FFCP PHASE1:Mm9::chr11:107776320..107776353,-: Difference between revisions
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{{FFCP|EntrezGene=140723|HGNC=|MCL_coexpression_id=93|UniProt=Q8VHW4,Q544Q4|association_with_transcript=15bp_to_ENSMUST00000039071,NM_001199301,uc007mbc.1_5end|description=CAGE_peak_1_at_Cacng5_5end|id=chr11:107776320..107776353,-|ontology_enrichment_celltype=CL:0000221!5.02e-19!44;CL:0000133!5.02e-19!44;CL:0002319!1.46e-18!43;CL:0000540!1.85e-15!33;CL:0000047!1.85e-15!33;CL:0000031!1.85e-15!33;CL:0000404!1.85e-15!33;CL:0000055!5.01e-13!50;CL:0000117!1.85e-12!23;CL:0000337!1.85e-12!23;CL:0000393!1.41e-10!39;CL:0000211!1.41e-10!39|ontology_enrichment_celltype_v019_2=CL:0000221,2.87e-25,44;CL:0000133,2.87e-25,44;CL:0002319,1.27e-24,43;CL:0000540,2.82e-20,33;CL:0000047,2.82e-20,33;CL:0000031,2.82e-20,33;CL:0000404,2.82e-20,33;CL:0000117,1.13e-15,23;CL:0000337,1.13e-15,23;CL:0000393,2.01e-15,39;CL:0000211,2.01e-15,39;CL:0002321,1.02e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.28e-36!102;UBERON:0000924!1.28e-36!102;UBERON:0006601!1.28e-36!102;UBERON:0001017!2.39e-34!73;UBERON:0005743!2.39e-34!73;UBERON:0000073!3.71e-34!75;UBERON:0001016!3.71e-34!75;UBERON:0002346!4.70e-31!71;UBERON:0003075!4.70e-31!71;UBERON:0007284!4.70e-31!71;UBERON:0000033!7.11e-25!63;UBERON:0001049!3.67e-22!52;UBERON:0005068!3.67e-22!52;UBERON:0006241!3.67e-22!52;UBERON:0007135!3.67e-22!52;UBERON:0000955!4.97e-21!50;UBERON:0006238!4.97e-21!50;UBERON:0002616!3.13e-20!49;UBERON:0003056!8.53e-20!49;UBERON:0003080!1.72e-15!40;UBERON:0002020!2.41e-15!34;UBERON:0002780!8.70e-15!39;UBERON:0001890!8.70e-15!39;UBERON:0006240!8.70e-15!39;UBERON:0007811!9.01e-13!86;UBERON:0002791!4.37e-12!29;UBERON:0003528!4.37e-12!29;UBERON:0001893!4.37e-12!29;UBERON:0000153!3.21e-10!94;UBERON:0000956!1.75e-08!21;UBERON:0001869!1.75e-08!21;UBERON:0000203!1.75e-08!21;UBERON:0003076!1.91e-07!12;UBERON:0003057!1.91e-07!12;UBERON:0002619!7.07e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.37e-43,73;UBERON:0001016,9.52e-43,75;UBERON:0004121,6.95e-42,95;UBERON:0000924,6.95e-42,95;UBERON:0006601,6.95e-42,95;UBERON:0002346,9.60e-34,64;UBERON:0003075,9.60e-34,64;UBERON:0007284,9.60e-34,64;UBERON:0010371,7.02e-30,73;UBERON:0000073,1.62e-28,54;UBERON:0001049,2.29e-26,52;UBERON:0005068,2.29e-26,52;UBERON:0006241,2.29e-26,52;UBERON:0007135,2.29e-26,52;UBERON:0010314,3.70e-25,92;UBERON:0003056,4.01e-22,49;UBERON:0000955,6.45e-22,47;UBERON:0006238,6.45e-22,47;UBERON:0002616,6.91e-21,46;UBERON:0002020,9.49e-20,34;UBERON:0003080,4.28e-17,40;UBERON:0002780,3.54e-16,39;UBERON:0001890,3.54e-16,39;UBERON:0006240,3.54e-16,39;UBERON:0003528,2.83e-15,29;UBERON:0002791,2.83e-15,29;UBERON:0001893,2.83e-15,29;UBERON:0000956,2.54e-10,21;UBERON:0001869,2.54e-10,21;UBERON:0000203,2.54e-10,21;UBERON:0003076,3.62e-10,12;UBERON:0003057,3.62e-10,12;UBERON:0002619,3.99e-08,17;UBERON:0002240,8.54e-07,6;UBERON:0005174,8.54e-07,6;UBERON:0001137,8.54e-07,6|phase1_expression=5.76535849577258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.8402892306206,5.4921545683618,2.52758868796568,8.9591309840232,7.18762821824858,0,0,0,0,0,0,6.87875966922632,10.0508286061686,8.87363964908651,0.677689064138264,1.77858959222228,0,0,0,22.7696083993988,33.0427742576537,2.69592992002042,2.8351247049655,2.3135745748652,19.7099179238624,15.6816664075646,0.734944795289724,1.24599112323707,2.75765635983006,15.4162233399144,27.7081523644857,19.3544231902867,2.63772575460388,2.01272815925301,1.04182674111352,14.5175159480718,11.8180148106653,12.835052813252,17.6777151284201,15.8032565687004,6.15118171223492,0.075726193333184,1.058001841495,0,0,0,0,0,0,1.12355536105401,0,0,0,3.66192891419369,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,3.46970653532272,5.78484408793068,5.99600292865752,4.97384713823654,3.29248379979973,0.753999547978053,0,0.144599356919912,0,0,0,0,0,40.4037499875935,36.0248335719143,0.255457055208591,0,0,0,20.9706895166752,13.2675174817402,2.63874139437015,7.82209440865244,4.60287823194595,24.5189892580281,21.415846724944,0.101839363850316,0.124406970610093,0,4.20883711772948,0.390361328888111,3.44853156650209,5.04173963454978,4.9732589885786,6.12328492361951,6.66191345481219,7.12133106653939,12.9351685369508,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,4.41608891984667,6.48299057989492,0,0,0,0.464473343720877,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0,0,0,0,0.189667900953082,0.799739588268102,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,9.9541365792431,7.73597131508541,0,0.252470927204373,2.2085575359138,1.95219372148319,5.60100834105277,5.4962823529087,13.3679204449436,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:140723 | |||
|HGNC= | |||
|MCL_coexpression_id=93 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VHW4,uniprot:Q544Q4 | |||
|association_with_transcript=15bp_to_ENSMUST00000039071,NM_001199301,uc007mbc.1_5end | |||
|cluster_id=chr11:107776320..107776353,- | |||
|description=CAGE_peak_1_at_Cacng5_5end | |||
|id=chr11:107776320..107776353,- | |||
|ontology_enrichment_celltype=CL:0000221!5.02e-19!44;CL:0000133!5.02e-19!44;CL:0002319!1.46e-18!43;CL:0000540!1.85e-15!33;CL:0000047!1.85e-15!33;CL:0000031!1.85e-15!33;CL:0000404!1.85e-15!33;CL:0000055!5.01e-13!50;CL:0000117!1.85e-12!23;CL:0000337!1.85e-12!23;CL:0000393!1.41e-10!39;CL:0000211!1.41e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.87e-25,44;CL:0000133,2.87e-25,44;CL:0002319,1.27e-24,43;CL:0000540,2.82e-20,33;CL:0000047,2.82e-20,33;CL:0000031,2.82e-20,33;CL:0000404,2.82e-20,33;CL:0000117,1.13e-15,23;CL:0000337,1.13e-15,23;CL:0000393,2.01e-15,39;CL:0000211,2.01e-15,39;CL:0002321,1.02e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.28e-36!102;UBERON:0000924!1.28e-36!102;UBERON:0006601!1.28e-36!102;UBERON:0001017!2.39e-34!73;UBERON:0005743!2.39e-34!73;UBERON:0000073!3.71e-34!75;UBERON:0001016!3.71e-34!75;UBERON:0002346!4.70e-31!71;UBERON:0003075!4.70e-31!71;UBERON:0007284!4.70e-31!71;UBERON:0000033!7.11e-25!63;UBERON:0001049!3.67e-22!52;UBERON:0005068!3.67e-22!52;UBERON:0006241!3.67e-22!52;UBERON:0007135!3.67e-22!52;UBERON:0000955!4.97e-21!50;UBERON:0006238!4.97e-21!50;UBERON:0002616!3.13e-20!49;UBERON:0003056!8.53e-20!49;UBERON:0003080!1.72e-15!40;UBERON:0002020!2.41e-15!34;UBERON:0002780!8.70e-15!39;UBERON:0001890!8.70e-15!39;UBERON:0006240!8.70e-15!39;UBERON:0007811!9.01e-13!86;UBERON:0002791!4.37e-12!29;UBERON:0003528!4.37e-12!29;UBERON:0001893!4.37e-12!29;UBERON:0000153!3.21e-10!94;UBERON:0000956!1.75e-08!21;UBERON:0001869!1.75e-08!21;UBERON:0000203!1.75e-08!21;UBERON:0003076!1.91e-07!12;UBERON:0003057!1.91e-07!12;UBERON:0002619!7.07e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.37e-43,73;UBERON:0001016,9.52e-43,75;UBERON:0004121,6.95e-42,95;UBERON:0000924,6.95e-42,95;UBERON:0006601,6.95e-42,95;UBERON:0002346,9.60e-34,64;UBERON:0003075,9.60e-34,64;UBERON:0007284,9.60e-34,64;UBERON:0010371,7.02e-30,73;UBERON:0000073,1.62e-28,54;UBERON:0001049,2.29e-26,52;UBERON:0005068,2.29e-26,52;UBERON:0006241,2.29e-26,52;UBERON:0007135,2.29e-26,52;UBERON:0010314,3.70e-25,92;UBERON:0003056,4.01e-22,49;UBERON:0000955,6.45e-22,47;UBERON:0006238,6.45e-22,47;UBERON:0002616,6.91e-21,46;UBERON:0002020,9.49e-20,34;UBERON:0003080,4.28e-17,40;UBERON:0002780,3.54e-16,39;UBERON:0001890,3.54e-16,39;UBERON:0006240,3.54e-16,39;UBERON:0003528,2.83e-15,29;UBERON:0002791,2.83e-15,29;UBERON:0001893,2.83e-15,29;UBERON:0000956,2.54e-10,21;UBERON:0001869,2.54e-10,21;UBERON:0000203,2.54e-10,21;UBERON:0003076,3.62e-10,12;UBERON:0003057,3.62e-10,12;UBERON:0002619,3.99e-08,17;UBERON:0002240,8.54e-07,6;UBERON:0005174,8.54e-07,6;UBERON:0001137,8.54e-07,6 | |||
|phase1_expression=5.76535849577258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.8402892306206,5.4921545683618,2.52758868796568,8.9591309840232,7.18762821824858,0,0,0,0,0,0,6.87875966922632,10.0508286061686,8.87363964908651,0.677689064138264,1.77858959222228,0,0,0,22.7696083993988,33.0427742576537,2.69592992002042,2.8351247049655,2.3135745748652,19.7099179238624,15.6816664075646,0.734944795289724,1.24599112323707,2.75765635983006,15.4162233399144,27.7081523644857,19.3544231902867,2.63772575460388,2.01272815925301,1.04182674111352,14.5175159480718,11.8180148106653,12.835052813252,17.6777151284201,15.8032565687004,6.15118171223492,0.075726193333184,1.058001841495,0,0,0,0,0,0,1.12355536105401,0,0,0,3.66192891419369,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,3.46970653532272,5.78484408793068,5.99600292865752,4.97384713823654,3.29248379979973,0.753999547978053,0,0.144599356919912,0,0,0,0,0,40.4037499875935,36.0248335719143,0.255457055208591,0,0,0,20.9706895166752,13.2675174817402,2.63874139437015,7.82209440865244,4.60287823194595,24.5189892580281,21.415846724944,0.101839363850316,0.124406970610093,0,4.20883711772948,0.390361328888111,3.44853156650209,5.04173963454978,4.9732589885786,6.12328492361951,6.66191345481219,7.12133106653939,12.9351685369508,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,4.41608891984667,6.48299057989492,0,0,0,0.464473343720877,0,0.403367049246685,0.444756087689741,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0,0,0,0,0.189667900953082,0.799739588268102,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,9.9541365792431,7.73597131508541,0,0.252470927204373,2.2085575359138,1.95219372148319,5.60100834105277,5.4962823529087,13.3679204449436,20.3815102167959,0,1.46127928955656,1.97643888973262,114.390388646163,0.283880170416537,0,0.977321756121456,0,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,2.04263763452273,0.540183282093931,0.258717367565509,0.214337035031592,0.886701168211368,2.14042581122485,2.96188237083818,4.56697423671899,0.469343416127421,0,1.7642271844397,0.32977250588296,0,0.0603129249281559,0,0.328281799490123,0,9.45669040253599,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0.648074866458964,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,0.168956125490778,0.352071715937262,3.3853140059427,11.4296685424025,5.31485065817213,1.72818003754719,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,2.51146472241848,0,0.183151624267265,0.214368379079066,0,4.51801474093653,1.84130094602871,4.58316410751517,1.54667864109319,3.42541259885321,3.7769694869485,2.02506750069542,1.35096360967266,1.35942722695261,2.5888015587591,0.207574695168353,1.19707462020309,0.512200817262403,1.21553358534147,1.46729213839588,0.919217542250071,0.44449345560323,1.23621034343337,1.92551525755089,1.01078884705519,0.760437899670719,2.07488975524684,0.749132059759059,0.960377286073039,1.26358031702349,0.476293691283074,0.695305955669133,1.15745532278223,0.824171801606613,1.47198920134397,0.685738504770831,0.70990322463735,0.953744759789284,1.0174249164263,2.1645157495526,0.846146078916765,1.82927972872773,1.8414879800649,1.08643291076689,0.561142271657738,0.949080144993393,1.37906275325789,1.22769312950907,0.77468420592983,0.964533054905707,4.49659040288303,1.16965804222704,1.28922632428979,2.10417165275728,1.76473135295612,0.231867835620421 | |||
|short_description=p1@Cacng5 | |||
}} |
Revision as of 08:37, 5 August 2015
Short description: | p1@Cacng5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacng5_5end |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | 15bp_to_ENSMUST00000039071, NM_001199301, uc007mbc.1_5end |
EntrezGene: | 140723 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.87e-25 | 44 |
neurectodermal cell | 2.87e-25 | 44 |
neural cell | 1.27e-24 | 43 |
neuron | 2.82e-20 | 33 |
neuronal stem cell | 2.82e-20 | 33 |
neuroblast | 2.82e-20 | 33 |
electrically signaling cell | 2.82e-20 | 33 |
CNS neuron (sensu Vertebrata) | 1.13e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-15 | 23 |
electrically responsive cell | 2.01e-15 | 39 |
electrically active cell | 2.01e-15 | 39 |
embryonic cell | 1.02e-10 | 70 |