FFCP PHASE1:Hg19::chr2:48667898..48667981,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=129285 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30595 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZMI0,F8WE40,E1B6W7 | |||
|association_with_transcript=0bp_to_ENST00000281394,ENST00000294952,ENST00000416913,NM_001135629,NM_001193475,NM_152994,NR_024188,uc002rwi.1,uc002rwj.2,uc002rwk.2,uc002rwl.2,uc002rwm.2,uc010yok.1_5end | |||
|coexpression_cluster_id=C257 | |||
|description=CAGE_peak_1_at_PPP1R21_5end | |||
|id=chr2:48667898..48667981,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.49e-30!115;UBERON:0001049!7.87e-23!57;UBERON:0005068!7.87e-23!57;UBERON:0006241!7.87e-23!57;UBERON:0007135!7.87e-23!57;UBERON:0003080!1.50e-20!42;UBERON:0002780!2.36e-20!41;UBERON:0001890!2.36e-20!41;UBERON:0006240!2.36e-20!41;UBERON:0000955!1.68e-19!69;UBERON:0006238!1.68e-19!69;UBERON:0002616!3.54e-19!59;UBERON:0001017!5.78e-18!82;UBERON:0005743!4.01e-17!86;UBERON:0001893!5.97e-17!34;UBERON:0002020!7.74e-17!34;UBERON:0003528!7.74e-17!34;UBERON:0002791!2.43e-16!33;UBERON:0001869!1.02e-15!32;UBERON:0000073!2.08e-15!94;UBERON:0001016!2.08e-15!94;UBERON:0003075!9.73e-15!86;UBERON:0007284!9.73e-15!86;UBERON:0002346!1.30e-14!90;UBERON:0002619!9.08e-14!22;UBERON:0000956!6.19e-13!25;UBERON:0000203!6.19e-13!25;UBERON:0001950!1.15e-12!20;UBERON:0003056!1.82e-11!61;UBERON:0000153!3.19e-09!129;UBERON:0007811!3.19e-09!129;UBERON:0000033!3.60e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.69e-15;41!UBERON:0001890;5.69e-15;41!UBERON:0001893;1.13e-14;34!UBERON:0003528;1.39e-14;34!UBERON:0002020;1.39e-14;34!UBERON:0002791;1.88e-14;32!UBERON:0001869;2.09e-14;32!UBERON:0002619;7.18e-14;22!UBERON:0000956;2.91e-13;25!UBERON:0000203;2.91e-13;25!UBERON:0000073;3.25e-13;53!UBERON:0002616;3.25e-13;53!UBERON:0001950;8.87e-13;20!UBERON:0000955;4.30e-09;68!UBERON:0007023;1.03e-08;114!UBERON:0001017;1.44e-08;75!UBERON:0001016;1.57e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.61e-29,114;UBERON:0001049,1.32e-22,56;UBERON:0005068,1.32e-22,56;UBERON:0006241,1.32e-22,56;UBERON:0007135,1.32e-22,56;UBERON:0000073,3.80e-21,53;UBERON:0002616,3.80e-21,53;UBERON:0002780,2.36e-20,41;UBERON:0001890,2.36e-20,41;UBERON:0003080,2.36e-20,41;UBERON:0006240,2.36e-20,41;UBERON:0000955,2.92e-19,68;UBERON:0006238,2.92e-19,68;UBERON:0001017,1.01e-17,81;UBERON:0001893,5.97e-17,34;UBERON:0003528,7.74e-17,34;UBERON:0002020,7.74e-17,34;UBERON:0001016,7.41e-16,89;UBERON:0002791,9.40e-16,32;UBERON:0001869,1.02e-15,32;UBERON:0003075,1.47e-14,82;UBERON:0007284,1.47e-14,82;UBERON:0002346,2.03e-14,86;UBERON:0002619,9.08e-14,22;UBERON:0000956,6.19e-13,25;UBERON:0000203,6.19e-13,25;UBERON:0001950,1.15e-12,20;UBERON:0003056,1.12e-11,61;UBERON:0010371,1.59e-08,104;UBERON:0010314,2.71e-08,132 | |||
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| |||
|short_description=p1@PPP1R21 | |||
}} |
Revision as of 03:03, 21 January 2014
Short description: | p1@PPP1R21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP1R21_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | 0bp_to_ENST00000281394, ENST00000294952, ENST00000416913, NM_001135629, NM_001193475, NM_152994, NR_024188, uc002rwi.1, uc002rwj.2, uc002rwk.2, uc002rwl.2, uc002rwm.2, uc010yok.1_5end |
EntrezGene: | PPP1R21 |
HGNC: | 30595 |
UniProt: | Q6ZMI0F8WE40E1B6W7 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.61e-29 | 114 |
neural tube | 1.32e-22 | 56 |
neural rod | 1.32e-22 | 56 |
future spinal cord | 1.32e-22 | 56 |
neural keel | 1.32e-22 | 56 |
regional part of nervous system | 3.80e-21 | 53 |
regional part of brain | 3.80e-21 | 53 |
regional part of forebrain | 2.36e-20 | 41 |
forebrain | 2.36e-20 | 41 |
anterior neural tube | 2.36e-20 | 41 |
future forebrain | 2.36e-20 | 41 |
brain | 2.92e-19 | 68 |
future brain | 2.92e-19 | 68 |
central nervous system | 1.01e-17 | 81 |
telencephalon | 5.97e-17 | 34 |
brain grey matter | 7.74e-17 | 34 |
gray matter | 7.74e-17 | 34 |
nervous system | 7.41e-16 | 89 |
regional part of telencephalon | 9.40e-16 | 32 |
cerebral hemisphere | 1.02e-15 | 32 |
neural plate | 1.47e-14 | 82 |
presumptive neural plate | 1.47e-14 | 82 |
neurectoderm | 2.03e-14 | 86 |
regional part of cerebral cortex | 9.08e-14 | 22 |
cerebral cortex | 6.19e-13 | 25 |
pallium | 6.19e-13 | 25 |
neocortex | 1.15e-12 | 20 |
pre-chordal neural plate | 1.12e-11 | 61 |
ecto-epithelium | 1.59e-08 | 104 |
structure with developmental contribution from neural crest | 2.71e-08 | 132 |