FFCP PHASE1:Mm9::chr11:116390876..116390880,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:116390876..116390880,-|id=chr11:116390876..116390880,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,1.33e-11,6;CL:0000187,1.33e-11,6;CL:0000056,1.33e-11,6;CL:0000192,1.14e-10,3;CL:0000359,1.14e-10,3;CL:0002539,1.14e-10,3;CL:0000514,1.14e-10,3;CL:0002027,1.42e-10,3;CL:0002006,1.42e-10,3;CL:0002024,1.42e-10,3;CL:0000222,4.99e-10,7;CL:0000355,6.38e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!1.45e-08!98;UBERON:0000466!4.64e-08!79;UBERON:0000464!4.20e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.14e-10,3;UBERON:0004237,1.14e-10,3;UBERON:0004695,1.14e-10,3;UBERON:0002111,1.14e-10,3;UBERON:0004178,1.14e-10,3;UBERON:0000947,3.16e-08,4;UBERON:0001637,3.16e-08,4;UBERON:0004573,3.16e-08,4;UBERON:0003509,3.16e-08,4;UBERON:0004571,3.16e-08,4;UBERON:0010191,3.16e-08,4;UBERON:0004572,3.16e-08,4;UBERON:0004872,6.22e-08,33;UBERON:0001134,6.38e-08,9;UBERON:0002036,6.38e-08,9;UBERON:0002385,6.38e-08,9;UBERON:0000486,6.38e-08,9;UBERON:0007503,6.38e-08,9;UBERON:0001015,6.38e-08,9;UBERON:0002329,6.38e-08,9;UBERON:0003082,6.38e-08,9;UBERON:0003059,6.38e-08,9;UBERON:0007282,6.38e-08,9;UBERON:0004290,6.38e-08,9;UBERON:0009618,6.38e-08,9;UBERON:0000383,3.51e-07,10;UBERON:0000055,9.46e-07,5;UBERON:0007500,9.46e-07,5;UBERON:0001981,9.46e-07,5;UBERON:0002049,9.46e-07,5;UBERON:0007798,9.46e-07,5;UBERON:0004537,9.46e-07,5;UBERON:0006965,9.46e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.666219523631325,1.41732687172878,1.39912375625629,0,0,0.42438965179803,0.255129870453209,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.01376931219515,2.38610777810186,0,0,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0,0,0,0,0,0.186399445825301,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0,0,0,0.346970653532272,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0.203678727700633,0.373220911830279,0.758168275301024,1.68353484709179,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.384341160854549,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,0,0.333690211432188,0.393117990226406,1.12431056192427,0.811440485554012,0.482354319504834,0.25462585178142,0.863088412352432,1.45921704097532,0.549122826376163,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0.469380496577004,0,0,0.585400943573396,0.788175720530955,1.10732344824387,0.318909537314974,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0.728341908464944,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,1.64270195644597,0.21183207086382,0,0.32977250588296,0.807322133479528,0.482503399425247,0.596861720015682,0.492422699235184,0.291480836629851,0.18542530201051,0.170870880797853,0,0.370389054739423,5.27431679613135,3.14396723758358,0.915112692826091,0.169978429993855,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.495920734352016,0,0,0,0,0.448549638131936,0,0,0.387479470433193,0.168956125490778,0.469428954583016,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0.19318959403219,0.750729901804728,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.376437521661322,0.169229215783353,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0.578719832943424,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0|short_description=p@chr11:116390876..116390880,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:116390876..116390880,- | |||
|description=CAGE_peak_at_chr11:116390876..116390880,- | |||
|id=chr11:116390876..116390880,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.33e-11,6;CL:0000187,1.33e-11,6;CL:0000056,1.33e-11,6;CL:0000192,1.14e-10,3;CL:0000359,1.14e-10,3;CL:0002539,1.14e-10,3;CL:0000514,1.14e-10,3;CL:0002027,1.42e-10,3;CL:0002006,1.42e-10,3;CL:0002024,1.42e-10,3;CL:0000222,4.99e-10,7;CL:0000355,6.38e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.45e-08!98;UBERON:0000466!4.64e-08!79;UBERON:0000464!4.20e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.14e-10,3;UBERON:0004237,1.14e-10,3;UBERON:0004695,1.14e-10,3;UBERON:0002111,1.14e-10,3;UBERON:0004178,1.14e-10,3;UBERON:0000947,3.16e-08,4;UBERON:0001637,3.16e-08,4;UBERON:0004573,3.16e-08,4;UBERON:0003509,3.16e-08,4;UBERON:0004571,3.16e-08,4;UBERON:0010191,3.16e-08,4;UBERON:0004572,3.16e-08,4;UBERON:0004872,6.22e-08,33;UBERON:0001134,6.38e-08,9;UBERON:0002036,6.38e-08,9;UBERON:0002385,6.38e-08,9;UBERON:0000486,6.38e-08,9;UBERON:0007503,6.38e-08,9;UBERON:0001015,6.38e-08,9;UBERON:0002329,6.38e-08,9;UBERON:0003082,6.38e-08,9;UBERON:0003059,6.38e-08,9;UBERON:0007282,6.38e-08,9;UBERON:0004290,6.38e-08,9;UBERON:0009618,6.38e-08,9;UBERON:0000383,3.51e-07,10;UBERON:0000055,9.46e-07,5;UBERON:0007500,9.46e-07,5;UBERON:0001981,9.46e-07,5;UBERON:0002049,9.46e-07,5;UBERON:0007798,9.46e-07,5;UBERON:0004537,9.46e-07,5;UBERON:0006965,9.46e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.666219523631325,1.41732687172878,1.39912375625629,0,0,0.42438965179803,0.255129870453209,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.01376931219515,2.38610777810186,0,0,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0,0,0,0,0,0.186399445825301,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0,0,0,0.346970653532272,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0.203678727700633,0.373220911830279,0.758168275301024,1.68353484709179,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.384341160854549,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,0,0.333690211432188,0.393117990226406,1.12431056192427,0.811440485554012,0.482354319504834,0.25462585178142,0.863088412352432,1.45921704097532,0.549122826376163,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0.469380496577004,0,0,0.585400943573396,0.788175720530955,1.10732344824387,0.318909537314974,0,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0.728341908464944,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,1.64270195644597,0.21183207086382,0,0.32977250588296,0.807322133479528,0.482503399425247,0.596861720015682,0.492422699235184,0.291480836629851,0.18542530201051,0.170870880797853,0,0.370389054739423,5.27431679613135,3.14396723758358,0.915112692826091,0.169978429993855,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.495920734352016,0,0,0,0,0.448549638131936,0,0,0.387479470433193,0.168956125490778,0.469428954583016,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0.19318959403219,0.750729901804728,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.376437521661322,0.169229215783353,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0.578719832943424,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p@chr11:116390876..116390880,- | |||
}} |
Latest revision as of 12:07, 5 August 2015
Short description: | p@chr11:116390876..116390880, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:116390876..116390880, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.33e-11 | 6 |
muscle cell | 1.33e-11 | 6 |
myoblast | 1.33e-11 | 6 |
smooth muscle cell | 1.14e-10 | 3 |
vascular associated smooth muscle cell | 1.14e-10 | 3 |
aortic smooth muscle cell | 1.14e-10 | 3 |
smooth muscle myoblast | 1.14e-10 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 1.42e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.42e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.42e-10 | 3 |
mesodermal cell | 4.99e-10 | 7 |
multi-potent skeletal muscle stem cell | 6.38e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.14e-10 | 3 |
blood vessel smooth muscle | 1.14e-10 | 3 |
arterial system smooth muscle | 1.14e-10 | 3 |
artery smooth muscle tissue | 1.14e-10 | 3 |
aorta smooth muscle tissue | 1.14e-10 | 3 |
aorta | 3.16e-08 | 4 |
artery | 3.16e-08 | 4 |
systemic artery | 3.16e-08 | 4 |
arterial blood vessel | 3.16e-08 | 4 |
systemic arterial system | 3.16e-08 | 4 |
aortic system | 3.16e-08 | 4 |
arterial system | 3.16e-08 | 4 |
splanchnic layer of lateral plate mesoderm | 6.22e-08 | 33 |
skeletal muscle tissue | 6.38e-08 | 9 |
striated muscle tissue | 6.38e-08 | 9 |
muscle tissue | 6.38e-08 | 9 |
multilaminar epithelium | 6.38e-08 | 9 |
epithelial vesicle | 6.38e-08 | 9 |
musculature | 6.38e-08 | 9 |
somite | 6.38e-08 | 9 |
myotome | 6.38e-08 | 9 |
presomitic mesoderm | 6.38e-08 | 9 |
presumptive segmental plate | 6.38e-08 | 9 |
dermomyotome | 6.38e-08 | 9 |
trunk paraxial mesoderm | 6.38e-08 | 9 |
musculature of body | 3.51e-07 | 10 |
vessel | 9.46e-07 | 5 |
epithelial tube open at both ends | 9.46e-07 | 5 |
blood vessel | 9.46e-07 | 5 |
vasculature | 9.46e-07 | 5 |
vascular system | 9.46e-07 | 5 |
blood vasculature | 9.46e-07 | 5 |
vascular cord | 9.46e-07 | 5 |