FFCP PHASE1:Mm9::chr11:70053296..70053362,-: Difference between revisions
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{{FFCP|EntrezGene=52898,104457|HGNC=|MCL_coexpression_id=2709|UniProt=Q8K3C0,A2CF78|association_with_transcript=0bp_to_ENSMUST00000040428,NM_173742,uc007juf.2,uc007jui.2_5end|description=CAGE_peak_1_at_0610010K14Rik_5end,CAGE_peak_1_at_Rnasek_5end|id=chr11:70053296..70053362,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.66e-16!51;UBERON:0000955!4.83e-10!50;UBERON:0006238!4.83e-10!50;UBERON:0000073!8.98e-10!75;UBERON:0001016!8.98e-10!75;UBERON:0001049!9.91e-10!52;UBERON:0005068!9.91e-10!52;UBERON:0006241!9.91e-10!52;UBERON:0007135!9.91e-10!52;UBERON:0002616!1.34e-09!49;UBERON:0004121!2.47e-09!102;UBERON:0000924!2.47e-09!102;UBERON:0006601!2.47e-09!102;UBERON:0001017!4.00e-09!73;UBERON:0005743!4.00e-09!73;UBERON:0004111!2.31e-08!122;UBERON:0000033!2.39e-07!63;UBERON:0000025!5.99e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.66e-16,51;UBERON:0000073,1.93e-10,54;UBERON:0001016,8.98e-10,75;UBERON:0001049,9.91e-10,52;UBERON:0005068,9.91e-10,52;UBERON:0006241,9.91e-10,52;UBERON:0007135,9.91e-10,52;UBERON:0001017,4.00e-09,73;UBERON:0000955,7.24e-09,47;UBERON:0006238,7.24e-09,47;UBERON:0002616,1.93e-08,46;UBERON:0004111,2.31e-08,122;UBERON:0004121,2.83e-08,95;UBERON:0000924,2.83e-08,95;UBERON:0006601,2.83e-08,95;UBERON:0000025,5.99e-07,114|phase1_expression=156.305274774279,228.229916596142,223.859625779652,129.152218228016,124.72303675664,132.792504082305,147.409576215777,196.654821601521,75.603543795445,91.9873588445434,67.2886615126235,71.7151709368074,162.640693434645,202.29081119756,92.9376235465699,115.613377679591,118.225957403657,141.011587915132,124.637020147617,147.263209173916,326.651277470259,197.191829084958,141.831485502442,252.468043167996,265.88535675685,307.214100801536,266.210913626308,273.648465511079,340.141920826909,259.086973393209,331.265382919025,202.574784833622,260.172405148273,79.2408405077194,98.2095507154334,109.216162000529,97.7971216496748,631.982762412731,581.313496325708,465.412608392707,694.701387364628,704.902940477116,578.242830460104,369.633057576295,351.372443606837,289.086134654648,791.780040480216,340.991344579018,391.700463815563,426.384768669904,258.414934320419,286.067603086293,174.661692906104,132.741271988076,129.396112669849,228.446379199921,205.444476436089,233.599457801681,250.872411465901,290.945038599618,236.419113507805,277.513671764619,252.559722095564,841.406235658108,1211.36129414454,971.936797246265,505.12578633403,576.711676287653,134.589116776404,160.52206067638,159.005670781645,348.208549988237,329.977600181711,160.830419369235,129.103849461564,137.882817991503,384.304424687867,414.217724748349,419.653048856057,229.086481787347,228.536133718819,207.844434852147,536.310541081653,516.616076009082,438.683769367222,252.20206916546,272.784140411081,235.981698414831,349.476382232644,398.7155511234,213.630128173137,304.590052451411,300.547329498826,313.567554341572,310.593127539986,302.866175677799,412.06392866656,380.400479994225,289.661395132199,229.317383857211,210.842599405691,132.176271736747,38.2207859559969,21.3320010945999,158.254950979198,149.735680495783,147.107613499302,295.393696833208,277.322473386121,301.782868718789,165.67848706166,316.644097444627,321.016772180433,318.929107409349,273.864098919057,258.119178591153,326.297357409374,353.979225739944,234.421796266717,185.870110589573,192.132121060542,215.769487645174,415.653627516412,404.330280672947,345.587066242201,243.450573613788,144.017779656116,181.770527491003,181.837494941556,488.317484459722,367.372984063357,179.308760465058,554.847230053746,418.606203649751,507.626192859005,407.874535352343,109.884673594491,294.09807852226,565.593533374564,313.768807126733,92.5156349464823,126.216255333977,139.36808846934,126.290637346329,122.669807969844,142.206229516183,139.147060971197,256.375040402365,88.814013088331,72.6167347844426,79.002054749613,102.802798508533,113.443277684044,166.464535597596,173.474340991896,90.3615571355959,181.171002326815,219.517764768852,171.634753634938,141.259776869212,162.292033506919,137.567414956215,155.067801808313,151.508458445501,171.699296643652,150.449462253514,159.354400431374,154.830843978867,163.243371114173,224.416923396123,261.852254833114,256.142377969182,285.854250108948,262.507755095287,550.328795392321,258.187672459625,378.990344082416,235.889905463881,87.6614709699812,73.619024979759,96.1351261462816,179.094969865528,250.842433457014,366.374555892789,211.639961448852,451.110436989066,269.934014251489,289.083753875792,284.842531281034,206.728463990471,224.999709919557,243.9480597366,148.32029854531,95.5117565417333,143.138824304812,145.407048081554,158.071277041615,154.08839629903,232.141327783149,329.318240142492,382.919897205113,391.169009632108,404.361383346871,161.172372121747,136.805060598789,163.924479928558,172.02538293745,173.406377861988,228.654014899715,228.718429273394,219.855367506948,183.407024009638,106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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:52898,entrezgene:104457 | |||
|HGNC= | |||
|MCL_coexpression_id=2709 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K3C0,uniprot:A2CF78 | |||
|association_with_transcript=0bp_to_ENSMUST00000040428,NM_173742,uc007juf.2,uc007jui.2_5end | |||
|cluster_id=chr11:70053296..70053362,- | |||
|description=CAGE_peak_1_at_0610010K14Rik_5end,CAGE_peak_1_at_Rnasek_5end | |||
|id=chr11:70053296..70053362,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.66e-16!51;UBERON:0000955!4.83e-10!50;UBERON:0006238!4.83e-10!50;UBERON:0000073!8.98e-10!75;UBERON:0001016!8.98e-10!75;UBERON:0001049!9.91e-10!52;UBERON:0005068!9.91e-10!52;UBERON:0006241!9.91e-10!52;UBERON:0007135!9.91e-10!52;UBERON:0002616!1.34e-09!49;UBERON:0004121!2.47e-09!102;UBERON:0000924!2.47e-09!102;UBERON:0006601!2.47e-09!102;UBERON:0001017!4.00e-09!73;UBERON:0005743!4.00e-09!73;UBERON:0004111!2.31e-08!122;UBERON:0000033!2.39e-07!63;UBERON:0000025!5.99e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.66e-16,51;UBERON:0000073,1.93e-10,54;UBERON:0001016,8.98e-10,75;UBERON:0001049,9.91e-10,52;UBERON:0005068,9.91e-10,52;UBERON:0006241,9.91e-10,52;UBERON:0007135,9.91e-10,52;UBERON:0001017,4.00e-09,73;UBERON:0000955,7.24e-09,47;UBERON:0006238,7.24e-09,47;UBERON:0002616,1.93e-08,46;UBERON:0004111,2.31e-08,122;UBERON:0004121,2.83e-08,95;UBERON:0000924,2.83e-08,95;UBERON:0006601,2.83e-08,95;UBERON:0000025,5.99e-07,114 | |||
|phase1_expression=156.305274774279,228.229916596142,223.859625779652,129.152218228016,124.72303675664,132.792504082305,147.409576215777,196.654821601521,75.603543795445,91.9873588445434,67.2886615126235,71.7151709368074,162.640693434645,202.29081119756,92.9376235465699,115.613377679591,118.225957403657,141.011587915132,124.637020147617,147.263209173916,326.651277470259,197.191829084958,141.831485502442,252.468043167996,265.88535675685,307.214100801536,266.210913626308,273.648465511079,340.141920826909,259.086973393209,331.265382919025,202.574784833622,260.172405148273,79.2408405077194,98.2095507154334,109.216162000529,97.7971216496748,631.982762412731,581.313496325708,465.412608392707,694.701387364628,704.902940477116,578.242830460104,369.633057576295,351.372443606837,289.086134654648,791.780040480216,340.991344579018,391.700463815563,426.384768669904,258.414934320419,286.067603086293,174.661692906104,132.741271988076,129.396112669849,228.446379199921,205.444476436089,233.599457801681,250.872411465901,290.945038599618,236.419113507805,277.513671764619,252.559722095564,841.406235658108,1211.36129414454,971.936797246265,505.12578633403,576.711676287653,134.589116776404,160.52206067638,159.005670781645,348.208549988237,329.977600181711,160.830419369235,129.103849461564,137.882817991503,384.304424687867,414.217724748349,419.653048856057,229.086481787347,228.536133718819,207.844434852147,536.310541081653,516.616076009082,438.683769367222,252.20206916546,272.784140411081,235.981698414831,349.476382232644,398.7155511234,213.630128173137,304.590052451411,300.547329498826,313.567554341572,310.593127539986,302.866175677799,412.06392866656,380.400479994225,289.661395132199,229.317383857211,210.842599405691,132.176271736747,38.2207859559969,21.3320010945999,158.254950979198,149.735680495783,147.107613499302,295.393696833208,277.322473386121,301.782868718789,165.67848706166,316.644097444627,321.016772180433,318.929107409349,273.864098919057,258.119178591153,326.297357409374,353.979225739944,234.421796266717,185.870110589573,192.132121060542,215.769487645174,415.653627516412,404.330280672947,345.587066242201,243.450573613788,144.017779656116,181.770527491003,181.837494941556,488.317484459722,367.372984063357,179.308760465058,554.847230053746,418.606203649751,507.626192859005,407.874535352343,109.884673594491,294.09807852226,565.593533374564,313.768807126733,92.5156349464823,126.216255333977,139.36808846934,126.290637346329,122.669807969844,142.206229516183,139.147060971197,256.375040402365,88.814013088331,72.6167347844426,79.002054749613,102.802798508533,113.443277684044,166.464535597596,173.474340991896,90.3615571355959,181.171002326815,219.517764768852,171.634753634938,141.259776869212,162.292033506919,137.567414956215,155.067801808313,151.508458445501,171.699296643652,150.449462253514,159.354400431374,154.830843978867,163.243371114173,224.416923396123,261.852254833114,256.142377969182,285.854250108948,262.507755095287,550.328795392321,258.187672459625,378.990344082416,235.889905463881,87.6614709699812,73.619024979759,96.1351261462816,179.094969865528,250.842433457014,366.374555892789,211.639961448852,451.110436989066,269.934014251489,289.083753875792,284.842531281034,206.728463990471,224.999709919557,243.9480597366,148.32029854531,95.5117565417333,143.138824304812,145.407048081554,158.071277041615,154.08839629903,232.141327783149,329.318240142492,382.919897205113,391.169009632108,404.361383346871,161.172372121747,136.805060598789,163.924479928558,172.02538293745,173.406377861988,228.654014899715,228.718429273394,219.855367506948,183.407024009638,106.388472830242,168.951990241501,185.350377830049,223.532306983194,275.913221996701,339.640239039811,291.725287273069,86.4080837673411,74.3120292575638,83.3448371156174,108.192204460999,166.166207382281,233.282768068293,179.327822381317,198.620281573801,192.231350615137,166.949142784389,216.791165368921,208.430773112136,226.954372914392,275.948049608868,447.090472098979,294.566799538403,282.559228216046,520.344462150434,486.311287671051,209.672795136768,329.474560001707,124.941254888838,138.21531548101,142.39486590138,131.193870075951,155.067877161346,116.34445415421,153.01844523311,197.564959948047,154.952808955037,439.24623954861,265.286019254254,129.987890677096,100.012593043096,249.269855811501,394.25306086969,131.587104796,134.836306406279,264.990137057037,435.274990106259,351.398374099909,232.068607265063,158.500706052192,172.544731138205,338.159330991323,414.295131699745,403.259974100411,365.291696973815,83.1882254424653,152.125812128519,154.322665222746,201.458505417623,265.769538227085,267.556707499049,513.0234392581,356.935667964903,490.391244049744,553.526279117954,219.298716412168,205.221286330496,165.679604777644,188.130814148943,186.46406211039,204.911028150785,492.118751535893,212.050763070135,137.04088032758,137.599533835696,172.357138159292,139.97488918633,134.064009499022,104.536734446221,118.678831570462,117.746377681369,585.213088843265,80.8238463599801,9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| |||
|short_description=p1@0610010K14Rik,p1@Rnasek | |||
}} |
Revision as of 20:56, 3 August 2015
Short description: | p1@0610010K14Rik, p1@Rnasek |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_0610010K14Rik_5end, CAGE_peak_1_at_Rnasek_5end |
Coexpression cluster: | MCL_coexpression_mm9:2709 |
Association with transcript: | 0bp_to_ENSMUST00000040428, NM_173742, uc007juf.2, uc007jui.2_5end |
EntrezGene: | 52898,104457 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.66e-16 | 51 |
regional part of nervous system | 1.93e-10 | 54 |
nervous system | 8.98e-10 | 75 |
neural tube | 9.91e-10 | 52 |
neural rod | 9.91e-10 | 52 |
future spinal cord | 9.91e-10 | 52 |
neural keel | 9.91e-10 | 52 |
central nervous system | 4.00e-09 | 73 |
brain | 7.24e-09 | 47 |
future brain | 7.24e-09 | 47 |
regional part of brain | 1.93e-08 | 46 |
anatomical conduit | 2.31e-08 | 122 |
ectoderm-derived structure | 2.83e-08 | 95 |
ectoderm | 2.83e-08 | 95 |
presumptive ectoderm | 2.83e-08 | 95 |
tube | 5.99e-07 | 114 |