FFCP PHASE1:Mm9::chr11:109583528..109583603,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=208659|HGNC=|MCL_coexpression_id=157|UniProt=Q8CID3,A2AGP7|association_with_transcript=0bp_to_ENSMUST00000020938,ENSMUST00000155559,NM_153782,uc007mcv.1,uc007mcw.1_5end|description=CAGE_peak_1_at_Fam20a_5end|id=chr11:109583528..109583603,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!3.85e-14!25;UBERON:0002330!3.85e-14!25;UBERON:0009854!1.70e-12!23;UBERON:0009856!1.70e-12!23;UBERON:0002107!2.57e-12!22;UBERON:0007499!2.57e-12!22;UBERON:0006925!2.57e-12!22;UBERON:0009497!2.57e-12!22;UBERON:0000015!2.57e-12!22;UBERON:0002423!2.57e-12!22;UBERON:0006235!2.57e-12!22;UBERON:0008835!2.57e-12!22;UBERON:0003894!2.57e-12!22;UBERON:0004161!2.57e-12!22;UBERON:0008836!2.57e-12!22;UBERON:0004111!1.65e-09!122;UBERON:0000025!2.41e-08!114;UBERON:0005256!9.29e-08!47;UBERON:0003914!5.84e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.59e-15,25;UBERON:0002330,8.59e-15,25;UBERON:0009854,4.60e-13,23;UBERON:0009856,4.60e-13,23;UBERON:0002107,7.11e-13,22;UBERON:0007499,7.11e-13,22;UBERON:0006925,7.11e-13,22;UBERON:0009497,7.11e-13,22;UBERON:0000015,7.11e-13,22;UBERON:0002423,7.11e-13,22;UBERON:0006235,7.11e-13,22;UBERON:0008835,7.11e-13,22;UBERON:0003894,7.11e-13,22;UBERON:0004161,7.11e-13,22;UBERON:0008836,7.11e-13,22;UBERON:0004111,5.32e-08,122;UBERON:0005256,2.45e-07,45;UBERON:0000025,4.93e-07,114|phase1_expression=4.80446541314382,0.348975407639361,0.909998478779072,0,0,1.00727563147134,1.40167584357315,0,0,0,0,0,0.171200729931206,0,0.666219523631325,0,0,0,0,0,2.89147186513637,0.595745707205312,0,2.07990149631429,1.14704640533585,1.72269589234506,0.430761996159075,1.07735616342945,0.190023419456374,1.00812051903972,0,0,0,0,6.06588401477677,3.98963148860382,6.12508068787107,0,0,0,0,0,0,3.27331726736501,2.83855407414641,0.550640256485045,3.12956537739216,0.218025156380447,0.659058548203415,0.194429899074283,3.63964696225943,0,0,2.17608642603403,0,18.2654199585522,11.4613375975503,10.8291139378263,0.202316460859598,0,0,3.72728985276045,4.4464739805557,6.74924787961049,13.8441290759376,10.6572017241915,8.08920298399693,6.53171119046643,0.207379224616955,0,0.420649922702764,9.42648248532552,8.1721360152097,0.122490799214954,0.575072826109418,0.919218786610021,5.50579404996943,3.06449611404451,3.68655679814984,0.659431438650969,0.365950574409639,1.04182674111352,3.90856198601933,6.19038871034848,5.19514042441154,10.0173719061047,5.83723891276322,2.42319279572891,0.075726193333184,0.453429360640713,19.7107852317141,19.7897491705719,15.6393406752783,51.8115063972304,52.6318898132612,22.8493712419641,13.9039975930434,46.6979083863878,26.4981724694926,32.5072408549513,6.05626705039726,32.0816193535795,35.6727335589304,42.6640021891999,0.216491041011214,0,1.51657333504435,17.5843174767352,0.776813650941515,1.48442139064825,0.693941307064543,0.913396434936424,3.92046345335299,1.50722640552623,4.35078216402108,2.01066546127481,1.48316980640624,4.77177877835708,1.76922110389975,5.17653919831709,3.75430581382669,7.27312879702833,5.59175283654366,10.5401086924157,14.2423760633149,29.1221042937794,0.11981512450592,0,0,11.5338792341713,5.49000723382352,0.628271760564322,7.64827008846016,7.41574826257959,7.89594569326328,6.00292673350703,1.01839363850316,5.47390670684409,0.252722758433675,1.05220927943237,0.520481771850815,0,0.180062129805349,0.60281927134286,1.42876648217788,1.0249097622788,1.49922759295566,3.62184719034622,0.431135985865684,0.189106080167819,1.23165786914764,3.72632745126877,6.11703948296315,7.3132954969655,6.37924622864625,0.796137067273973,0,0,0.852490498186778,0,0.234526059981096,0.36012412292203,1.89395788468168,0.196764231747404,0.925602677324269,0.697601834251224,0.804820204198858,1.05088808130453,2.13927804887525,2.62667942526552,2.51313309592153,3.80119967305864,1.97595103761946,4.42881181909227,7.36014819974445,1.9551876352064,86.5697211417551,13.2225283331772,0.213288250535234,0,0.257734922644187,0.201683524623343,1.11189021922435,0.570676878337677,4.74529061544512,1.64698954724011,1.00534083520108,0.994782360205754,2.14460495831032,7.19055526923377,6.48414149624083,16.9270082266212,0.189667900953082,0.456994050438915,0,1.01825663922657,0.387904974335251,1.19230893813542,1.64414996523069,1.77132177575523,3.45397201251025,2.34454611451421,25.1984733024077,2.00214126859313,4.32429789249047,5.17182858485164,9.33156558387113,10.6117950291063,20.3700681425136,30.2080944323351,86.0938054175438,45.5771945892215,53.1942364151212,72.5674847953582,81.7538703560149,50.7683544673695,41.6201999370836,56.9283355208773,4.0645701836653,0.37898282354097,0.651859905768103,0,0.938760993154008,0.502518772325447,1.90434912708811,2.53673742215138,0.945810864637146,2.21464689648775,2.07291199254733,2.45794972073607,3.28101465545202,2.89298117163023,0,0,280.79739989387,466.057164508693,8.50918126935297,8.43924143463863,1.80328439914343,4.79694761688309,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,3.21321316421807,7.09700426041343,3.5613120733451,2.44330439030364,5.1140738121486,1.32745138339963,0.728341908464944,0.604647113929502,1.13163047853539,1.47650946440386,3.3817866273832,4.65170927702798,3.27180356529755,2.49548164869305,0.948110273807448,5.27093042874994,0,1.02131881726136,0.540183282093931,1.16422815404479,1.28602221018955,0.532020700926821,1.60531935841864,1.64549020602121,2.43571959291679,1.64270195644597,1.27099242518292,0.882113592219848,6.43056386471772,4.35953952078945,3.92034012033013,6.80422360817878,7.55048138827282,2.91480836629851,9.08583979851498,0.170870880797853,1.03193433981611,0.925972636848558,0.188368457004691,0.546776910884101,0.228778173206523,0.339956859987711,0.839708713941948,0.829199842826543,4.77335309007557,0,1.21991680276109,0.324016022465404,1.25452977608681,2.18362563746178,2.42755823492677,9.75310777558964,3.92633912976044,2.20345454596048,9.32008969630389,0,0.897099276263873,0.330916980914195,1.36115831840833,0.258319646955462,0.168956125490778,0.469428954583016,1.5624526181274,0.104859344425711,0,1.15212002503146,0.632022241256357,5.6763060281246,2.05421914329655,0.51968329191118,0.716106782669926,1.39076948346885,0.360586348559907,0.443068581523732,0.302899349844443,0.304827226619999,0.201652370273681,0.487289403698762,0.288635524920988,1.05189211963412,6.12172035761071,0,0,0,2.31827512838629,12.0116784288756,6.04400360081975,12.4333659865858,2.00628841614145,9.60078132449013,9.66682996665071,14.3223878359849,9.96748457593388,9.59115527678899,7.55393897389701,4.72515750162264,7.65546045481175,6.34399372577886,8.28416498802912,0,0.798049746802062,1.53660245178721,3.40349403895612,1.67690530102386,3.8607136774503,2.889207461421,4.12070114477788,2.88827288632634,2.77966932940177,4.81610669791456,3.2066478035633,3.93294331373506,3.52138338226781,3.79074095107048,2.38146845641537,3.70829843023538,3.27945674788299,5.35711671044299,3.82717192349433,5.48590803816665,3.01708870470874,2.86123427936785,2.47088908274958,4.42314087952054,3.13074049199203,4.39027134894654,2.63069711437843,3.25929873230068,3.92799590160417,3.79632057997357,3.54616136552028,0.818462086339379,3.25367366490529,4.05103883060397,1.99848462350357,4.44470056046276,12.4625211348013,5.16478496585877,6.83833399270498,7.18790290423307|short_description=p1@Fam20a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:208659 | |||
|HGNC= | |||
|MCL_coexpression_id=157 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CID3,uniprot:A2AGP7 | |||
|association_with_transcript=0bp_to_ENSMUST00000020938,ENSMUST00000155559,NM_153782,uc007mcv.1,uc007mcw.1_5end | |||
|cluster_id=chr11:109583528..109583603,- | |||
|description=CAGE_peak_1_at_Fam20a_5end | |||
|id=chr11:109583528..109583603,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!3.85e-14!25;UBERON:0002330!3.85e-14!25;UBERON:0009854!1.70e-12!23;UBERON:0009856!1.70e-12!23;UBERON:0002107!2.57e-12!22;UBERON:0007499!2.57e-12!22;UBERON:0006925!2.57e-12!22;UBERON:0009497!2.57e-12!22;UBERON:0000015!2.57e-12!22;UBERON:0002423!2.57e-12!22;UBERON:0006235!2.57e-12!22;UBERON:0008835!2.57e-12!22;UBERON:0003894!2.57e-12!22;UBERON:0004161!2.57e-12!22;UBERON:0008836!2.57e-12!22;UBERON:0004111!1.65e-09!122;UBERON:0000025!2.41e-08!114;UBERON:0005256!9.29e-08!47;UBERON:0003914!5.84e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.59e-15,25;UBERON:0002330,8.59e-15,25;UBERON:0009854,4.60e-13,23;UBERON:0009856,4.60e-13,23;UBERON:0002107,7.11e-13,22;UBERON:0007499,7.11e-13,22;UBERON:0006925,7.11e-13,22;UBERON:0009497,7.11e-13,22;UBERON:0000015,7.11e-13,22;UBERON:0002423,7.11e-13,22;UBERON:0006235,7.11e-13,22;UBERON:0008835,7.11e-13,22;UBERON:0003894,7.11e-13,22;UBERON:0004161,7.11e-13,22;UBERON:0008836,7.11e-13,22;UBERON:0004111,5.32e-08,122;UBERON:0005256,2.45e-07,45;UBERON:0000025,4.93e-07,114 | |||
|phase1_expression=4.80446541314382,0.348975407639361,0.909998478779072,0,0,1.00727563147134,1.40167584357315,0,0,0,0,0,0.171200729931206,0,0.666219523631325,0,0,0,0,0,2.89147186513637,0.595745707205312,0,2.07990149631429,1.14704640533585,1.72269589234506,0.430761996159075,1.07735616342945,0.190023419456374,1.00812051903972,0,0,0,0,6.06588401477677,3.98963148860382,6.12508068787107,0,0,0,0,0,0,3.27331726736501,2.83855407414641,0.550640256485045,3.12956537739216,0.218025156380447,0.659058548203415,0.194429899074283,3.63964696225943,0,0,2.17608642603403,0,18.2654199585522,11.4613375975503,10.8291139378263,0.202316460859598,0,0,3.72728985276045,4.4464739805557,6.74924787961049,13.8441290759376,10.6572017241915,8.08920298399693,6.53171119046643,0.207379224616955,0,0.420649922702764,9.42648248532552,8.1721360152097,0.122490799214954,0.575072826109418,0.919218786610021,5.50579404996943,3.06449611404451,3.68655679814984,0.659431438650969,0.365950574409639,1.04182674111352,3.90856198601933,6.19038871034848,5.19514042441154,10.0173719061047,5.83723891276322,2.42319279572891,0.075726193333184,0.453429360640713,19.7107852317141,19.7897491705719,15.6393406752783,51.8115063972304,52.6318898132612,22.8493712419641,13.9039975930434,46.6979083863878,26.4981724694926,32.5072408549513,6.05626705039726,32.0816193535795,35.6727335589304,42.6640021891999,0.216491041011214,0,1.51657333504435,17.5843174767352,0.776813650941515,1.48442139064825,0.693941307064543,0.913396434936424,3.92046345335299,1.50722640552623,4.35078216402108,2.01066546127481,1.48316980640624,4.77177877835708,1.76922110389975,5.17653919831709,3.75430581382669,7.27312879702833,5.59175283654366,10.5401086924157,14.2423760633149,29.1221042937794,0.11981512450592,0,0,11.5338792341713,5.49000723382352,0.628271760564322,7.64827008846016,7.41574826257959,7.89594569326328,6.00292673350703,1.01839363850316,5.47390670684409,0.252722758433675,1.05220927943237,0.520481771850815,0,0.180062129805349,0.60281927134286,1.42876648217788,1.0249097622788,1.49922759295566,3.62184719034622,0.431135985865684,0.189106080167819,1.23165786914764,3.72632745126877,6.11703948296315,7.3132954969655,6.37924622864625,0.796137067273973,0,0,0.852490498186778,0,0.234526059981096,0.36012412292203,1.89395788468168,0.196764231747404,0.925602677324269,0.697601834251224,0.804820204198858,1.05088808130453,2.13927804887525,2.62667942526552,2.51313309592153,3.80119967305864,1.97595103761946,4.42881181909227,7.36014819974445,1.9551876352064,86.5697211417551,13.2225283331772,0.213288250535234,0,0.257734922644187,0.201683524623343,1.11189021922435,0.570676878337677,4.74529061544512,1.64698954724011,1.00534083520108,0.994782360205754,2.14460495831032,7.19055526923377,6.48414149624083,16.9270082266212,0.189667900953082,0.456994050438915,0,1.01825663922657,0.387904974335251,1.19230893813542,1.64414996523069,1.77132177575523,3.45397201251025,2.34454611451421,25.1984733024077,2.00214126859313,4.32429789249047,5.17182858485164,9.33156558387113,10.6117950291063,20.3700681425136,30.2080944323351,86.0938054175438,45.5771945892215,53.1942364151212,72.5674847953582,81.7538703560149,50.7683544673695,41.6201999370836,56.9283355208773,4.0645701836653,0.37898282354097,0.651859905768103,0,0.938760993154008,0.502518772325447,1.90434912708811,2.53673742215138,0.945810864637146,2.21464689648775,2.07291199254733,2.45794972073607,3.28101465545202,2.89298117163023,0,0,280.79739989387,466.057164508693,8.50918126935297,8.43924143463863,1.80328439914343,4.79694761688309,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,3.21321316421807,7.09700426041343,3.5613120733451,2.44330439030364,5.1140738121486,1.32745138339963,0.728341908464944,0.604647113929502,1.13163047853539,1.47650946440386,3.3817866273832,4.65170927702798,3.27180356529755,2.49548164869305,0.948110273807448,5.27093042874994,0,1.02131881726136,0.540183282093931,1.16422815404479,1.28602221018955,0.532020700926821,1.60531935841864,1.64549020602121,2.43571959291679,1.64270195644597,1.27099242518292,0.882113592219848,6.43056386471772,4.35953952078945,3.92034012033013,6.80422360817878,7.55048138827282,2.91480836629851,9.08583979851498,0.170870880797853,1.03193433981611,0.925972636848558,0.188368457004691,0.546776910884101,0.228778173206523,0.339956859987711,0.839708713941948,0.829199842826543,4.77335309007557,0,1.21991680276109,0.324016022465404,1.25452977608681,2.18362563746178,2.42755823492677,9.75310777558964,3.92633912976044,2.20345454596048,9.32008969630389,0,0.897099276263873,0.330916980914195,1.36115831840833,0.258319646955462,0.168956125490778,0.469428954583016,1.5624526181274,0.104859344425711,0,1.15212002503146,0.632022241256357,5.6763060281246,2.05421914329655,0.51968329191118,0.716106782669926,1.39076948346885,0.360586348559907,0.443068581523732,0.302899349844443,0.304827226619999,0.201652370273681,0.487289403698762,0.288635524920988,1.05189211963412,6.12172035761071,0,0,0,2.31827512838629,12.0116784288756,6.04400360081975,12.4333659865858,2.00628841614145,9.60078132449013,9.66682996665071,14.3223878359849,9.96748457593388,9.59115527678899,7.55393897389701,4.72515750162264,7.65546045481175,6.34399372577886,8.28416498802912,0,0.798049746802062,1.53660245178721,3.40349403895612,1.67690530102386,3.8607136774503,2.889207461421,4.12070114477788,2.88827288632634,2.77966932940177,4.81610669791456,3.2066478035633,3.93294331373506,3.52138338226781,3.79074095107048,2.38146845641537,3.70829843023538,3.27945674788299,5.35711671044299,3.82717192349433,5.48590803816665,3.01708870470874,2.86123427936785,2.47088908274958,4.42314087952054,3.13074049199203,4.39027134894654,2.63069711437843,3.25929873230068,3.92799590160417,3.79632057997357,3.54616136552028,0.818462086339379,3.25367366490529,4.05103883060397,1.99848462350357,4.44470056046276,12.4625211348013,5.16478496585877,6.83833399270498,7.18790290423307 | |||
|short_description=p1@Fam20a | |||
}} |
Revision as of 09:19, 5 August 2015
Short description: | p1@Fam20a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam20a_5end |
Coexpression cluster: | MCL_coexpression_mm9:157 |
Association with transcript: | 0bp_to_ENSMUST00000020938, ENSMUST00000155559, NM_153782, uc007mcv.1, uc007mcw.1_5end |
EntrezGene: | 208659 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 8.59e-15 | 25 |
exocrine system | 8.59e-15 | 25 |
digestive tract diverticulum | 4.60e-13 | 23 |
sac | 4.60e-13 | 23 |
liver | 7.11e-13 | 22 |
epithelial sac | 7.11e-13 | 22 |
digestive gland | 7.11e-13 | 22 |
epithelium of foregut-midgut junction | 7.11e-13 | 22 |
anatomical boundary | 7.11e-13 | 22 |
hepatobiliary system | 7.11e-13 | 22 |
foregut-midgut junction | 7.11e-13 | 22 |
hepatic diverticulum | 7.11e-13 | 22 |
liver primordium | 7.11e-13 | 22 |
septum transversum | 7.11e-13 | 22 |
liver bud | 7.11e-13 | 22 |
anatomical conduit | 5.32e-08 | 122 |
trunk mesenchyme | 2.45e-07 | 45 |
tube | 4.93e-07 | 114 |