FFCP PHASE1:Mm9::chr11:94871274..94871277,+: Difference between revisions
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{{FFCP|EntrezGene=217125|HGNC=|UniProt=|association_with_transcript=78bp_to_ENSMUST00000128512_5end|description=CAGE_peak_15_at_Samd14_5end|id=chr11:94871274..94871277,+|ontology_enrichment_celltype=CL:0000540!5.34e-11!33;CL:0000047!5.34e-11!33;CL:0000031!5.34e-11!33;CL:0000404!5.34e-11!33;CL:0000393!2.39e-10!39;CL:0000211!2.39e-10!39;CL:0000221!5.86e-10!44;CL:0000133!5.86e-10!44;CL:0002319!8.69e-10!43;CL:0000055!6.02e-09!50;CL:0000117!1.58e-08!23;CL:0000337!1.58e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-18,23;CL:0000337,1.68e-18,23;CL:0000540,1.02e-16,33;CL:0000047,1.02e-16,33;CL:0000031,1.02e-16,33;CL:0000404,1.02e-16,33;CL:0002319,5.22e-14,43;CL:0000393,1.08e-13,39;CL:0000211,1.08e-13,39;CL:0000221,1.28e-13,44;CL:0000133,1.28e-13,44;CL:0000120,3.39e-11,3;CL:0002608,1.73e-10,3;CL:0002609,6.25e-09,6;CL:0002321,1.10e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.88e-10!75;UBERON:0001016!1.88e-10!75;UBERON:0001017!2.90e-10!73;UBERON:0005743!2.90e-10!73;UBERON:0002346!8.30e-10!71;UBERON:0003075!8.30e-10!71;UBERON:0007284!8.30e-10!71;UBERON:0004121!2.09e-09!102;UBERON:0000924!2.09e-09!102;UBERON:0006601!2.09e-09!102;UBERON:0001049!6.92e-07!52;UBERON:0005068!6.92e-07!52;UBERON:0006241!6.92e-07!52;UBERON:0007135!6.92e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.64e-15,73;UBERON:0001016,1.52e-14,75;UBERON:0004121,8.49e-12,95;UBERON:0000924,8.49e-12,95;UBERON:0006601,8.49e-12,95;UBERON:0002346,1.25e-10,64;UBERON:0003075,1.25e-10,64;UBERON:0007284,1.25e-10,64;UBERON:0001049,1.44e-10,52;UBERON:0005068,1.44e-10,52;UBERON:0006241,1.44e-10,52;UBERON:0007135,1.44e-10,52;UBERON:0002020,2.06e-09,34;UBERON:0002240,6.25e-09,6;UBERON:0005174,6.25e-09,6;UBERON:0001137,6.25e-09,6;UBERON:0010371,6.86e-09,73;UBERON:0000073,1.35e-08,54;UBERON:0001954,1.08e-07,7;UBERON:0003022,1.08e-07,7;UBERON:0002421,1.08e-07,7;UBERON:0000349,1.08e-07,7;UBERON:0002600,1.08e-07,7|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.367093504323363,0,0.872100625521786,0,0.388859798148567,0,0,0,0,0,0,0.573066879877513,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0,0,0,0.599200221036809,1.15265491596466,0.414758449233911,1.4850653216486,0.841299845405528,0.571301968807607,1.76694832761291,1.22490799214954,1.91690942036473,1.83843757322004,0,0.255374676170375,0,1.18697658957174,1.82975287204819,0.52091337055676,0,0.56276261003168,0.61119299110724,0.883885756421003,1.42371680799103,1.86399445825301,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0,0.852151612890289,0.259786004602869,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0.608930956624282,0.230615497256059,0,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0.969750506270444,0,0.878342391034642,0.209446706813455,0,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.628271760564322,0,0,0,0.324482526135515,0.203678727700633,0.622034853050465,0.252722758433675,0.420883711772948,0.910843100738926,0.459804208866946,0.900310649026746,0.90422890701429,1.08858398642125,0.640568601424249,0.937017245597288,0,0.431135985865684,0.567318240503458,0.703804496655795,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0,0,0,0,0.420579897128254,1.74937841044784,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0,0.667134131534611,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0.569003702859245,0.456994050438915,0,0.203651327845314,0.387904974335251,0.420814919341911,0.126473074248515,0.147610147979602,0.31399745568275,0.246794327843601,0,1.16791574001266,0.393117990226406,1.12431056192427,1.01430060694251,0.482354319504834,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.814824882210129,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0.637819074629948,0,0,0.144649058581512,0,0,0,0,0.321101179975584,1.05490517932983,0,0.504941854408746,0.94652465824877,0.780877488593277,1.29254038639679,0.955875191810208,1.33679204449436,0.849229592366497,0,0.584511715822624,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.651547837414304,0.164970122972535,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.905510786479282,1.07168517515796,0.886701168211368,0.535106452806212,0.329098041204242,1.2178597964584,0,0,0,0,0,0.241251699712623,0,0,0,1.48340241608408,0.683483523191411,0,0.925972636848558,0.941842285023455,0.82016536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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217125 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=78bp_to_ENSMUST00000128512_5end | |||
|cluster_id=chr11:94871274..94871277,+ | |||
|description=CAGE_peak_15_at_Samd14_5end | |||
|id=chr11:94871274..94871277,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.34e-11!33;CL:0000047!5.34e-11!33;CL:0000031!5.34e-11!33;CL:0000404!5.34e-11!33;CL:0000393!2.39e-10!39;CL:0000211!2.39e-10!39;CL:0000221!5.86e-10!44;CL:0000133!5.86e-10!44;CL:0002319!8.69e-10!43;CL:0000055!6.02e-09!50;CL:0000117!1.58e-08!23;CL:0000337!1.58e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-18,23;CL:0000337,1.68e-18,23;CL:0000540,1.02e-16,33;CL:0000047,1.02e-16,33;CL:0000031,1.02e-16,33;CL:0000404,1.02e-16,33;CL:0002319,5.22e-14,43;CL:0000393,1.08e-13,39;CL:0000211,1.08e-13,39;CL:0000221,1.28e-13,44;CL:0000133,1.28e-13,44;CL:0000120,3.39e-11,3;CL:0002608,1.73e-10,3;CL:0002609,6.25e-09,6;CL:0002321,1.10e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.88e-10!75;UBERON:0001016!1.88e-10!75;UBERON:0001017!2.90e-10!73;UBERON:0005743!2.90e-10!73;UBERON:0002346!8.30e-10!71;UBERON:0003075!8.30e-10!71;UBERON:0007284!8.30e-10!71;UBERON:0004121!2.09e-09!102;UBERON:0000924!2.09e-09!102;UBERON:0006601!2.09e-09!102;UBERON:0001049!6.92e-07!52;UBERON:0005068!6.92e-07!52;UBERON:0006241!6.92e-07!52;UBERON:0007135!6.92e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.64e-15,73;UBERON:0001016,1.52e-14,75;UBERON:0004121,8.49e-12,95;UBERON:0000924,8.49e-12,95;UBERON:0006601,8.49e-12,95;UBERON:0002346,1.25e-10,64;UBERON:0003075,1.25e-10,64;UBERON:0007284,1.25e-10,64;UBERON:0001049,1.44e-10,52;UBERON:0005068,1.44e-10,52;UBERON:0006241,1.44e-10,52;UBERON:0007135,1.44e-10,52;UBERON:0002020,2.06e-09,34;UBERON:0002240,6.25e-09,6;UBERON:0005174,6.25e-09,6;UBERON:0001137,6.25e-09,6;UBERON:0010371,6.86e-09,73;UBERON:0000073,1.35e-08,54;UBERON:0001954,1.08e-07,7;UBERON:0003022,1.08e-07,7;UBERON:0002421,1.08e-07,7;UBERON:0000349,1.08e-07,7;UBERON:0002600,1.08e-07,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.367093504323363,0,0.872100625521786,0,0.388859798148567,0,0,0,0,0,0,0.573066879877513,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0,0,0,0.599200221036809,1.15265491596466,0.414758449233911,1.4850653216486,0.841299845405528,0.571301968807607,1.76694832761291,1.22490799214954,1.91690942036473,1.83843757322004,0,0.255374676170375,0,1.18697658957174,1.82975287204819,0.52091337055676,0,0.56276261003168,0.61119299110724,0.883885756421003,1.42371680799103,1.86399445825301,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0,0.852151612890289,0.259786004602869,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0.608930956624282,0.230615497256059,0,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0.969750506270444,0,0.878342391034642,0.209446706813455,0,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.628271760564322,0,0,0,0.324482526135515,0.203678727700633,0.622034853050465,0.252722758433675,0.420883711772948,0.910843100738926,0.459804208866946,0.900310649026746,0.90422890701429,1.08858398642125,0.640568601424249,0.937017245597288,0,0.431135985865684,0.567318240503458,0.703804496655795,0,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0,0,0,0,0.420579897128254,1.74937841044784,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0,0.667134131534611,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0.569003702859245,0.456994050438915,0,0.203651327845314,0.387904974335251,0.420814919341911,0.126473074248515,0.147610147979602,0.31399745568275,0.246794327843601,0,1.16791574001266,0.393117990226406,1.12431056192427,1.01430060694251,0.482354319504834,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.814824882210129,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0.637819074629948,0,0,0.144649058581512,0,0,0,0,0.321101179975584,1.05490517932983,0,0.504941854408746,0.94652465824877,0.780877488593277,1.29254038639679,0.955875191810208,1.33679204449436,0.849229592366497,0,0.584511715822624,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.651547837414304,0.164970122972535,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.905510786479282,1.07168517515796,0.886701168211368,0.535106452806212,0.329098041204242,1.2178597964584,0,0,0,0,0,0.241251699712623,0,0,0,1.48340241608408,0.683483523191411,0,0.925972636848558,0.941842285023455,0.820165366326151,0.686334519619568,0,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0,0.436725127492355,0.134864346384821,0.330613822901344,0,0,0,0,0.598066184175915,0,0.388902376688095,0.258319646955462,0.506868376472335,0.58678619322877,0,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0,0,0.36630324853453,0,0,1.12950368523413,0,0,0.171853182343688,0,0,0,0,0,0,0.726511433089237,1.19707462020309,0.341467211508268,0.729320151204882,1.67690530102386,0,0.666740183404846,0,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.320125762024346,0.574354689556133,0.952587382566147,0,0.77163688185482,0,0.441596760403192,1.37147700954166,0.177475806159338,0.715308569841963,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.593175090620871,0.492522411877817,0,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p15@Samd14 | |||
}} |
Revision as of 09:31, 4 August 2015
Short description: | p15@Samd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Samd14_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_ENSMUST00000128512_5end |
EntrezGene: | 217125 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.68e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.68e-18 | 23 |
neuron | 1.02e-16 | 33 |
neuronal stem cell | 1.02e-16 | 33 |
neuroblast | 1.02e-16 | 33 |
electrically signaling cell | 1.02e-16 | 33 |
neural cell | 5.22e-14 | 43 |
electrically responsive cell | 1.08e-13 | 39 |
electrically active cell | 1.08e-13 | 39 |
ectodermal cell | 1.28e-13 | 44 |
neurectodermal cell | 1.28e-13 | 44 |
granule cell | 3.39e-11 | 3 |
hippocampal neuron | 1.73e-10 | 3 |
neuron of cerebral cortex | 6.25e-09 | 6 |
embryonic cell | 1.10e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.64e-15 | 73 |
nervous system | 1.52e-14 | 75 |
ectoderm-derived structure | 8.49e-12 | 95 |
ectoderm | 8.49e-12 | 95 |
presumptive ectoderm | 8.49e-12 | 95 |
neurectoderm | 1.25e-10 | 64 |
neural plate | 1.25e-10 | 64 |
presumptive neural plate | 1.25e-10 | 64 |
neural tube | 1.44e-10 | 52 |
neural rod | 1.44e-10 | 52 |
future spinal cord | 1.44e-10 | 52 |
neural keel | 1.44e-10 | 52 |
gray matter | 2.06e-09 | 34 |
spinal cord | 6.25e-09 | 6 |
dorsal region element | 6.25e-09 | 6 |
dorsum | 6.25e-09 | 6 |
ecto-epithelium | 6.86e-09 | 73 |
regional part of nervous system | 1.35e-08 | 54 |
Ammon's horn | 1.08e-07 | 7 |
lobe parts of cerebral cortex | 1.08e-07 | 7 |
hippocampal formation | 1.08e-07 | 7 |
limbic system | 1.08e-07 | 7 |
limbic lobe | 1.08e-07 | 7 |