FFCP PHASE1:Hg19::chr2:69180112..69180125,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=200504 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24588 | |||
|TSSclassifier=strong | |||
|UniProt=Q86XP6 | |||
|association_with_transcript=-10bp_to_ENST00000328895,NM_182536,uc002sfa.2,uc002sfb.3_5end | |||
|coexpression_cluster_id=C530 | |||
|description=CAGE_peak_3_at_GKN2_5end | |||
|id=chr2:69180112..69180125,- | |||
|ontology_enrichment_celltype=CL:0002150!5.14e-31!3;CL:0000861!5.14e-31!3;CL:0002379!7.76e-12!1;CL:0000235!9.46e-10!10 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.35e-08;5 | |||
|ontology_enrichment_disease=DOID:3112!2.63e-12!1;DOID:3620!7.76e-12!1;DOID:3565!7.76e-12!1;DOID:305!8.62e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.84e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.84e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002171!3.27e-12!1;UBERON:0006518!3.27e-12!1;UBERON:0008949!3.27e-12!1;UBERON:0000101!3.27e-12!1;UBERON:0002167!3.27e-12!1;UBERON:0008947!1.20e-09!38;UBERON:0003258!1.20e-09!38;UBERON:0002048!5.55e-08!22;UBERON:0000117!5.55e-08!22;UBERON:0000171!5.55e-08!22;UBERON:0000170!5.55e-08!22;UBERON:0005597!5.55e-08!22;UBERON:0000118!5.55e-08!22;UBERON:0005153!4.22e-07!37;UBERON:0000065!8.55e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.61e-34;1!UBERON:0006518;3.61e-34;1!UBERON:0008949;3.61e-34;1!UBERON:0000101;3.61e-34;1!UBERON:0002167;3.61e-34;1!UBERON:0002046;5.35e-08;5!UBERON:0000945;7.01e-08;5!UBERON:0010039;7.01e-08;5!UBERON:0002048;5.09e-07;22!UBERON:0000117;5.09e-07;22!UBERON:0000171;5.09e-07;22!UBERON:0000170;5.09e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.61e-34,1;UBERON:0006518,3.61e-34,1;UBERON:0008949,3.61e-34,1;UBERON:0000101,3.61e-34,1;UBERON:0002167,3.61e-34,1;UBERON:0002046,5.35e-08,5;UBERON:0004117,5.35e-08,5;UBERON:0007689,5.35e-08,5;UBERON:0007123,5.35e-08,5;UBERON:0003091,5.35e-08,5;UBERON:0002048,5.09e-07,22;UBERON:0000117,5.09e-07,22;UBERON:0000171,5.09e-07,22;UBERON:0000170,5.09e-07,22;UBERON:0005597,5.09e-07,22;UBERON:0000118,5.09e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7366629343419,0.157204305099666,9.94173732833269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2729807813732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@GKN2 | |||
}} |
Revision as of 03:40, 21 January 2014
Short description: | p3@GKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_3_at_GKN2_5end |
Coexpression cluster: | C530_papillary_salivary_skin_Smooth_leiomyoma_lung_Keratinocyte |
Association with transcript: | -10bp_to_ENST00000328895, NM_182536, uc002sfa.2, uc002sfb.3_5end |
EntrezGene: | GKN2 |
HGNC: | 24588 |
UniProt: | Q86XP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.61e-34 | 1 |
right lung lobe | 3.61e-34 | 1 |
lower lobe of lung | 3.61e-34 | 1 |
lobe of lung | 3.61e-34 | 1 |
right lung | 3.61e-34 | 1 |
thyroid gland | 5.35e-08 | 5 |
pharyngeal pouch | 5.35e-08 | 5 |
thyroid diverticulum | 5.35e-08 | 5 |
pharyngeal pouch 2 | 5.35e-08 | 5 |
thyroid primordium | 5.35e-08 | 5 |
lung | 5.09e-07 | 22 |
respiratory tube | 5.09e-07 | 22 |
respiration organ | 5.09e-07 | 22 |
pair of lungs | 5.09e-07 | 22 |
lung primordium | 5.09e-07 | 22 |
lung bud | 5.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.84e-34 | 1 |