47;UBERON:0006238,5.91e-31,47;UBERON:0003528,8.36e-31,29;UBERON:0002791,8.36e-31,29;UBERON:0001893,8.36e-31,29;UBERON:0002616,1.17e-29,46;UBERON:0002346,6.04e-28,64;UBERON:0003075,6.04e-28,64;UBERON:0007284,6.04e-28,64;UBERON:0003080,1.58e-27,40;UBERON:0002780,7.74e-26,39;UBERON:0001890,7.74e-26,39;UBERON:0006240,7.74e-26,39;UBERON:0004121,2.01e-25,95;UBERON:0000924,2.01e-25,95;UBERON:0006601,2.01e-25,95;UBERON:0010371,5.51e-25,73;UBERON:0000956,3.31e-21,21;UBERON:0001869,3.31e-21,21;UBERON:0000203,3.31e-21,21;UBERON:0003056,3.70e-21,49;UBERON:0002021,3.73e-20,10;UBERON:0000411,3.73e-20,10;UBERON:0001950,3.73e-20,10;UBERON:0002619,5.15e-18,17;UBERON:0010314,5.77e-18,92;UBERON:0000025,7.62e-12,114;UBERON:0004111,2.29e-11,122;UBERON:0002420,1.41e-10,8;UBERON:0007245,1.41e-10,8;UBERON:0010009,1.41e-10,8;UBERON:0010011,1.41e-10,8;UBERON:0000454,1.41e-10,8;UBERON:0003076,5.32e-09,12;UBERON:0003057,5.32e-09,12;UBERON:0002950,3.06e-08,4;UBERON:0001891,3.06e-08,4;UBERON:0009616,3.06e-08,4;UBERON:0010286,3.06e-08,4;UBERON:0002240,1.06e-07,6;UBERON:0005174,1.06e-07,6;UBERON:0001137,1.06e-07,6;UBERON:0011216,2.12e-07,194 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0,0,1.14058573539325,0.945041568321835,2.10324961351382,0.571301968807607,1.98781686856452,1.34739879136449,0.479227355091182,0.919218786610021,2.20231761998777,4.21368215681119,3.84016333140609,1.84640802822271,2.74462930807229,2.08365348222704,3.62937898701795,4.50210088025344,3.66715794664344,3.83017161115768,3.70166370077668,2.60959224155421,0,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,1.67557365450764,0,0,0,0,6.44099749440738,4.11750542536764,0.753926112677186,6.08385120672968,4.34716277461562,4.1557608911912,5.51620294430376,0,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.95251098811859,0.640568601424249,0.187403449119458,0.776110112217047,0,0,0,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,1.85228302282712,0,0,0,0,0,0.403367049246685,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,1.1270773567308,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,6.56385444916338,0,0,0,0,0,0,0,0,0,0,0.395287777946524,1.28528526568723,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0.643011105094777,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,1.01373675294467,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,5.52390283808612,9.73922372846974,3.43706364687375,11.6464028361009,10.5755145634558,6.07520250208625,7.65546045481175,8.60970577069989,6.21312374102184,0.103787347584177,0,0.682934423016537,0.486213434136588,0.419226325255965,0.183843508450014,0.888986911206461,1.23621034343337,0.962757628775446,2.02157769411038,0.25347929989024,0.754505365544305,0.749132059759059,0.704276676453562,0.746661096422973,0.476293691283074,0.347652977834566,0.77163688185482,0,1.17759136107518,1.02860775715625,0.70990322463735,0.715308569841963,0.290692833264657,0.752875043322645,0.592302255241736,0.914639864363863,0.789209134313529,0.950628796921032,1.68342681497322,0.474540072496697,0.886540341380071,1.22769312950907,0.619747364743864,0.771626443924566,0.999242311751784,0.233931608445408,0.429742108096597,0.956441660344217,0.441182838239031,0.695603506861264 | |||
|short_description=p4@Lrfn5 | |||
}} |
Revision as of 03:45, 5 August 2015
Short description: | p4@Lrfn5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lrfn5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_178714, uc007nqm.1, uc007nqn.1_5end |
EntrezGene: | 238205 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.52e-21 | 23 |
neuroblast (sensu Vertebrata) | 5.52e-21 | 23 |
neuron | 6.85e-15 | 33 |
neuronal stem cell | 6.85e-15 | 33 |
neuroblast | 6.85e-15 | 33 |
electrically signaling cell | 6.85e-15 | 33 |
electrically responsive cell | 7.12e-12 | 39 |
electrically active cell | 7.12e-12 | 39 |
neural cell | 2.43e-10 | 43 |
ectodermal cell | 5.31e-10 | 44 |
neurectodermal cell | 5.31e-10 | 44 |