FFCP PHASE1:Hg19::chr3:107241792..107241845,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14422 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WY36,C9JA69 | |||
|association_with_transcript=0bp_to_ENST00000325805,ENST00000402543,ENST00000474137,ENST00000485939_5end | |||
|description=CAGE_peak_1_at_BBX_5end | |||
|id=chr3:107241792..107241845,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.88e-08!52;CL:0000542!6.58e-08!53;CL:0000051!6.58e-08!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.88e-08,52;CL:0000542,6.58e-08,53;CL:0000051,6.58e-08,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.60e-22!115;UBERON:0001049!1.64e-11!57;UBERON:0005068!1.64e-11!57;UBERON:0006241!1.64e-11!57;UBERON:0007135!1.64e-11!57;UBERON:0002616!1.82e-10!59;UBERON:0003080!7.13e-10!42;UBERON:0002780!1.24e-09!41;UBERON:0001890!1.24e-09!41;UBERON:0006240!1.24e-09!41;UBERON:0000955!6.91e-09!69;UBERON:0006238!6.91e-09!69;UBERON:0001017!9.72e-08!82;UBERON:0000073!1.20e-07!94;UBERON:0001016!1.20e-07!94;UBERON:0005743!1.35e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.79e-07;41!UBERON:0001890;1.79e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.67e-21,114;UBERON:0001049,2.86e-11,56;UBERON:0005068,2.86e-11,56;UBERON:0006241,2.86e-11,56;UBERON:0007135,2.86e-11,56;UBERON:0000073,2.33e-10,53;UBERON:0002616,2.33e-10,53;UBERON:0002780,1.24e-09,41;UBERON:0001890,1.24e-09,41;UBERON:0003080,1.24e-09,41;UBERON:0006240,1.24e-09,41;UBERON:0000955,1.15e-08,68;UBERON:0006238,1.15e-08,68;UBERON:0001016,1.43e-07,89;UBERON:0001017,1.55e-07,81 | |||
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| |||
|short_description=p1@BBX | |||
}} |
Revision as of 20:22, 21 January 2014
Short description: | p1@BBX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BBX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000325805, ENST00000402543, ENST00000474137, ENST00000485939_5end |
EntrezGene: | BBX |
HGNC: | 14422 |
UniProt: | Q8WY36C9JA69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.88e-08 | 52 |
lymphocyte | 6.58e-08 | 53 |
common lymphoid progenitor | 6.58e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.67e-21 | 114 |
neural tube | 2.86e-11 | 56 |
neural rod | 2.86e-11 | 56 |
future spinal cord | 2.86e-11 | 56 |
neural keel | 2.86e-11 | 56 |
regional part of nervous system | 2.33e-10 | 53 |
regional part of brain | 2.33e-10 | 53 |
regional part of forebrain | 1.24e-09 | 41 |
forebrain | 1.24e-09 | 41 |
anterior neural tube | 1.24e-09 | 41 |
future forebrain | 1.24e-09 | 41 |
brain | 1.15e-08 | 68 |
future brain | 1.15e-08 | 68 |
nervous system | 1.43e-07 | 89 |
central nervous system | 1.55e-07 | 81 |