FFCP PHASE1:Hg19::chr3:111578558..111578576,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90102 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29573 | |||
|TSSclassifier=strong | |||
|UniProt=Q86SQ0 | |||
|association_with_transcript=0bp_to_NM_001134439,uc003dye.3,uc003dyf.3,uc003dyg.2_5end | |||
|coexpression_cluster_id=C4265 | |||
|description=CAGE_peak_6_at_PHLDB2_5end | |||
|id=chr3:111578558..111578576,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.67e-11!180;CL:0000222!7.68e-08!119;CL:0000680!2.83e-07!57;CL:0000056!2.83e-07!57;CL:0000355!2.83e-07!57;CL:0000393!3.84e-07!60;CL:0000211!3.84e-07!60;CL:0000187!5.85e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.14e-08,121;CL:0000680,7.59e-07,58;CL:0000056,7.59e-07,58;CL:0000355,7.59e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.90e-13!84;UBERON:0001009!1.01e-12!113;UBERON:0004535!9.75e-12!110;UBERON:0002049!1.30e-11!79;UBERON:0007798!1.30e-11!79;UBERON:0000490!3.78e-10!138;UBERON:0001981!2.94e-09!60;UBERON:0007500!2.94e-09!60;UBERON:0004537!2.94e-09!60;UBERON:0006965!2.94e-09!60;UBERON:0003914!3.44e-09!118;UBERON:0000055!3.77e-09!69;UBERON:0000481!2.02e-08!347;UBERON:0000477!5.10e-08!286;UBERON:0002385!7.85e-08!63;UBERON:0001015!7.85e-08!63;UBERON:0000383!7.85e-08!63;UBERON:0003104!8.17e-08!238;UBERON:0009142!8.17e-08!238;UBERON:0000468!8.36e-08!659;UBERON:0007100!1.71e-07!27;UBERON:0000914!1.85e-07!83;UBERON:0002329!1.85e-07!83;UBERON:0003077!1.85e-07!83;UBERON:0003059!1.85e-07!83;UBERON:0007282!1.85e-07!83;UBERON:0009618!1.85e-07!83;UBERON:0007285!1.85e-07!83;UBERON:0001134!1.99e-07!61;UBERON:0002036!1.99e-07!61;UBERON:0003082!1.99e-07!61;UBERON:0004290!2.84e-07!70;UBERON:0001048!5.83e-07!168;UBERON:0002323!8.27e-07!46;UBERON:0002100!8.43e-07!216;UBERON:0000119!8.49e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.41e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.40e-14,83;UBERON:0001009,1.53e-12,112;UBERON:0002049,4.62e-12,78;UBERON:0007798,4.62e-12,78;UBERON:0004535,2.23e-11,109;UBERON:0007500,6.14e-10,59;UBERON:0001981,6.14e-10,59;UBERON:0004537,6.14e-10,59;UBERON:0006965,6.14e-10,59;UBERON:0000055,1.07e-09,68;UBERON:0003914,2.30e-09,117;UBERON:0000490,4.57e-09,148;UBERON:0007100,9.60e-08,27;UBERON:0002385,1.66e-07,64;UBERON:0001015,1.66e-07,64;UBERON:0000383,1.66e-07,64;UBERON:0001134,2.76e-07,62;UBERON:0002036,2.76e-07,62;UBERON:0003082,2.76e-07,62;UBERON:0002329,8.18e-07,71;UBERON:0003059,8.18e-07,71;UBERON:0007282,8.18e-07,71;UBERON:0004290,8.18e-07,71;UBERON:0009618,8.18e-07,71 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.845726424575827,2.00146596706261,2.23480547213644,0,0,0,1.30592814099919,0.491467873003018,0,1.96597234917155,0.527533956456907,1.11389717664042,2.31978163009541,0.672325146451775,3.01347264011988,1.46062018077475,0.487932798790507,0.492484232307152,1.42800483870977,0.626909442956176,0.572471974262113,0.547497700291537,0.87879847716362,0.61130724598361,0.410502947249729,0.472264687882075,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0.853460445133014,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0.393419540227666,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0.443067789167242,0,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0.766440987203842,1.03088233644789,0.253019692019503,0,0,0,0.301150238155546,0.639933055772092,0,0.236777252044017,0.821127996921047,0,0.534880391567015,0.434473211648397,12.1903433156981,0.670700859703636,1.79007586580942,0,1.00267582127178,0.434539556882471,0,0,2.55244006342983,3.54767035940102,3.86473057049755,1.37528029272598,0,0.370784442784429,0,0,0.132957960518865,0,0,0,2.18638648103376,0,2.08284300964557,1.13061588384802,1.25849830862972,1.10047216776027,1.8809546988313,1.29208379584664,2.49036383880697,4.68608857870538,0.402829317109147,2.28081631715554,1.70843440283719,2.20597848207521,0,2.58969212023831,2.69435247151404,3.49095589498299,3.06633274931766,1.89853131913626,1.09921046358244,0,0,0,2.98183171017191,2.27934920996244,6.22323149822128,6.02356903572509,1.77334191099179,2.24271040056923,1.06748995729705,1.72667283892012,2.48968828319813,2.2900814251847,1.30769522490767,0.756787138224657,0.576175924479999,0.234321431833797,1.24864030732128,0,0.597794722207204,1.40921398372518,1.61872944368132,0.842704840213491,0.61246251376468,0.859840221182376,0.619954687054593,4.75201142912821,1.23633464639278,1.82032272387605,0,0.505008341862199,0.875829639103749,0.277064115484183,0.877955241761676,1.22595118319608,1.35214253015937,1.24775401476023,1.25572744982203,2.13557388818567,0.847727604638247,1.20036438433761,1.33968288009971,2.31876486041066,0.37223371266318,1.68776332241266,1.46155507741798,2.52433774244115,1.01254888506529,1.93975268182574,1.06502877754984,1.81353776809752,1.18692414617341,0.57978255948989,0.545492241181669,1.43402297694502,0.609868530647977,0.927708378250397,0.232387885739037,0.725627385107593,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0.464367928031979,1.44375896333917,0.236613600079688,0.505754070234305,0.241011029883482,0.55146986366197,0.653638332277218,0.71181185733329,0.404493924480493,0.588664395376038,1.15424147083917,0,0,0.8231480226628,0,0,0,0,0.441463099414651,0,2.57351715447788,0.109750285408626,1.1240175325762,0.603173834469785,0.555530670951178,0.325808305310325,1.03993478527958,2.88662684050547,0.34779121492523,4.69634776943287,0.577465791044295,0,0.761016608938393,0,0,0,0,0,0,1.00789276919316,0.992425680696705,1.88072897675981,0.871901815541886,1.15014803749563,0,0,0,0,0.12624243342638,1.52394946301206,1.14596527667483,0,0,1.13110241973656,0.300343057843917,0.571652865261156,0.672786506072164,0.43596006883328,1.0267360014933,0.387815147273333,3.57656445851882,1.690605505112,1.06375246633948,1.04007436911366,1.02882949704857,0,0.532844358032199,2.85955987316295,0,0.823240336780769,0.65147236858747,2.13235169245527,0.791951872933429,1.80863626235752,0.871533458600294,1.89948683245908,0,0,0,2.39624855491583,1.14861935834114,0,0.579125226670317,1.43833425785268,1.43248770591916,0.784596007954691,0.591092280605782,0.862510299438069,0.256686072559497,0,0,0.773288812777695,0.502548796003046,0,0,0,0,2.69921281782108,0.500170521059677,1.89885516589815,0.831883446123229,0.892144943985809,0.946214490203608,2.34282829985426,1.20378439891088,0,2.0694614258501,3.32112799267718,1.29058417979192,1.47702144595741,0.195801157462741,0.343143423810856,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0.604780586659361,0.248107807818777,1.53461973288062,0.280660094433074,1.02511319404561,2.55853624533352,0.965123526861645,1.48418066444991,1.07946785661859,0.355123450626254,1.64254312027618,0,0.813472649219715,0.120859449591622,0.200506470303285,0,1.14814448164607,0.728364672026868,0.917870904715969,0,0.539107359730903,0,0,1.05551628892876,0,0.510281115829547,1.72732732881711,0,0,0.501689773854853,0.254876273045038,0,0.895499018888713,0,0,0.512900250232778,0.984043937099117,0.976135183992909,3.29731237272711,0.0915694648183434,0,0,0,1.6068392984416,0.96670718292122,3.08097234229289,2.6095624703442,1.10269257987624,2.36324538710202,0.870100163485371,1.87498580315422,0.979352392114111,0.165284915360978,0,0.510450849978337,0.4046311234222,0.929691098594572,2.20368642781448,1.3940745403212,2.15623506123262,1.06461206063404,1.73986598415015,1.48259375283136,2.14687330112987,1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| |||
|short_description=p6@PHLDB2 | |||
}} |
Revision as of 20:28, 21 January 2014
Short description: | p6@PHLDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PHLDB2_5end |
Coexpression cluster: | C4265_heart_Fibroblast_Endothelial_smooth_mesodermal_Ciliary_mature |
Association with transcript: | 0bp_to_NM_001134439, uc003dye.3, uc003dyf.3, uc003dyg.2_5end |
EntrezGene: | PHLDB2 |
HGNC: | 29573 |
UniProt: | Q86SQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.14e-08 | 121 |
muscle precursor cell | 7.59e-07 | 58 |
myoblast | 7.59e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.59e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 4.40e-14 | 83 |
circulatory system | 1.53e-12 | 112 |
vasculature | 4.62e-12 | 78 |
vascular system | 4.62e-12 | 78 |
cardiovascular system | 2.23e-11 | 109 |
epithelial tube open at both ends | 6.14e-10 | 59 |
blood vessel | 6.14e-10 | 59 |
blood vasculature | 6.14e-10 | 59 |
vascular cord | 6.14e-10 | 59 |
vessel | 1.07e-09 | 68 |
epithelial tube | 2.30e-09 | 117 |
unilaminar epithelium | 4.57e-09 | 148 |
primary circulatory organ | 9.60e-08 | 27 |
muscle tissue | 1.66e-07 | 64 |
musculature | 1.66e-07 | 64 |
musculature of body | 1.66e-07 | 64 |
skeletal muscle tissue | 2.76e-07 | 62 |
striated muscle tissue | 2.76e-07 | 62 |
myotome | 2.76e-07 | 62 |
somite | 8.18e-07 | 71 |
presomitic mesoderm | 8.18e-07 | 71 |
presumptive segmental plate | 8.18e-07 | 71 |
dermomyotome | 8.18e-07 | 71 |
trunk paraxial mesoderm | 8.18e-07 | 71 |