FFCP PHASE1:Hg19::chr2:44589036..44589149,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26276 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z624,B5MC16,B5MC79,C9JG28 | |||
|association_with_transcript=0bp_to_ENST00000378494,ENST00000402247,ENST00000403853,ENST00000407131,ENST00000454848,NM_024766,uc002rul.2,uc002rum.2_5end | |||
|description=CAGE_peak_1_at_CAMKMT_5end | |||
|id=chr2:44589036..44589149,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.94e-18!53;CL:0000051!1.94e-18!53;CL:0000838!4.00e-18!52;CL:0000791!1.61e-11!18;CL:0000789!1.61e-11!18;CL:0002420!1.61e-11!18;CL:0002419!1.61e-11!18;CL:0000790!1.61e-11!18;CL:0000084!5.66e-10!25;CL:0000827!5.66e-10!25;CL:0000945!4.89e-08!24;CL:0000826!4.89e-08!24;CL:0000625!8.58e-08!11;CL:0000988!9.64e-07!182;CL:0000236!9.81e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.21e-11;18!CL:0000789;1.21e-11;18!CL:0002419;1.21e-11;18!CL:0000542;2.37e-11;53!CL:0000084;3.50e-10;25!CL:0000945;5.45e-08;24!CL:0000625;7.23e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.94e-18,53;CL:0000051,1.94e-18,53;CL:0000838,4.00e-18,52;CL:0000791,1.61e-11,18;CL:0000789,1.61e-11,18;CL:0002420,1.61e-11,18;CL:0002419,1.61e-11,18;CL:0000790,1.61e-11,18;CL:0000084,5.66e-10,25;CL:0000827,5.66e-10,25;CL:0000945,4.89e-08,24;CL:0000826,4.89e-08,24;CL:0000625,8.58e-08,11;CL:0000236,9.81e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-11;18!CL:0000051;2.37e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.82e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.71e-07,114 | |||
|phase1_expression=7.08545679155171,5.1384125733836,5.92008497203079,6.00439790118782,4.46961094427288,3.48935409640147,2.53299878168311,2.52687949370732,7.05201196139564,2.94880723801811,7.6758128476967,6.11635841964482,3.69273769519835,6.43585035392242,4.97096063591874,1.34465029290355,4.21886169616784,6.57279081348636,4.39139518911456,5.90981078768582,4.48801520737357,6.89600387251793,4.29353980696585,5.61185142798825,7.90918629447258,14.2128934691189,9.35946719729382,10.7046662586604,7.47392126012918,13.0501995353052,6.50227717927519,4.59710612239464,6.92773613189975,4.06729411183466,9.76086727311801,25.4482926152485,7.04641054403633,10.5259127621057,8.42286679374595,11.0675544065084,8.50878802111712,9.71680998056939,7.7272670290256,3.92575244704825,4.53451132426571,2.18325655069035,3.71886459049095,3.70051099219643,3.71647645074124,2.58923153089935,1.5369642391746,3.78371567821736,5.86067657252252,4.51839278508678,6.77132432971709,2.63539275359647,3.27487380069415,2.24723484445085,4.59125838556354,5.1348644332175,3.19668562899521,2.30895910130701,2.99195486432448,2.55734850319616,3.48251086354301,1.70215567407342,3.73693349397345,4.01997864410789,3.12889751052121,3.69221035998698,4.84319602106695,3.31449872388808,5.06339819905415,10.3515090292851,10.2050063983221,11.3215668574523,9.0986191228661,10.2120287132224,14.4653028027372,13.3955989558387,9.15016715115815,11.6905058409366,24.6394742245852,16.3841583378639,15.1216573156804,14.9355577898278,18.0178194166206,18.3920780785435,15.8650769468367,13.3567525634951,11.9534723512984,10.5702694086769,10.3213771593812,9.25199300053181,7.8471198817415,8.16490662802739,21.6380747125216,13.3623659334716,12.130488440971,30.4279421611034,29.6589262636567,29.8272117612882,23.3792074089494,15.8202848776946,23.568472597987,21.2672538800276,26.5387786489715,16.9080542037891,18.7285460486225,17.759293697197,17.1337011027226,18.2575944013083,26.2467216796847,30.767195230317,27.179236189294,17.4496387754252,27.2086550457364,21.9921565108883,18.2174178254042,20.7067519310663,22.1368374311182,27.5631092890028,23.188568337977,23.0375900077953,21.2382235138988,20.3628436757855,18.8859439291841,19.3542473495743,12.0348088102578,19.8409433319435,2.43806866313962,4.02420515822182,5.37022759742827,3.97583067623023,2.50668955317945,4.05570253090306,7.95285947051099,4.86634870302636,8.60266836193017,7.76052891118974,8.16863506946072,7.26933869012305,5.82872461268068,11.4943177263173,12.0082535652233,10.2736545006568,6.1160661838678,10.493587469435,13.1558829479429,15.2297575545122,2.78267370313387,6.02164216574287,5.55424802572151,3.95715559346807,6.71199097935849,4.12677062910101,3.76190939766259,7.75250277507987,6.75955899104749,7.69857409358742,3.62546385398232,3.80136052859256,2.68468263302986,4.04429388380456,3.24056779152704,8.48347418698758,7.4094692966636,6.53146586803269,1.53316637465883,2.84779697870439,5.67925406184263,10.5424333948851,7.75560528296651,11.3384453557059,2.98183171017191,5.57174251324151,18.9345128562903,10.6129549677061,5.32002573297536,4.48542080113846,2.1349799145941,2.71334303258876,8.40269795579369,4.84958419450877,7.84617134944602,8.02194366518136,1.72852777344,6.7953215231801,9.36480230490961,7.41613368007784,5.52960118041664,5.87172493218824,9.2267578289835,6.03938468819669,12.6575586178034,7.61572767332961,9.40264608699466,8.31602000097437,5.68713937340681,11.8320977051943,7.18618141816238,9.09015015351958,7.38199267244589,8.31192346452549,7.02364193409341,8.88814607817157,7.51190294532984,3.06266894532057,5.74046834204358,4.48470516518992,2.96704661623387,6.90209520994125,5.35873152039882,7.9868567414145,7.07244054060041,7.25738228637445,4.18979122193154,10.6022185182528,4.60249493211497,10.5069936932228,4.61512470271599,5.94437379543078,4.0694542154517,7.15065156704198,10.9098448236334,8.31733326628111,17.5642136826617,20.4095843215087,13.9432731443422,12.3356655468291,10.0928340350251,20.0737547491706,6.25798129319264,7.07565032012174,4.14404764057442,2.78620756819187,9.38443326170461,6.15195360207188,5.90046415273356,7.95336398615491,6.50734439121124,7.1900216550494,10.6771778599993,7.41572194880904,9.02618739576592,9.23393176671337,5.16708818237254,0,6.173610169971,7.3504355692771,12.6755034821831,3.9313088667105,13.5881678536723,14.5682822806835,13.8976935553718,3.94605963686609,7.13376855156066,2.24803506515239,7.53967293087231,6.38860271593854,6.51616610620649,7.27954349695705,4.3299402607582,7.41954591840492,6.10525210026273,2.88732895522148,2.77791307545966,3.23432058798817,8.69224837755203,4.29243081047436,8.37137820697151,6.55211942389866,5.7966153292604,14.9974134378843,4.03157107677263,10.2078070014518,6.35865511190223,7.55648240136301,3.83382679165211,1.47798971368783,5.28290604079356,4.56121854189699,7.49423757768199,5.0496973370552,8.12773046939764,4.20187268114105,5.86087236050235,5.13217338068116,7.50640696734262,9.01029173531752,8.28896654628677,6.16720963899484,5.66748089483264,2.12681028880755,6.85140093516222,7.15312891703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| |||
|short_description=p1@CAMKMT | |||
}} |
Revision as of 02:53, 21 January 2014
Short description: | p1@CAMKMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAMKMT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378494, ENST00000402247, ENST00000403853, ENST00000407131, ENST00000454848, NM_024766, uc002rul.2, uc002rum.2_5end |
EntrezGene: | CAMKMT |
HGNC: | 26276 |
UniProt: | Q7Z624B5MC16B5MC79C9JG28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.94e-18 | 53 |
common lymphoid progenitor | 1.94e-18 | 53 |
lymphoid lineage restricted progenitor cell | 4.00e-18 | 52 |
mature alpha-beta T cell | 1.61e-11 | 18 |
alpha-beta T cell | 1.61e-11 | 18 |
immature T cell | 1.61e-11 | 18 |
mature T cell | 1.61e-11 | 18 |
immature alpha-beta T cell | 1.61e-11 | 18 |
T cell | 5.66e-10 | 25 |
pro-T cell | 5.66e-10 | 25 |
lymphocyte of B lineage | 4.89e-08 | 24 |
pro-B cell | 4.89e-08 | 24 |
CD8-positive, alpha-beta T cell | 8.58e-08 | 11 |
B cell | 9.81e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.71e-07 | 114 |