FFCP PHASE1:Hg19::chr2:38302269..38302280,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2597 | |||
|TSSclassifier=strong | |||
|UniProt=Q16678,Q5TZV6 | |||
|association_with_transcript=250bp_to_BT019979,BT020001_5end | |||
|description=CAGE_peak_6_at_CYP1B1_5end | |||
|id=chr2:38302269..38302280,- | |||
|ontology_enrichment_celltype=CL:0002057!6.44e-13!42;CL:0002194!3.45e-12!63;CL:0000576!3.45e-12!63;CL:0000040!3.45e-12!63;CL:0000559!3.45e-12!63;CL:0000766!7.24e-12!76;CL:0000839!1.79e-11!70;CL:0002009!1.99e-11!65;CL:0000860!2.30e-11!45;CL:0000557!3.94e-11!71;CL:0000763!5.43e-07!112;CL:0000049!5.43e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.33e-20;33!CL:0002057;6.33e-20;33!CL:0000473;8.59e-16;39!CL:0000234;8.59e-16;39!CL:0000576;1.03e-11;48!CL:0000153;3.58e-08;9!CL:0000447;3.58e-08;9!CL:0000138;2.73e-07;6!CL:0000766;4.67e-07;69!CL:0000135;6.31e-07;3!CL:0000388;6.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.79e-16,42;CL:0002057,4.79e-16,42;CL:0000473,5.49e-16,48;CL:0000234,5.49e-16,48;CL:0000839,2.81e-14,66;CL:0002194,3.80e-14,59;CL:0000576,3.80e-14,59;CL:0000040,3.80e-14,59;CL:0000559,3.80e-14,59;CL:0000557,5.15e-14,67;CL:0002009,1.39e-13,61;CL:0000766,8.30e-13,72;CL:0000153,3.27e-08,9;CL:0000447,3.27e-08,9;CL:0000058,1.90e-07,6;CL:0000138,1.90e-07,6;CL:0000763,1.98e-07,108;CL:0000049,1.98e-07,108;CL:0002031,2.24e-07,120;CL:0000134,5.17e-07,354;CL:0000135,5.96e-07,3;CL:0000388,5.96e-07,3;CL:0002087,9.15e-07,115;CL:0000988,9.53e-07,177;CL:0002320,9.64e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.59e-12;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.59e-11!167;UBERON:0002371!7.47e-11!80;UBERON:0001474!1.26e-10!86;UBERON:0002390!1.49e-10!102;UBERON:0003061!1.49e-10!102;UBERON:0004765!4.01e-10!101;UBERON:0001434!4.01e-10!101;UBERON:0002193!1.14e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.61e-07;10!UBERON:0007846;6.31e-07;3!UBERON:0000043;6.31e-07;3!UBERON:0007845;6.31e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.11e-16,82;UBERON:0002390,7.31e-16,98;UBERON:0003061,7.31e-16,98;UBERON:0002371,1.23e-15,76;UBERON:0004765,3.20e-14,90;UBERON:0002193,5.82e-14,108;UBERON:0001434,7.37e-14,100;UBERON:0002405,4.62e-12,93;UBERON:0002204,1.32e-11,167;UBERON:0003081,1.47e-08,203;UBERON:0002331,2.02e-07,10;UBERON:0000358,2.02e-07,10;UBERON:0000307,2.02e-07,10;UBERON:0000091,2.02e-07,10;UBERON:0000087,2.02e-07,10;UBERON:0007010,2.02e-07,10;UBERON:0007806,2.02e-07,10;UBERON:0008780,2.02e-07,10;UBERON:0005728,2.02e-07,10;UBERON:0002384,4.89e-07,371;UBERON:0007846,5.96e-07,3;UBERON:0000043,5.96e-07,3;UBERON:0007845,5.96e-07,3 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0,0,0.217010870715852,0.671746422719773,0.971680998056939,0.77272670290256,2.61716829803216,0.755751887377619,1.69808842831471,0.232429036905685,1.23350366406548,1.23882548358041,1.7261543539329,1.5369642391746,0.945928919554341,0.689491361473237,0.645484683583826,0,0.941211697713023,1.63743690034707,0.898893937780338,0,1.60464513538047,0,1.9791078011203,2.39356389145958,2.55734850319616,0.870627715885752,0,0.622822248995575,2.26123798731069,0.521482918420201,2.17188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,1.44575660953827,1.50401373190767,1.88300474649071,0.795285947051099,0.486634870302636,0.756278537312543,0.443458794925128,0.527008714158756,0.0654895377488563,0,0,0.97364218096405,1.74129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.919463387397059,0.300476117813194,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0.0920498986422993,0.646584227275248,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0.0895585227028483,0,0,8.86793828212698,0.44024217006613,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.66004457238855,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,0,1.50677127429638,0,0.958499421966331,2.29723871668228,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0.356857977594324,0.157702415033935,0,0.902838299183157,2.27407504055985,1.03473071292505,0.664225598535437,0.553107505625109,0,0.587403472388222,0,0,0.215714200818617,0,0,0,0,1.24053903909388,0.306923946576125,0,0.768834895534206,1.02341449813341,0.804269605718038,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.15350367472613,0,0.644521469209642,0.580066775656914,0.511359764496605,0,0.330569830721956,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.744316738719335,0.632758849437452,3.0500831027812,0,1.28381696410176,0.318203247925937,0,0,0.274537029736055,0.471249609382746,0,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,1.05553817648832,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.798317485731266,0.957526850661834,0,0,0,0,0,0,0,0.481764225311099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.61221999997337,0.724999575434793,0.455173793141999,1.01701460117107,0.709163045303809,0,0,0,0,0,0,0,0,0.219385397153973,0.762569244632931,0,0.923403102045565,0,0,0,0,0,0,0,0,0.784901281975124,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,1.18608451472249,1.35920332841153,1.35748534357092,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0,2.65383634439649,0,0,0,0,0,0,0,0,0,0,0.609414446062818,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.316553979779393,0,0.0801588202515337,0.213452994739353,0,0.576361668616424,0,0,0.288109595976299,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.314727528809989,0,0,0,0,1.32418394073086,0,0.542999601753713,0,0,0,0.492555124496034,0.170388021785422,0,0,0,0,0,0.342173675768659,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0.553394539744923,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,2.0125432140206,2.66943366478961,0.228840068396924,0.302461847526478,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0.343395705182793,1.34699795506368,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39984875025916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,1.5913297769302,0.9025239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| |||
|short_description=p6@CYP1B1 | |||
}} |
Revision as of 02:39, 21 January 2014
Short description: | p6@CYP1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CYP1B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 250bp_to_BT019979, BT020001_5end |
EntrezGene: | CYP1B1 |
HGNC: | 2597 |
UniProt: | Q16678Q5TZV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.79e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.79e-16 | 42 |
defensive cell | 5.49e-16 | 48 |
phagocyte | 5.49e-16 | 48 |
myeloid lineage restricted progenitor cell | 2.81e-14 | 66 |
monopoietic cell | 3.80e-14 | 59 |
monocyte | 3.80e-14 | 59 |
monoblast | 3.80e-14 | 59 |
promonocyte | 3.80e-14 | 59 |
granulocyte monocyte progenitor cell | 5.15e-14 | 67 |
macrophage dendritic cell progenitor | 1.39e-13 | 61 |
myeloid leukocyte | 8.30e-13 | 72 |
GAG secreting cell | 3.27e-08 | 9 |
carbohydrate secreting cell | 3.27e-08 | 9 |
chondroblast | 1.90e-07 | 6 |
chondrocyte | 1.90e-07 | 6 |
myeloid cell | 1.98e-07 | 108 |
common myeloid progenitor | 1.98e-07 | 108 |
hematopoietic lineage restricted progenitor cell | 2.24e-07 | 120 |
mesenchymal cell | 5.17e-07 | 354 |
fibrocyte | 5.96e-07 | 3 |
tendon cell | 5.96e-07 | 3 |
nongranular leukocyte | 9.15e-07 | 115 |
hematopoietic cell | 9.53e-07 | 177 |
connective tissue cell | 9.64e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.11e-16 | 82 |
hematopoietic system | 7.31e-16 | 98 |
blood island | 7.31e-16 | 98 |
bone marrow | 1.23e-15 | 76 |
skeletal element | 3.20e-14 | 90 |
hemolymphoid system | 5.82e-14 | 108 |
skeletal system | 7.37e-14 | 100 |
immune system | 4.62e-12 | 93 |
musculoskeletal system | 1.32e-11 | 167 |
lateral plate mesoderm | 1.47e-08 | 203 |
umbilical cord | 2.02e-07 | 10 |
blastocyst | 2.02e-07 | 10 |
blastula | 2.02e-07 | 10 |
bilaminar disc | 2.02e-07 | 10 |
inner cell mass | 2.02e-07 | 10 |
cleaving embryo | 2.02e-07 | 10 |
connecting stalk | 2.02e-07 | 10 |
inner cell mass derived epiblast | 2.02e-07 | 10 |
extraembryonic mesoderm | 2.02e-07 | 10 |
connective tissue | 4.89e-07 | 371 |
dense regular connective tissue | 5.96e-07 | 3 |
tendon | 5.96e-07 | 3 |
regular connective tissue | 5.96e-07 | 3 |