FFCP PHASE1:Hg19::chr2:38466712..38466722,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000450854_5end | |||
|description=CAGE_peak_4_at_ENST00000450854_5end | |||
|id=chr2:38466712..38466722,- | |||
|ontology_enrichment_celltype=CL:0000153!4.68e-10!9;CL:0000447!4.68e-10!9;CL:0000197!9.99e-10!6;CL:0000098!9.99e-10!6;CL:0002167!9.99e-10!6;CL:0002580!4.97e-08!3;CL:0000667!2.88e-07!6;CL:0000058!2.88e-07!6;CL:0000138!2.88e-07!6;CL:0000499!2.93e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.79e-42;9!CL:0000447;1.79e-42;9!CL:0000327;1.42e-25;15!CL:0000138;7.82e-24;6!CL:0000214;3.63e-21;3!CL:0000499;9.51e-14;28!CL:0000151;8.85e-09;36!CL:0000062;9.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.65e-42,9;CL:0000447,1.65e-42,9;CL:0000327,1.36e-25,15;CL:0000058,5.74e-24,6;CL:0000138,5.74e-24,6;CL:0000214,4.94e-21,3;CL:0000499,9.26e-14,28;CL:0000151,1.04e-10,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;1.65e-16;1!DOID:154;6.42e-09;2!DOID:4236;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.65e-16,1;DOID:154,5.08e-09,2;DOID:4236,5.08e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.14e-21!9;UBERON:0001557!8.90e-09!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.63e-21;3!UBERON:0007616;3.63e-21;3!UBERON:0002217;3.63e-21;3!UBERON:0002018;3.63e-21;3!UBERON:0001282;1.65e-16;1!UBERON:0009842;1.65e-16;1!UBERON:0003704;1.65e-16;1!UBERON:0001171;1.65e-16;1!UBERON:0001172;1.65e-16;1!UBERON:0004457;8.58e-16;9!UBERON:0000042;8.58e-16;9!UBERON:0004905;1.53e-08;8!UBERON:0000982;1.53e-08;8!UBERON:0004770;1.53e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.94e-21,3;UBERON:0007616,4.94e-21,3;UBERON:0002217,4.94e-21,3;UBERON:0002018,4.94e-21,3;UBERON:0001282,1.21e-16,1;UBERON:0009842,1.21e-16,1;UBERON:0003704,1.21e-16,1;UBERON:0001171,1.21e-16,1;UBERON:0001172,1.21e-16,1;UBERON:0004457,6.84e-12,12;UBERON:0000042,6.84e-12,12;UBERON:0004905,1.71e-08,8;UBERON:0000982,1.71e-08,8;UBERON:0004770,1.71e-08,8 | |||
|phase1_expression=0.54503513781167,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0.579386075843295,5.5670016293577,3.40644409211845,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.842923450390509,0.482022059766964,0.441175890929576,0.871517776369625,0.949082476444386,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,1.53461973288062,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.19040304263846,2.7228134973794,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,1.47775344708365,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,2.50558466093677,0,0.0769502585037971,1.59518878185802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.379119477770928,0,0,0,0,0,0,0.853828638089378,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.219267951258557,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0.889811221596536,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0.184105950251841,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0.23806443146374,0,0,0.448527450322454,0,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ENST00000450854 | |||
}} |
Revision as of 02:40, 21 January 2014
Short description: | p4@ENST00000450854 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000450854_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000450854_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.65e-42 | 9 |
carbohydrate secreting cell | 1.65e-42 | 9 |
extracellular matrix secreting cell | 1.36e-25 | 15 |
chondroblast | 5.74e-24 | 6 |
chondrocyte | 5.74e-24 | 6 |
synovial cell | 4.94e-21 | 3 |
stromal cell | 9.26e-14 | 28 |
secretory cell | 1.04e-10 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.94e-21 | 3 |
layer of synovial tissue | 4.94e-21 | 3 |
synovial joint | 4.94e-21 | 3 |
synovial membrane of synovial joint | 4.94e-21 | 3 |
intralobular bile duct | 1.21e-16 | 1 |
acinus | 1.21e-16 | 1 |
intrahepatic bile duct | 1.21e-16 | 1 |
portal lobule | 1.21e-16 | 1 |
hepatic acinus | 1.21e-16 | 1 |
cavity lining | 6.84e-12 | 12 |
serous membrane | 6.84e-12 | 12 |
articulation | 1.71e-08 | 8 |
skeletal joint | 1.71e-08 | 8 |
articular system | 1.71e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.65e-16 | 1 |
mixed cell type cancer | 5.08e-09 | 2 |
carcinosarcoma | 5.08e-09 | 2 |