FFCP PHASE1:Hg19::chr3:114343826..114343869,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26137 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13503 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HC78,A8K251,B2RCW4 | |||
|association_with_transcript=-34bp_to_ENST00000393785,NM_001164346,uc010hqp.2_5end | |||
|description=CAGE_peak_4_at_ZBTB20_5end | |||
|id=chr3:114343826..114343869,- | |||
|ontology_enrichment_celltype=CL:0000222!5.36e-10!119;CL:0000213!1.26e-09!57;CL:0000215!1.26e-09!57;CL:0002078!1.63e-07!44;CL:0000115!8.34e-07!35 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.55e-10,58;CL:0000215,3.55e-10,58;CL:0002078,1.08e-07,45;CL:0000115,3.75e-07,36;CL:0000222,3.92e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!4.68e-24!286;UBERON:0004111!2.82e-19!241;UBERON:0000025!1.51e-18!194;UBERON:0000475!4.44e-18!365;UBERON:0007023!4.48e-17!115;UBERON:0000119!6.92e-17!312;UBERON:0000483!7.87e-17!309;UBERON:0000955!1.19e-15!69;UBERON:0006238!1.19e-15!69;UBERON:0003075!1.86e-14!86;UBERON:0007284!1.86e-14!86;UBERON:0002616!2.25e-14!59;UBERON:0001049!5.15e-14!57;UBERON:0005068!5.15e-14!57;UBERON:0006241!5.15e-14!57;UBERON:0007135!5.15e-14!57;UBERON:0005743!6.90e-14!86;UBERON:0001017!8.32e-14!82;UBERON:0000073!2.34e-13!94;UBERON:0001016!2.34e-13!94;UBERON:0000481!2.36e-13!347;UBERON:0000033!2.41e-13!123;UBERON:0002346!1.26e-12!90;UBERON:0000153!1.31e-12!129;UBERON:0007811!1.31e-12!129;UBERON:0000467!1.39e-12!625;UBERON:0000480!2.36e-12!626;UBERON:0000468!3.14e-12!659;UBERON:0000062!1.01e-10!511;UBERON:0003080!2.58e-10!42;UBERON:0002780!3.19e-10!41;UBERON:0001890!3.19e-10!41;UBERON:0006240!3.19e-10!41;UBERON:0003056!7.39e-10!61;UBERON:0004121!7.76e-10!169;UBERON:0000924!7.23e-09!173;UBERON:0006601!7.23e-09!173;UBERON:0002020!5.17e-08!34;UBERON:0003528!5.17e-08!34;UBERON:0001893!6.97e-08!34;UBERON:0000064!7.83e-08!219;UBERON:0002791!1.31e-07!33;UBERON:0003914!4.86e-07!118;UBERON:0001869!6.62e-07!32;UBERON:0005256!6.73e-07!143;UBERON:0000923!7.06e-07!604;UBERON:0005291!7.06e-07!604;UBERON:0006598!7.06e-07!604;UBERON:0002532!7.06e-07!604;UBERON:0002050!7.13e-07!605;UBERON:0005423!7.13e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.86e-08;41!UBERON:0001890;9.86e-08;41!UBERON:0000073;1.04e-07;53!UBERON:0002616;1.04e-07;53!UBERON:0001017;4.53e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.31e-16,68;UBERON:0006238,2.31e-16,68;UBERON:0007023,2.39e-16,114;UBERON:0010314,1.86e-15,132;UBERON:0004111,8.10e-15,240;UBERON:0000025,1.97e-14,192;UBERON:0001017,2.60e-14,81;UBERON:0003075,3.98e-14,82;UBERON:0007284,3.98e-14,82;UBERON:0001049,7.65e-14,56;UBERON:0005068,7.65e-14,56;UBERON:0006241,7.65e-14,56;UBERON:0007135,7.65e-14,56;UBERON:0001016,1.40e-13,89;UBERON:0000073,3.13e-13,53;UBERON:0002616,3.13e-13,53;UBERON:0002346,2.53e-12,86;UBERON:0000483,3.79e-12,306;UBERON:0000119,5.06e-12,309;UBERON:0002780,1.34e-10,41;UBERON:0001890,1.34e-10,41;UBERON:0003080,1.34e-10,41;UBERON:0006240,1.34e-10,41;UBERON:0003056,2.74e-10,61;UBERON:0004121,1.19e-08,171;UBERON:0000924,1.19e-08,171;UBERON:0006601,1.19e-08,171;UBERON:0011216,2.82e-08,223;UBERON:0003528,3.28e-08,34;UBERON:0002020,3.28e-08,34;UBERON:0001893,4.50e-08,34;UBERON:0010371,4.66e-08,104;UBERON:0002791,2.79e-07,32;UBERON:0001869,5.00e-07,32 | |||
|phase1_expression=3.27021082687002,2.99740733447376,1.69145284915165,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,0,2.87304191019822,0.245733936501509,1.39560233594486,0,0,0.866364470720326,1.65698687863958,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,1.23121058076788,1.02000345622126,1.25381888591235,5.15224776835902,6.29622355335267,2.76193807108566,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,5.59788685599811,4.85840499028469,10.8181738406358,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,7.31420598941885,0,0.12786256184353,1.0843174571537,1.50401373190767,1.01392563272577,0.795285947051099,1.94653948121054,5.67208902984407,3.76939975686359,3.68906099911129,2.88153966094968,0,0,0,0.174129737299267,0.132957960518865,0,0,0,2.78267370313387,0.860234595106124,1.73570250803797,1.69592382577203,1.25849830862972,1.6507082516404,1.04497483268405,9.56142008926517,9.96145535522789,14.3929863488808,1.61131726843659,2.28081631715554,1.95249646038536,1.83831540172934,1.62028389576352,5.71518261018111,6.06229306090659,5.40535106319947,1.53316637465883,1.89853131913626,1.09921046358244,0,0,0,0.496971951695318,1.01304409331664,6.48804985984772,3.72887606973458,2.12801029319014,1.12135520028461,2.1349799145941,0.74000264525148,3.42332138939743,1.48181739276657,3.10577615915572,3.63257826347835,2.30470369792,2.81185718200556,0,0,0.149448680551801,1.40921398372518,0.485618833104395,0.421352420106746,4.89970011011744,2.45668634623536,4.02970546585485,1.18800285728205,4.45080472701402,0,0.718618141816238,4.88174730466792,3.37820003654303,6.64953877162039,2.63386572528503,2.14541457059314,2.70428506031874,0.907457465280168,5.02290979928813,3.41691822109708,1.27159140695737,0.900273288253207,1.8549455262919,2.06112432036503,2.79175284497385,3.37552664482532,2.33848812386877,3.78650661366172,3.03764665519588,1.77810662500693,4.61512470271599,1.71278566986988,1.3564847384839,0,0,0,0,0,0,0.414644220061482,0.252320850875628,0,3.12899064659632,1.28648187638577,2.76269842704961,0.464367928031979,0,1.53798840051797,1.85443159085912,0.964044119533928,1.54411561825352,1.52515610864684,1.18635309555548,1.48314438976181,1.37355025587742,1.15424147083917,3.69077727312324,2.80483547606892,1.6462960453256,0,1.26755034821831,0,0,0,0.368965315629341,0.857839051492628,0.109750285408626,0,0,0,1.62904152655162,2.07986957055916,1.44331342025273,1.27523445472584,2.46558257895225,3.60916119402685,2.77791307545966,5.70762456703795,0,0,1.72351904261178,0,1.78357394746474,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0.144119953416961,0,0,0,0,1.71072446022705,0.205654985406647,0,0,1.45770409648969,1.30788020649984,0.8800594298514,2.71470603091333,0,0.845302752556,6.11657668145202,4.16029747645464,0.771622122786426,0,0.532844358032199,1.71573592389777,0,2.46972101034231,0.977208552881205,1.42156779497018,0,3.91871190177462,2.61460037580088,2.89921674427965,0,1.50677127429638,0,2.39624855491583,0,0,3.04040744001916,2.26023954805422,3.76028022803781,0,0,0,0,3.04913549066956,1.30139853857622,0,0.502548796003046,0,0,0,0,2.4538298343828,0.500170521059677,0.542530047399471,2.70362119990049,3.03329280955175,3.31175071571263,4.80279801470124,0,0,1.03473071292505,1.32845119707087,0.553107505625109,1.99832313276591,2.34961388955289,2.05886054286514,0,0,0,0,0,0,1.24053903909388,3.52962538562544,0.280660094433074,1.79394808957981,1.02341449813341,1.76939313257968,0,0.308419387605311,0,1.06765302817952,0.519254429183621,0.813472649219715,0,0.200506470303285,0,2.41110341145674,0.910455840033585,3.01586154406675,2.70719767744447,1.61732207919271,5.49044838423799,1.46139224653261,1.37217117560738,0,2.04112446331819,2.59099099322567,4.62681758070868,2.43851793789468,1.00337954770971,3.3133915495855,1.66215201785745,2.46262230194396,0,0,1.28225062558195,0.328014645699706,1.30151357865721,2.47298427954533,12.1787388208397,13.7790864867382,0.574265537996172,0,0,3.48014585851639,2.31072925671967,3.07007349452259,1.92971201478343,3.86712881525785,2.90033387828457,3.23861184181183,5.87611435268467,0,0,0,0,0.929691098594572,2.51849877464512,1.3940745403212,2.46426864140871,0.532306030317022,0.869932992075073,0.37064843820784,0.715624433709956,3.72158369359667,4.42931194606216,2.09693213316207,0.767693373934002,1.28381696410176,0.318203247925937,2.35484592059769,4.8565563547495,3.56898138656871,1.7671860351853,0.202182481573316,0,1.68503382495592,1.46290121726877,0.243713489631284,1.05650146756755,1.9109987597118,1.97967604735198,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0.655894752046633,0.811641507850816,0,0.845086807596724,1.00387946542836,0.88424136911809,0.7133421029625,1.77380532035299,1.47775344708365,0.987884678879706,1.51789269506286,1.04980416073495,0,0,0,2.07116361708914,0,0,0,0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70118471424834,2.73786640868225,0.80822463617505,1.36272190246085,0.99798106963804,5.29121245971334,4.1623664892309,1.9307228228694,4.58108530743593,2.34640942403454,3.91172621385173,0.813792356631477,9.32059483859718,2.81783311027437,0 | |||
|short_description=p4@ZBTB20 | |||
}} |
Revision as of 20:39, 21 January 2014
Short description: | p4@ZBTB20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZBTB20_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENST00000393785, NM_001164346, uc010hqp.2_5end |
EntrezGene: | ZBTB20 |
HGNC: | 13503 |
UniProt: | Q9HC78A8K251B2RCW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.55e-10 | 58 |
barrier cell | 3.55e-10 | 58 |
meso-epithelial cell | 1.08e-07 | 45 |
endothelial cell | 3.75e-07 | 36 |
mesodermal cell | 3.92e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
brain | 2.31e-16 | 68 |
future brain | 2.31e-16 | 68 |
adult organism | 2.39e-16 | 114 |
structure with developmental contribution from neural crest | 1.86e-15 | 132 |
anatomical conduit | 8.10e-15 | 240 |
tube | 1.97e-14 | 192 |
central nervous system | 2.60e-14 | 81 |
neural plate | 3.98e-14 | 82 |
presumptive neural plate | 3.98e-14 | 82 |
neural tube | 7.65e-14 | 56 |
neural rod | 7.65e-14 | 56 |
future spinal cord | 7.65e-14 | 56 |
neural keel | 7.65e-14 | 56 |
nervous system | 1.40e-13 | 89 |
regional part of nervous system | 3.13e-13 | 53 |
regional part of brain | 3.13e-13 | 53 |
neurectoderm | 2.53e-12 | 86 |
epithelium | 3.79e-12 | 306 |
cell layer | 5.06e-12 | 309 |
regional part of forebrain | 1.34e-10 | 41 |
forebrain | 1.34e-10 | 41 |
anterior neural tube | 1.34e-10 | 41 |
future forebrain | 1.34e-10 | 41 |
pre-chordal neural plate | 2.74e-10 | 61 |
ectoderm-derived structure | 1.19e-08 | 171 |
ectoderm | 1.19e-08 | 171 |
presumptive ectoderm | 1.19e-08 | 171 |
organ system subdivision | 2.82e-08 | 223 |
brain grey matter | 3.28e-08 | 34 |
gray matter | 3.28e-08 | 34 |
telencephalon | 4.50e-08 | 34 |
ecto-epithelium | 4.66e-08 | 104 |
regional part of telencephalon | 2.79e-07 | 32 |
cerebral hemisphere | 5.00e-07 | 32 |