FFCP PHASE1:Hg19::chr2:85555355..85555383,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15450 | |||
|TSSclassifier=strong | |||
|UniProt=F8W8W7,O43493 | |||
|association_with_transcript=0bp_to_ENST00000282120,ENST00000398263,uc002soz.2,uc002spa.2,uc002spb.2,uc002spc.1,uc010fgd.1_5end | |||
|description=CAGE_peak_4_at_TGOLN2_5end | |||
|id=chr2:85555355..85555383,- | |||
|ontology_enrichment_celltype=CL:0000738!4.06e-24!140;CL:0000766!5.01e-24!76;CL:0002057!2.76e-22!42;CL:0000037!6.31e-22!172;CL:0000566!6.31e-22!172;CL:0000557!3.25e-21!71;CL:0002032!1.78e-20!165;CL:0000837!1.78e-20!165;CL:0000860!5.74e-20!45;CL:0002031!6.21e-20!124;CL:0002087!2.58e-19!119;CL:0002009!6.07e-19!65;CL:0000763!1.05e-18!112;CL:0000049!1.05e-18!112;CL:0000839!1.54e-18!70;CL:0000988!2.02e-18!182;CL:0002194!3.75e-18!63;CL:0000576!3.75e-18!63;CL:0000040!3.75e-18!63;CL:0000559!3.75e-18!63;CL:0000134!1.18e-08!358;CL:0000048!3.25e-08!430;CL:0002320!2.52e-07!365;CL:0000723!4.07e-07!436;CL:0000034!4.24e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.11e-22;33!CL:0002057;4.11e-22;33!CL:0000576;9.25e-18;48!CL:0000473;1.86e-17;39!CL:0000234;1.86e-17;39!CL:0000766;1.65e-14;69!CL:0002087;1.90e-08;104!CL:0000738;7.02e-08;136!CL:0000763;1.24e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.07e-33,72;CL:0000738,1.12e-31,136;CL:0000557,2.09e-29,67;CL:0000860,6.13e-28,42;CL:0002057,6.13e-28,42;CL:0000037,1.92e-27,168;CL:0000473,4.47e-27,48;CL:0000234,4.47e-27,48;CL:0002009,1.85e-26,61;CL:0002031,4.31e-26,120;CL:0000839,5.37e-26,66;CL:0002194,1.99e-25,59;CL:0000576,1.99e-25,59;CL:0000040,1.99e-25,59;CL:0000559,1.99e-25,59;CL:0002087,2.74e-25,115;CL:0002032,2.99e-25,161;CL:0000837,2.99e-25,161;CL:0000988,8.05e-24,177;CL:0000763,9.98e-24,108;CL:0000049,9.98e-24,108;CL:0000134,4.60e-10,354;CL:0002320,4.95e-09,361;CL:0000048,1.42e-08,427;CL:0000034,6.29e-08,441;CL:0000723,8.19e-08,433;CL:0000094,6.50e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-20;42!CL:0000049;2.31e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-21!102;UBERON:0003061!1.16e-21!102;UBERON:0002193!1.38e-20!112;UBERON:0002405!1.98e-18!115;UBERON:0002371!3.52e-17!80;UBERON:0007023!1.08e-14!115;UBERON:0003081!1.13e-14!216;UBERON:0001474!1.66e-14!86;UBERON:0004765!4.90e-10!101;UBERON:0001434!4.90e-10!101;UBERON:0002204!9.81e-08!167;UBERON:0002384!7.91e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.31e-29,98;UBERON:0003061,2.31e-29,98;UBERON:0002193,8.81e-28,108;UBERON:0002371,6.26e-24,76;UBERON:0002405,1.81e-23,93;UBERON:0001474,4.46e-21,82;UBERON:0003081,1.47e-18,203;UBERON:0004765,5.89e-17,90;UBERON:0001434,4.05e-14,100;UBERON:0007023,2.31e-12,114;UBERON:0002204,1.95e-09,167;UBERON:0002384,8.61e-09,371;UBERON:0000926,3.54e-07,315;UBERON:0004120,3.54e-07,315;UBERON:0006603,3.54e-07,315 | |||
|phase1_expression=0.363356758541113,2.35510576280081,1.26858963686374,1.0007329835313,1.34088328328186,1.74467704820074,0,0.631719873426831,1.56711376919903,0.245733936501509,0.697801167972428,0.436882744260345,1.31883489114227,0.37129905888014,0,2.6893005858071,2.41077811209591,0.730310090387373,1.95173119516203,0.369363174230364,0.612002073732759,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,0.687720651731561,0.492603536699674,0.314843125254717,1.96682138424452,2.68680578668049,3.71558695958582,0,0.30120591877825,0.739508020333575,0.309868802321207,0,2.64240395401362,4.43196326825502,7.01905566145496,5.20826089718044,3.13481663935894,1.6194683300949,3.60605794687861,5.08893835728477,4.53451132426571,4.85168122375632,4.64858073811369,6.16751832032739,3.09706370895104,5.46615545412086,3.84241059793651,5.67557351732605,4.48169384957604,1.29096936716765,1.35426486594342,4.32957380947991,6.5497476013883,4.94391665779186,7.34601341690166,3.85114832491312,9.59005688698562,5.60747210317417,4.58766412529753,5.54092175692502,5.5139755339431,7.94339314567596,8.71951148593805,4.01997864410789,7.82224377630302,3.04064382587163,4.23779651843358,4.78760926783834,5.69632297393592,2.32380814943136,1.4882300997553,1.46761051855863,2.2465726229299,2.10247649978109,4.018139667427,3.13514018115373,2.18808344918999,2.00930569141097,0,1.09227722252426,0.889509253863555,1.70692089026603,2.00197993518006,4.02326707968138,1.98313461835459,1.90810750907073,5.12291672198504,5.87237189370939,4.96955196562797,2.64342657158052,10.0891541336676,1.84368859342554,1.96709770113833,2.35806457649499,2.87842098599313,1.17030546773475,2.60737813306872,1.89379122293893,3.89653456815823,1.33692548262208,1.17842362989935,2.43687284041983,1.08321545506006,0.768547918354051,0.650296737799391,0.986627427622057,0.829050053357545,2.02862160014537,0.889719378972363,0.535081656179426,1.04535523804977,1.0197840842781,1.91610246800961,2.06176467289578,1.77113784413652,1.91139248594458,1.30216690771284,2.85135613334512,0.752875595388864,1.66382594500744,0,2.13099526839615,0.821127996921047,3.62892137804518,2.40696176205157,2.89648807765598,4.87613732627923,0,0.511450247374121,1.80719576192283,0.50133791063589,0.724232594804119,2.3858578411533,1.94653948121054,0.850813354476611,0.443458794925128,0.175669571386252,1.76821751921912,0.364295288292542,0.741568885568859,1.62273696827342,1.21890816109487,1.59549552622638,1.43094374583205,1.14398982156026,1.85728750664782,0.79504962946682,0,1.73570250803797,2.26123176769604,1.67799774483962,0.825354125820202,2.29894463190492,0.258416759169329,0.71153252537342,1.00416183829401,0,0.760272105718513,0.976248230192678,1.10298924103761,0.81014194788176,0.357198913136319,0.898117490504679,0.788280363383256,1.53316637465883,0,0.732806975721629,6.58902087180316,15.511210565933,0.436094052142534,1.49091585508596,0.379891534993739,0.529636723252875,3.15520282823695,1.06400514659507,1.12135520028461,0,1.48000529050296,0.622422070799533,0.808264032418128,1.63461903113459,0.605429710579726,1.72852777344,0.234321431833797,0.624320153660641,1.71141546463335,0,0.23486899728753,0,0.842704840213491,0,0.245668634623536,0,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,1.35214253015937,1.02088964844019,1.61450672119976,1.06778694409284,0.211931901159562,1.20036438433761,0.309157587715317,1.03056216018252,0.930584281657949,0.843881661206331,0.68205903612839,1.00973509697646,1.38074847963449,0.80823028409406,3.55009592516614,1.30977727695932,0.508681776931463,0.193260853163297,0.272746120590835,0.860413786167011,0,0.530119073285941,0.232387885739037,0.10366105501537,0.504641701751257,0,0,0,0,1.39310378409594,0.721879481669586,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.71181185733329,0.404493924480493,0.196221465125346,0,0.738155454624648,1.40241773803446,0.8231480226628,0,5.07020139287323,1.96565443335525,2.36315962672562,0,0.737930631258681,0.514703430895577,0.329250856225877,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,2.88662684050547,0.811512834825538,1.40890433082986,2.02113026865503,0.925971025153221,1.33177906564219,0,0,1.96973604869918,1.8720341211139,2.52672975890838,0,0.335964256397719,0.141775097242386,0.447792613514241,0,0.766765358330422,1.47798971368783,2.46535615237033,2.90259361757081,1.58531948758658,4.16600030307054,0.507983154337352,1.90994212779139,0,1.71072446022705,0.514137463516618,0.600686115687835,0.285826432630578,0.560655421726804,0,0.5867062865676,1.29271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.714889968290738,1.08524321078289,0,0.65147236858747,0.710783897485092,0,1.50719688529793,0.871533458600294,1.29964888536674,0,1.50677127429638,0,0.239624855491583,0,1.42636905040718,1.59259437334337,0.61642896765115,1.07436577943937,0.336255431980582,6.10795356625974,4.52817907204986,6.93052395910641,0.254094624222463,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| |||
|short_description=p4@TGOLN2 | |||
}} |
Revision as of 04:11, 21 January 2014
Short description: | p4@TGOLN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGOLN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000282120, ENST00000398263, uc002soz.2, uc002spa.2, uc002spb.2, uc002spc.1, uc010fgd.1_5end |
EntrezGene: | TGOLN2 |
HGNC: | 15450 |
UniProt: | F8W8W7O43493 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.07e-33 | 72 |
leukocyte | 1.12e-31 | 136 |
granulocyte monocyte progenitor cell | 2.09e-29 | 67 |
classical monocyte | 6.13e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.13e-28 | 42 |
hematopoietic stem cell | 1.92e-27 | 168 |
defensive cell | 4.47e-27 | 48 |
phagocyte | 4.47e-27 | 48 |
macrophage dendritic cell progenitor | 1.85e-26 | 61 |
hematopoietic lineage restricted progenitor cell | 4.31e-26 | 120 |
myeloid lineage restricted progenitor cell | 5.37e-26 | 66 |
monopoietic cell | 1.99e-25 | 59 |
monocyte | 1.99e-25 | 59 |
monoblast | 1.99e-25 | 59 |
promonocyte | 1.99e-25 | 59 |
nongranular leukocyte | 2.74e-25 | 115 |
hematopoietic oligopotent progenitor cell | 2.99e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.99e-25 | 161 |
hematopoietic cell | 8.05e-24 | 177 |
myeloid cell | 9.98e-24 | 108 |
common myeloid progenitor | 9.98e-24 | 108 |
mesenchymal cell | 4.60e-10 | 354 |
connective tissue cell | 4.95e-09 | 361 |
multi fate stem cell | 1.42e-08 | 427 |
stem cell | 6.29e-08 | 441 |
somatic stem cell | 8.19e-08 | 433 |
granulocyte | 6.50e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.31e-29 | 98 |
blood island | 2.31e-29 | 98 |
hemolymphoid system | 8.81e-28 | 108 |
bone marrow | 6.26e-24 | 76 |
immune system | 1.81e-23 | 93 |
bone element | 4.46e-21 | 82 |
lateral plate mesoderm | 1.47e-18 | 203 |
skeletal element | 5.89e-17 | 90 |
skeletal system | 4.05e-14 | 100 |
adult organism | 2.31e-12 | 114 |
musculoskeletal system | 1.95e-09 | 167 |
connective tissue | 8.61e-09 | 371 |
mesoderm | 3.54e-07 | 315 |
mesoderm-derived structure | 3.54e-07 | 315 |
presumptive mesoderm | 3.54e-07 | 315 |