FFCP PHASE1:Hg19::chr3:14989076..14989113,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7182 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7972 | |||
|TSSclassifier=strong | |||
|UniProt=C9JMI6,P49116 | |||
|association_with_transcript=0bp_to_ENST00000413118,ENST00000425241_5end | |||
|description=CAGE_peak_1_at_NR2C2_5end | |||
|id=chr3:14989076..14989113,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.84e-14!42;CL:0000860!6.42e-13!45;CL:0000037!9.14e-13!172;CL:0000566!9.14e-13!172;CL:0002032!3.50e-11!165;CL:0000837!3.50e-11!165;CL:0000738!5.79e-11!140;CL:0000988!6.32e-11!182;CL:0000763!3.79e-09!112;CL:0000049!3.79e-09!112;CL:0002087!1.32e-08!119;CL:0002031!1.39e-07!124;CL:0000766!2.34e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.89e-14;33!CL:0002057;5.89e-14;33!CL:0000576;5.43e-08;48!CL:0000473;2.08e-07;39!CL:0000234;2.08e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.84e-14,42;CL:0002057,4.84e-14,42;CL:0000037,2.84e-13,168;CL:0002032,1.18e-11,161;CL:0000837,1.18e-11,161;CL:0000738,1.71e-11,136;CL:0000988,2.17e-11,177;CL:0000763,1.09e-09,108;CL:0000049,1.09e-09,108;CL:0002087,4.24e-09,115;CL:0000473,4.34e-09,48;CL:0000234,4.34e-09,48;CL:0002031,5.17e-08,120;CL:0000766,5.71e-08,72;CL:0002009,7.29e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;7.89e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.10e-25!115;UBERON:0001049!9.27e-14!57;UBERON:0005068!9.27e-14!57;UBERON:0006241!9.27e-14!57;UBERON:0007135!9.27e-14!57;UBERON:0001017!5.58e-13!82;UBERON:0005743!3.50e-12!86;UBERON:0000073!4.27e-12!94;UBERON:0001016!4.27e-12!94;UBERON:0003080!9.66e-12!42;UBERON:0002780!2.59e-11!41;UBERON:0001890!2.59e-11!41;UBERON:0006240!2.59e-11!41;UBERON:0000955!7.37e-11!69;UBERON:0006238!7.37e-11!69;UBERON:0002616!1.75e-10!59;UBERON:0002020!1.27e-09!34;UBERON:0003528!1.27e-09!34;UBERON:0002791!3.30e-09!33;UBERON:0001893!4.56e-09!34;UBERON:0001869!1.18e-08!32;UBERON:0002390!1.31e-07!102;UBERON:0003061!1.31e-07!102;UBERON:0000956!3.44e-07!25;UBERON:0000203!3.44e-07!25;UBERON:0002619!3.51e-07!22;UBERON:0002193!4.01e-07!112;UBERON:0003075!4.29e-07!86;UBERON:0007284!4.29e-07!86;UBERON:0002346!4.63e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.20e-08;41!UBERON:0001890;1.20e-08;41!UBERON:0003528;2.11e-08;34!UBERON:0002020;2.11e-08;34!UBERON:0002791;3.41e-08;32!UBERON:0001869;5.40e-08;32!UBERON:0001893;9.83e-08;34!UBERON:0007023;1.09e-07;114!UBERON:0000073;1.21e-07;53!UBERON:0002616;1.21e-07;53!UBERON:0000956;3.99e-07;25!UBERON:0000203;3.99e-07;25!UBERON:0002619;4.18e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.25e-25,114;UBERON:0001049,2.46e-13,56;UBERON:0005068,2.46e-13,56;UBERON:0006241,2.46e-13,56;UBERON:0007135,2.46e-13,56;UBERON:0001017,1.35e-12,81;UBERON:0000073,1.69e-12,53;UBERON:0002616,1.69e-12,53;UBERON:0001016,1.88e-12,89;UBERON:0002780,2.59e-11,41;UBERON:0001890,2.59e-11,41;UBERON:0003080,2.59e-11,41;UBERON:0006240,2.59e-11,41;UBERON:0000955,1.74e-10,68;UBERON:0006238,1.74e-10,68;UBERON:0003528,1.27e-09,34;UBERON:0002020,1.27e-09,34;UBERON:0001893,4.56e-09,34;UBERON:0002791,5.24e-09,32;UBERON:0001869,1.18e-08,32;UBERON:0002390,4.15e-08,98;UBERON:0003061,4.15e-08,98;UBERON:0002193,1.46e-07,108;UBERON:0000956,3.44e-07,25;UBERON:0000203,3.44e-07,25;UBERON:0002619,3.51e-07,22 | |||
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| |||
|short_description=p1@NR2C2 | |||
}} |
Revision as of 17:35, 21 January 2014
Short description: | p1@NR2C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR2C2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000413118, ENST00000425241_5end |
EntrezGene: | NR2C2 |
HGNC: | 7972 |
UniProt: | C9JMI6P49116 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.84e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.84e-14 | 42 |
hematopoietic stem cell | 2.84e-13 | 168 |
hematopoietic oligopotent progenitor cell | 1.18e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-11 | 161 |
leukocyte | 1.71e-11 | 136 |
hematopoietic cell | 2.17e-11 | 177 |
myeloid cell | 1.09e-09 | 108 |
common myeloid progenitor | 1.09e-09 | 108 |
nongranular leukocyte | 4.24e-09 | 115 |
defensive cell | 4.34e-09 | 48 |
phagocyte | 4.34e-09 | 48 |
hematopoietic lineage restricted progenitor cell | 5.17e-08 | 120 |
myeloid leukocyte | 5.71e-08 | 72 |
macrophage dendritic cell progenitor | 7.29e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.25e-25 | 114 |
neural tube | 2.46e-13 | 56 |
neural rod | 2.46e-13 | 56 |
future spinal cord | 2.46e-13 | 56 |
neural keel | 2.46e-13 | 56 |
central nervous system | 1.35e-12 | 81 |
regional part of nervous system | 1.69e-12 | 53 |
regional part of brain | 1.69e-12 | 53 |
nervous system | 1.88e-12 | 89 |
regional part of forebrain | 2.59e-11 | 41 |
forebrain | 2.59e-11 | 41 |
anterior neural tube | 2.59e-11 | 41 |
future forebrain | 2.59e-11 | 41 |
brain | 1.74e-10 | 68 |
future brain | 1.74e-10 | 68 |
brain grey matter | 1.27e-09 | 34 |
gray matter | 1.27e-09 | 34 |
telencephalon | 4.56e-09 | 34 |
regional part of telencephalon | 5.24e-09 | 32 |
cerebral hemisphere | 1.18e-08 | 32 |
hematopoietic system | 4.15e-08 | 98 |
blood island | 4.15e-08 | 98 |
hemolymphoid system | 1.46e-07 | 108 |
cerebral cortex | 3.44e-07 | 25 |
pallium | 3.44e-07 | 25 |
regional part of cerebral cortex | 3.51e-07 | 22 |