FFCP PHASE1:Hg19::chr2:74730612..74730621,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-230bp_to_BC101224,BC101225,BC101226,BC101227_5end | |||
|description=CAGE_peak_6_at_LOC151534_5end | |||
|id=chr2:74730612..74730621,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.97e-20!42;CL:0000860!5.73e-18!45;CL:0002194!2.01e-13!63;CL:0000576!2.01e-13!63;CL:0000040!2.01e-13!63;CL:0000559!2.01e-13!63;CL:0000839!5.63e-13!70;CL:0000557!1.37e-12!71;CL:0002009!1.38e-12!65;CL:0000766!7.77e-11!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.66e-61;33!CL:0002057;2.66e-61;33!CL:0000473;2.43e-42;39!CL:0000234;2.43e-42;39!CL:0000576;9.58e-28;48!CL:0000766;6.68e-14;69!CL:0002570;4.62e-10;8!CL:0000763;2.54e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.19e-50,42;CL:0002057,2.19e-50,42;CL:0000473,3.35e-43,48;CL:0000234,3.35e-43,48;CL:0002194,3.74e-33,59;CL:0000576,3.74e-33,59;CL:0000040,3.74e-33,59;CL:0000559,3.74e-33,59;CL:0002009,7.38e-32,61;CL:0000839,5.84e-29,66;CL:0000557,1.97e-28,67;CL:0000766,5.21e-26,72;CL:0000763,1.58e-16,108;CL:0000049,1.58e-16,108;CL:0002087,7.16e-14,115;CL:0002031,4.98e-13,120;CL:0000738,9.24e-11,136;CL:0002570,6.03e-10,8;CL:0002032,5.92e-09,161;CL:0000837,5.92e-09,161;CL:0000219,1.14e-08,386;CL:0000988,2.43e-08,177;CL:0000037,2.53e-08,168;CL:0002320,4.78e-08,361;CL:0000134,9.35e-08,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-36;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.42e-12!80;UBERON:0001474!3.26e-10!86;UBERON:0004765!2.88e-09!101;UBERON:0001434!2.88e-09!101;UBERON:0002405!1.33e-08!115;UBERON:0000926!4.51e-08!448;UBERON:0004120!4.51e-08!448;UBERON:0006603!4.51e-08!448;UBERON:0002390!2.46e-07!102;UBERON:0003061!2.46e-07!102;UBERON:0002193!7.50e-07!112;UBERON:0002384!7.63e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.89e-11;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.87e-26,76;UBERON:0001474,5.03e-24,82;UBERON:0004765,4.03e-23,90;UBERON:0002405,2.20e-20,93;UBERON:0001434,4.15e-20,100;UBERON:0002390,5.31e-19,98;UBERON:0003061,5.31e-19,98;UBERON:0002193,1.28e-16,108;UBERON:0002204,3.98e-12,167;UBERON:0001013,1.01e-10,14;UBERON:0003081,2.47e-10,203;UBERON:0002384,3.06e-08,371;UBERON:0000926,2.75e-07,315;UBERON:0004120,2.75e-07,315;UBERON:0006603,2.75e-07,315 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.422863212287913,0,0,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0,0.408001382488506,0,0,0.273748850145768,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0.447830948479849,0,0,1.45398238779565,2.26725566213286,2.91100873425379,2.78914844286822,5.75635043230556,3.40677007984614,1.1507695692886,1.7931249457037,2.12834006899727,2.75796544589295,3.87290810150296,1.35426486594342,4.1413314699373,2.18324920046277,1.34834090667051,2.44867113896722,1.92557416245656,1.91801137739712,0.659702600373432,0.797854630486527,2.55734850319616,2.03146467040009,1.70215567407342,1.24564449799115,3.26623264833766,2.08593167368081,2.17188844705117,0,1.47311054395026,0.949387162322653,0,0,0.209658645508376,0,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0.446498641420399,0.673588117878509,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0.560677600142307,0,0.24666754841716,0.933633106199299,0.538842688278752,0.490385709340376,0,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0.110293972732394,0.871517776369625,0.237270619111097,0,0.392442930250692,0,2.95262181849859,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0.977424915930974,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0,0,0,0,0,0,0.528290604079356,0.207328115540772,0,0.25248486685276,0.698476837213859,1.52795370223311,3.51652341630141,0,0.616964956219941,1.20137223137567,1.14330573052231,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0.542621605391443,0,1.30294473717494,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0.24538298343828,1.50051156317903,0.542530047399471,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0.511707249066704,0,0,0.462629081407967,0.532685175939381,0.821271560138091,0,1.27831416305955,0.362578348774867,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,1.13733384070897,0.850468526382578,0,1.54227252690289,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0,0.537101224341368,0.290033387828457,0.340906509664404,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,1.43897966066652,0.54907405947211,0,0.202182481573316,0,0,1.46290121726877,0,0,0.136499911407986,0.848432591722276,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05836791361941,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0.317873157960757,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,0,0,0,0.208843899010911,0,0,0,0,0,2.18502341580683,0,0,0,0,2.70582154946087,0.103688191397247,0,0.330991955875499,0.627865836814451,1.19472429772959,0.284609546029793,0.693373365065693,0,0,0.0870592065804026,0.17472666824203,0.687944129886466,0,0,0,0,0,0,0,0.596143835108969,0,0.195551382734803,0.320635281006135,0.213452994739353,0.19980960958213,0.288180834308212,0.343609788497747,0,0,0.745515213392595,0.235694034616795,0,0,0,0.866851769704557,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0,0,0,3.06698439213759,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,1.97143852804142,0.856396000634902,0,0,0,0.74627401443437,1.8697064787778,1.10961172300523,0.757612021100357,0.754703705257725,1.77962244319307,1.60188047877847,1.20984739010591,0.466311601748341,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0.400027764663154,1.71697852591396,1.01024846629776,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0.168942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| |||
|short_description=p6@LOC151534 | |||
}} |
Revision as of 04:01, 21 January 2014
Short description: | p6@LOC151534 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LOC151534_5end |
Coexpression cluster: | NA |
Association with transcript: | -230bp_to_BC101224, BC101225, BC101226, BC101227_5end |
EntrezGene: | LOC151534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.19e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-50 | 42 |
defensive cell | 3.35e-43 | 48 |
phagocyte | 3.35e-43 | 48 |
monopoietic cell | 3.74e-33 | 59 |
monocyte | 3.74e-33 | 59 |
monoblast | 3.74e-33 | 59 |
promonocyte | 3.74e-33 | 59 |
macrophage dendritic cell progenitor | 7.38e-32 | 61 |
myeloid lineage restricted progenitor cell | 5.84e-29 | 66 |
granulocyte monocyte progenitor cell | 1.97e-28 | 67 |
myeloid leukocyte | 5.21e-26 | 72 |
myeloid cell | 1.58e-16 | 108 |
common myeloid progenitor | 1.58e-16 | 108 |
nongranular leukocyte | 7.16e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 4.98e-13 | 120 |
leukocyte | 9.24e-11 | 136 |
mesenchymal stem cell of adipose | 6.03e-10 | 8 |
hematopoietic oligopotent progenitor cell | 5.92e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.92e-09 | 161 |
motile cell | 1.14e-08 | 386 |
hematopoietic cell | 2.43e-08 | 177 |
hematopoietic stem cell | 2.53e-08 | 168 |
connective tissue cell | 4.78e-08 | 361 |
mesenchymal cell | 9.35e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.87e-26 | 76 |
bone element | 5.03e-24 | 82 |
skeletal element | 4.03e-23 | 90 |
immune system | 2.20e-20 | 93 |
skeletal system | 4.15e-20 | 100 |
hematopoietic system | 5.31e-19 | 98 |
blood island | 5.31e-19 | 98 |
hemolymphoid system | 1.28e-16 | 108 |
musculoskeletal system | 3.98e-12 | 167 |
adipose tissue | 1.01e-10 | 14 |
lateral plate mesoderm | 2.47e-10 | 203 |
connective tissue | 3.06e-08 | 371 |
mesoderm | 2.75e-07 | 315 |
mesoderm-derived structure | 2.75e-07 | 315 |
presumptive mesoderm | 2.75e-07 | 315 |