FFCP PHASE1:Mm9::chr12:29308237..29308259,-: Difference between revisions
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{{FFCP|EntrezGene=71693|HGNC=|MCL_coexpression_id=426|UniProt=Q3SXB8|association_with_transcript=-82bp_to_ENSMUST00000036136,NM_027866,uc007nfr.1_5end|description=CAGE_peak_3_at_Colec11_5end|id=chr12:29308237..29308259,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,7.53e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!4.09e-20!47;UBERON:0002107!1.42e-15!22;UBERON:0007499!1.42e-15!22;UBERON:0006925!1.42e-15!22;UBERON:0009497!1.42e-15!22;UBERON:0000015!1.42e-15!22;UBERON:0002423!1.42e-15!22;UBERON:0006235!1.42e-15!22;UBERON:0008835!1.42e-15!22;UBERON:0003894!1.42e-15!22;UBERON:0004161!1.42e-15!22;UBERON:0008836!1.42e-15!22;UBERON:0009854!2.13e-14!23;UBERON:0009856!2.13e-14!23;UBERON:0009569!6.26e-14!66;UBERON:0002365!1.32e-13!25;UBERON:0002330!1.32e-13!25;UBERON:0005256!1.70e-13!47;UBERON:0005172!8.68e-13!49;UBERON:0005173!8.68e-13!49;UBERON:0002417!8.68e-13!49;UBERON:0000916!8.68e-13!49;UBERON:0000926!2.53e-12!193;UBERON:0004120!2.53e-12!193;UBERON:0006603!2.53e-12!193;UBERON:0001048!2.75e-12!147;UBERON:0000466!3.83e-10!79;UBERON:0002368!1.43e-09!60;UBERON:0002530!1.86e-09!65;UBERON:0003104!2.88e-09!131;UBERON:0009142!2.88e-09!131;UBERON:0005177!4.71e-09!85;UBERON:0005911!1.68e-08!69;UBERON:0007100!2.19e-08!18;UBERON:0000948!2.19e-08!18;UBERON:0005498!2.19e-08!18;UBERON:0004140!2.19e-08!18;UBERON:0009881!2.19e-08!18;UBERON:0004141!2.19e-08!18;UBERON:0003084!2.19e-08!18;UBERON:0007005!2.19e-08!18;UBERON:0004139!2.19e-08!18;UBERON:0004291!2.19e-08!18;UBERON:0002100!8.87e-08!98;UBERON:0004535!9.12e-08!23;UBERON:0001009!9.12e-08!23;UBERON:0005057!2.23e-07!51;UBERON:0000949!3.49e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.54e-40,47;UBERON:0002107,8.35e-38,22;UBERON:0007499,8.35e-38,22;UBERON:0006925,8.35e-38,22;UBERON:0009497,8.35e-38,22;UBERON:0000015,8.35e-38,22;UBERON:0002423,8.35e-38,22;UBERON:0006235,8.35e-38,22;UBERON:0008835,8.35e-38,22;UBERON:0003894,8.35e-38,22;UBERON:0004161,8.35e-38,22;UBERON:0008836,8.35e-38,22;UBERON:0009854,6.65e-36,23;UBERON:0009856,6.65e-36,23;UBERON:0002365,1.47e-32,25;UBERON:0002330,1.47e-32,25;UBERON:0005256,5.09e-29,45;UBERON:0005172,3.49e-22,49;UBERON:0005173,3.49e-22,49;UBERON:0002417,3.49e-22,49;UBERON:0000916,3.49e-22,49;UBERON:0003104,1.84e-19,61;UBERON:0009142,1.84e-19,61;UBERON:0002368,7.58e-17,60;UBERON:0002530,5.03e-15,65;UBERON:0009569,1.08e-14,66;UBERON:0007100,6.27e-13,18;UBERON:0000948,6.27e-13,18;UBERON:0005498,6.27e-13,18;UBERON:0004140,6.27e-13,18;UBERON:0009881,6.27e-13,18;UBERON:0004141,6.27e-13,18;UBERON:0003084,6.27e-13,18;UBERON:0007005,6.27e-13,18;UBERON:0004139,6.27e-13,18;UBERON:0004291,6.27e-13,18;UBERON:0000949,6.61e-13,72;UBERON:0001048,5.38e-12,134;UBERON:0000025,1.09e-11,114;UBERON:0003929,1.11e-11,55;UBERON:0004535,2.09e-11,23;UBERON:0001009,2.09e-11,23;UBERON:0005177,3.59e-11,79;UBERON:0000490,6.39e-11,66;UBERON:0002100,7.20e-11,90;UBERON:0004111,2.20e-10,122;UBERON:0005911,3.18e-08,69;UBERON:0001041,3.54e-07,80;UBERON:0004872,4.67e-07,33|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,1.14613375975503,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,3.76823835312181,43.8816177260507,0,2.69851595818909,5.19821133958135,7.16843019355737,1.12355536105401,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0.517875767294343,1.63286352971307,2.25530924795977,2.43572382649713,2.7673859670727,1.95939432718409,0.587943535678524,0.628332956648377,0.741584903203122,0.722996784599558,0.884610551949874,0.161766849947409,0.883366073841574,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.631325567659422,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0.393528463494808,1.54267112887378,2.32533944750408,1.07309360559848,1.5179494507732,3.29119699826961,5.58169377868924,8.02581214503972,8.04099930839328,3.73235195994786,6.44190810049784,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.58489226135736,0,0,0,0,0.571242563048644,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,11.5616524563988,1.50160595144485,2.94838492669805,1.12431056192427,2.63718157805054,2.894125917029,3.56476192493988,3.74004978686054,5.99900339067631,5.49122826376163,18.6898668485561,17.8627654880882,16.5379966750717,12.1237861414614,8.96987067609561,10.1313139486307,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.938760993154008,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.8858587585951,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.534196811001766,0.651547837414304,0,0,0,0,0,0,0.922305443831782,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.847328283455281,0.220528398054962,0.8244312647074,0.322928853391811,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.404593039154462,1.90102948168273,0.523511883968059,0.129614973291793,0,0,1.04661582230785,1.82004339502807,0.972255941720238,1.42075805825504,1.18269287843545,0.704143431874524,0.781226309063701,0.314578033277133,0,0,0.316011120628178,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0.467507608726276,0.906921534460845,0,0,0,0.772758376128762,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.565879024158229,0.37456602987953,0.448176066834085,0.34461281373368,0,0.347652977834566,0.964546102318525,0.824171801606613,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.470546902076653,0.338458431566706,0.365855945745545,0.526139422875686,0.407412341537585,1.68342681497322,0.355905054372522,0.394017929502254,0.818462086339379,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,1.28922632428979,0,1.10295709559758,0.231867835620421|short_description=p3@Colec11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71693 | |||
|HGNC= | |||
|MCL_coexpression_id=426 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3SXB8 | |||
|association_with_transcript=-82bp_to_ENSMUST00000036136,NM_027866,uc007nfr.1_5end | |||
|cluster_id=chr12:29308237..29308259,- | |||
|description=CAGE_peak_3_at_Colec11_5end | |||
|id=chr12:29308237..29308259,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.53e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.09e-20!47;UBERON:0002107!1.42e-15!22;UBERON:0007499!1.42e-15!22;UBERON:0006925!1.42e-15!22;UBERON:0009497!1.42e-15!22;UBERON:0000015!1.42e-15!22;UBERON:0002423!1.42e-15!22;UBERON:0006235!1.42e-15!22;UBERON:0008835!1.42e-15!22;UBERON:0003894!1.42e-15!22;UBERON:0004161!1.42e-15!22;UBERON:0008836!1.42e-15!22;UBERON:0009854!2.13e-14!23;UBERON:0009856!2.13e-14!23;UBERON:0009569!6.26e-14!66;UBERON:0002365!1.32e-13!25;UBERON:0002330!1.32e-13!25;UBERON:0005256!1.70e-13!47;UBERON:0005172!8.68e-13!49;UBERON:0005173!8.68e-13!49;UBERON:0002417!8.68e-13!49;UBERON:0000916!8.68e-13!49;UBERON:0000926!2.53e-12!193;UBERON:0004120!2.53e-12!193;UBERON:0006603!2.53e-12!193;UBERON:0001048!2.75e-12!147;UBERON:0000466!3.83e-10!79;UBERON:0002368!1.43e-09!60;UBERON:0002530!1.86e-09!65;UBERON:0003104!2.88e-09!131;UBERON:0009142!2.88e-09!131;UBERON:0005177!4.71e-09!85;UBERON:0005911!1.68e-08!69;UBERON:0007100!2.19e-08!18;UBERON:0000948!2.19e-08!18;UBERON:0005498!2.19e-08!18;UBERON:0004140!2.19e-08!18;UBERON:0009881!2.19e-08!18;UBERON:0004141!2.19e-08!18;UBERON:0003084!2.19e-08!18;UBERON:0007005!2.19e-08!18;UBERON:0004139!2.19e-08!18;UBERON:0004291!2.19e-08!18;UBERON:0002100!8.87e-08!98;UBERON:0004535!9.12e-08!23;UBERON:0001009!9.12e-08!23;UBERON:0005057!2.23e-07!51;UBERON:0000949!3.49e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.54e-40,47;UBERON:0002107,8.35e-38,22;UBERON:0007499,8.35e-38,22;UBERON:0006925,8.35e-38,22;UBERON:0009497,8.35e-38,22;UBERON:0000015,8.35e-38,22;UBERON:0002423,8.35e-38,22;UBERON:0006235,8.35e-38,22;UBERON:0008835,8.35e-38,22;UBERON:0003894,8.35e-38,22;UBERON:0004161,8.35e-38,22;UBERON:0008836,8.35e-38,22;UBERON:0009854,6.65e-36,23;UBERON:0009856,6.65e-36,23;UBERON:0002365,1.47e-32,25;UBERON:0002330,1.47e-32,25;UBERON:0005256,5.09e-29,45;UBERON:0005172,3.49e-22,49;UBERON:0005173,3.49e-22,49;UBERON:0002417,3.49e-22,49;UBERON:0000916,3.49e-22,49;UBERON:0003104,1.84e-19,61;UBERON:0009142,1.84e-19,61;UBERON:0002368,7.58e-17,60;UBERON:0002530,5.03e-15,65;UBERON:0009569,1.08e-14,66;UBERON:0007100,6.27e-13,18;UBERON:0000948,6.27e-13,18;UBERON:0005498,6.27e-13,18;UBERON:0004140,6.27e-13,18;UBERON:0009881,6.27e-13,18;UBERON:0004141,6.27e-13,18;UBERON:0003084,6.27e-13,18;UBERON:0007005,6.27e-13,18;UBERON:0004139,6.27e-13,18;UBERON:0004291,6.27e-13,18;UBERON:0000949,6.61e-13,72;UBERON:0001048,5.38e-12,134;UBERON:0000025,1.09e-11,114;UBERON:0003929,1.11e-11,55;UBERON:0004535,2.09e-11,23;UBERON:0001009,2.09e-11,23;UBERON:0005177,3.59e-11,79;UBERON:0000490,6.39e-11,66;UBERON:0002100,7.20e-11,90;UBERON:0004111,2.20e-10,122;UBERON:0005911,3.18e-08,69;UBERON:0001041,3.54e-07,80;UBERON:0004872,4.67e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,1.14613375975503,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,3.76823835312181,43.8816177260507,0,2.69851595818909,5.19821133958135,7.16843019355737,1.12355536105401,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0.517875767294343,1.63286352971307,2.25530924795977,2.43572382649713,2.7673859670727,1.95939432718409,0.587943535678524,0.628332956648377,0.741584903203122,0.722996784599558,0.884610551949874,0.161766849947409,0.883366073841574,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.631325567659422,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0.393528463494808,1.54267112887378,2.32533944750408,1.07309360559848,1.5179494507732,3.29119699826961,5.58169377868924,8.02581214503972,8.04099930839328,3.73235195994786,6.44190810049784,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.58489226135736,0,0,0,0,0.571242563048644,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,11.5616524563988,1.50160595144485,2.94838492669805,1.12431056192427,2.63718157805054,2.894125917029,3.56476192493988,3.74004978686054,5.99900339067631,5.49122826376163,18.6898668485561,17.8627654880882,16.5379966750717,12.1237861414614,8.96987067609561,10.1313139486307,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.938760993154008,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.8858587585951,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.534196811001766,0.651547837414304,0,0,0,0,0,0,0.922305443831782,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.847328283455281,0.220528398054962,0.8244312647074,0.322928853391811,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.404593039154462,1.90102948168273,0.523511883968059,0.129614973291793,0,0,1.04661582230785,1.82004339502807,0.972255941720238,1.42075805825504,1.18269287843545,0.704143431874524,0.781226309063701,0.314578033277133,0,0,0.316011120628178,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0.467507608726276,0.906921534460845,0,0,0,0.772758376128762,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.565879024158229,0.37456602987953,0.448176066834085,0.34461281373368,0,0.347652977834566,0.964546102318525,0.824171801606613,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.470546902076653,0.338458431566706,0.365855945745545,0.526139422875686,0.407412341537585,1.68342681497322,0.355905054372522,0.394017929502254,0.818462086339379,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,1.28922632428979,0,1.10295709559758,0.231867835620421 | |||
|short_description=p3@Colec11 | |||
}} |
Revision as of 22:57, 4 August 2015
Short description: | p3@Colec11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Colec11_5end |
Coexpression cluster: | MCL_coexpression_mm9:426 |
Association with transcript: | -82bp_to_ENSMUST00000036136, NM_027866, uc007nfr.1_5end |
EntrezGene: | 71693 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.53e-07 | 5 |