FFCP PHASE1:Mm9::chr11:103510844..103510871,+: Difference between revisions
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{{FFCP|EntrezGene=104582|HGNC=|MCL_coexpression_id=2|UniProt=Q3URD2,B2RV63|association_with_transcript=21bp_to_ENSMUST00000057870,NM_001033212,uc007lvn.1_5end|description=CAGE_peak_1_at_Rprml_5end|id=chr11:103510844..103510871,+|ontology_enrichment_celltype=CL:0000540!1.39e-11!33;CL:0000047!1.39e-11!33;CL:0000031!1.39e-11!33;CL:0000404!1.39e-11!33;CL:0000117!2.78e-09!23;CL:0000337!2.78e-09!23;CL:0000393!6.35e-08!39;CL:0000211!6.35e-08!39;CL:0002319!1.15e-07!43;CL:0000221!3.17e-07!44;CL:0000133!3.17e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,9.56e-09,33;CL:0000047,9.56e-09,33;CL:0000031,9.56e-09,33;CL:0000404,9.56e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.30e-22!75;UBERON:0001016!6.30e-22!75;UBERON:0001017!9.92e-22!73;UBERON:0005743!9.92e-22!73;UBERON:0000955!9.77e-19!50;UBERON:0006238!9.77e-19!50;UBERON:0001049!2.65e-18!52;UBERON:0005068!2.65e-18!52;UBERON:0006241!2.65e-18!52;UBERON:0007135!2.65e-18!52;UBERON:0002616!5.28e-18!49;UBERON:0002020!4.20e-16!34;UBERON:0003080!1.63e-15!40;UBERON:0002780!4.43e-15!39;UBERON:0001890!4.43e-15!39;UBERON:0006240!4.43e-15!39;UBERON:0002791!1.90e-14!29;UBERON:0003528!1.90e-14!29;UBERON:0001893!1.90e-14!29;UBERON:0002346!5.86e-13!71;UBERON:0003075!5.86e-13!71;UBERON:0007284!5.86e-13!71;UBERON:0004121!1.12e-12!102;UBERON:0000924!1.12e-12!102;UBERON:0006601!1.12e-12!102;UBERON:0000033!2.71e-12!63;UBERON:0003056!2.49e-11!49;UBERON:0000956!1.14e-10!21;UBERON:0001869!1.14e-10!21;UBERON:0000203!1.14e-10!21;UBERON:0002619!5.75e-10!17;UBERON:0002021!2.51e-09!10;UBERON:0000411!2.51e-09!10;UBERON:0001950!2.51e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.48e-26,73;UBERON:0000073,4.03e-25,54;UBERON:0001016,8.49e-25,75;UBERON:0001049,1.19e-22,52;UBERON:0005068,1.19e-22,52;UBERON:0006241,1.19e-22,52;UBERON:0007135,1.19e-22,52;UBERON:0003080,3.92e-22,40;UBERON:0000955,7.87e-22,47;UBERON:0006238,7.87e-22,47;UBERON:0002780,2.17e-21,39;UBERON:0001890,2.17e-21,39;UBERON:0006240,2.17e-21,39;UBERON:0002616,1.10e-20,46;UBERON:0002020,2.56e-20,34;UBERON:0002346,4.45e-20,64;UBERON:0003075,4.45e-20,64;UBERON:0007284,4.45e-20,64;UBERON:0003528,1.77e-19,29;UBERON:0002791,1.77e-19,29;UBERON:0001893,1.77e-19,29;UBERON:0002619,1.38e-17,17;UBERON:0004121,9.56e-17,95;UBERON:0000924,9.56e-17,95;UBERON:0006601,9.56e-17,95;UBERON:0003056,2.37e-16,49;UBERON:0010371,3.46e-16,73;UBERON:0000956,2.20e-15,21;UBERON:0001869,2.20e-15,21;UBERON:0000203,2.20e-15,21;UBERON:0002021,3.22e-15,10;UBERON:0000411,3.22e-15,10;UBERON:0001950,3.22e-15,10;UBERON:0010314,1.40e-10,92;UBERON:0000025,1.14e-07,114;UBERON:0011216,3.13e-07,194|phase1_expression=0,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,3.86122325397347,5.37309073369709,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,5.27268398936633,0,0,1.59992422793407,2.2940928106717,0,0.86152399231815,1.29282739611533,1.52018735565099,1.51218077855958,2.66076612786366,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.945041568321835,0.210324961351382,1.99955689082663,2.65042249141936,3.06226998037385,1.72521847832825,5.51531271966013,7.70811166995721,5.61824287574826,3.07213066512487,0.659431438650969,0.365950574409639,1.04182674111352,1.95428099300967,3.93933827022176,8.09830713217094,0.883885756421003,1.70846016958924,0.186399445825301,0.075726193333184,0.68014404096107,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0.484875253135222,0,1.17112318804619,0.41889341362691,0.766371165625774,0,0,0,1.49790639404823,25.6200337578431,8.54449594367478,25.7259993884569,29.407277592988,6.2336413367868,17.3598151482501,0.101839363850316,0.373220911830279,2.77995034277042,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0,0,0.59710280045548,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,36.380161101594,18.0083071663748,0,0.793351699990633,0,0,0,0.201683524623343,0,0.951128130562796,0.474529061544512,0.823494773620054,2.01068167040216,1.39269530428806,1.16978452271472,0,0.648414149624083,0.796565093017469,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40179147216586,0,0,0,0,0,0,0,0,0,0.318909537314974,1.14704320301017,1.20879487306127,1.88043776155965,0,0,0,0.275936746304732,1.60550589987792,0.937693492737625,0,0,1.26203287766503,2.34263246577983,3.01592756825919,0.238968797952552,0.222798674082394,0.283076530788832,2.02405350837447,2.33804686329049,3.55759000151871,28.276275845119,0.141940085208269,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0,0,0,0,2.04263763452273,0,0,0,1.06404140185364,1.24858172321449,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:104582 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3URD2,uniprot:B2RV63 | |||
|association_with_transcript=21bp_to_ENSMUST00000057870,NM_001033212,uc007lvn.1_5end | |||
|cluster_id=chr11:103510844..103510871,+ | |||
|description=CAGE_peak_1_at_Rprml_5end | |||
|id=chr11:103510844..103510871,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.39e-11!33;CL:0000047!1.39e-11!33;CL:0000031!1.39e-11!33;CL:0000404!1.39e-11!33;CL:0000117!2.78e-09!23;CL:0000337!2.78e-09!23;CL:0000393!6.35e-08!39;CL:0000211!6.35e-08!39;CL:0002319!1.15e-07!43;CL:0000221!3.17e-07!44;CL:0000133!3.17e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.56e-09,33;CL:0000047,9.56e-09,33;CL:0000031,9.56e-09,33;CL:0000404,9.56e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.30e-22!75;UBERON:0001016!6.30e-22!75;UBERON:0001017!9.92e-22!73;UBERON:0005743!9.92e-22!73;UBERON:0000955!9.77e-19!50;UBERON:0006238!9.77e-19!50;UBERON:0001049!2.65e-18!52;UBERON:0005068!2.65e-18!52;UBERON:0006241!2.65e-18!52;UBERON:0007135!2.65e-18!52;UBERON:0002616!5.28e-18!49;UBERON:0002020!4.20e-16!34;UBERON:0003080!1.63e-15!40;UBERON:0002780!4.43e-15!39;UBERON:0001890!4.43e-15!39;UBERON:0006240!4.43e-15!39;UBERON:0002791!1.90e-14!29;UBERON:0003528!1.90e-14!29;UBERON:0001893!1.90e-14!29;UBERON:0002346!5.86e-13!71;UBERON:0003075!5.86e-13!71;UBERON:0007284!5.86e-13!71;UBERON:0004121!1.12e-12!102;UBERON:0000924!1.12e-12!102;UBERON:0006601!1.12e-12!102;UBERON:0000033!2.71e-12!63;UBERON:0003056!2.49e-11!49;UBERON:0000956!1.14e-10!21;UBERON:0001869!1.14e-10!21;UBERON:0000203!1.14e-10!21;UBERON:0002619!5.75e-10!17;UBERON:0002021!2.51e-09!10;UBERON:0000411!2.51e-09!10;UBERON:0001950!2.51e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.48e-26,73;UBERON:0000073,4.03e-25,54;UBERON:0001016,8.49e-25,75;UBERON:0001049,1.19e-22,52;UBERON:0005068,1.19e-22,52;UBERON:0006241,1.19e-22,52;UBERON:0007135,1.19e-22,52;UBERON:0003080,3.92e-22,40;UBERON:0000955,7.87e-22,47;UBERON:0006238,7.87e-22,47;UBERON:0002780,2.17e-21,39;UBERON:0001890,2.17e-21,39;UBERON:0006240,2.17e-21,39;UBERON:0002616,1.10e-20,46;UBERON:0002020,2.56e-20,34;UBERON:0002346,4.45e-20,64;UBERON:0003075,4.45e-20,64;UBERON:0007284,4.45e-20,64;UBERON:0003528,1.77e-19,29;UBERON:0002791,1.77e-19,29;UBERON:0001893,1.77e-19,29;UBERON:0002619,1.38e-17,17;UBERON:0004121,9.56e-17,95;UBERON:0000924,9.56e-17,95;UBERON:0006601,9.56e-17,95;UBERON:0003056,2.37e-16,49;UBERON:0010371,3.46e-16,73;UBERON:0000956,2.20e-15,21;UBERON:0001869,2.20e-15,21;UBERON:0000203,2.20e-15,21;UBERON:0002021,3.22e-15,10;UBERON:0000411,3.22e-15,10;UBERON:0001950,3.22e-15,10;UBERON:0010314,1.40e-10,92;UBERON:0000025,1.14e-07,114;UBERON:0011216,3.13e-07,194 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,3.86122325397347,5.37309073369709,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,5.27268398936633,0,0,1.59992422793407,2.2940928106717,0,0.86152399231815,1.29282739611533,1.52018735565099,1.51218077855958,2.66076612786366,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.945041568321835,0.210324961351382,1.99955689082663,2.65042249141936,3.06226998037385,1.72521847832825,5.51531271966013,7.70811166995721,5.61824287574826,3.07213066512487,0.659431438650969,0.365950574409639,1.04182674111352,1.95428099300967,3.93933827022176,8.09830713217094,0.883885756421003,1.70846016958924,0.186399445825301,0.075726193333184,0.68014404096107,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0.484875253135222,0,1.17112318804619,0.41889341362691,0.766371165625774,0,0,0,1.49790639404823,25.6200337578431,8.54449594367478,25.7259993884569,29.407277592988,6.2336413367868,17.3598151482501,0.101839363850316,0.373220911830279,2.77995034277042,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0,0,0.59710280045548,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,36.380161101594,18.0083071663748,0,0.793351699990633,0,0,0,0.201683524623343,0,0.951128130562796,0.474529061544512,0.823494773620054,2.01068167040216,1.39269530428806,1.16978452271472,0,0.648414149624083,0.796565093017469,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40179147216586,0,0,0,0,0,0,0,0,0,0.318909537314974,1.14704320301017,1.20879487306127,1.88043776155965,0,0,0,0.275936746304732,1.60550589987792,0.937693492737625,0,0,1.26203287766503,2.34263246577983,3.01592756825919,0.238968797952552,0.222798674082394,0.283076530788832,2.02405350837447,2.33804686329049,3.55759000151871,28.276275845119,0.141940085208269,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0,0,0,0,2.04263763452273,0,0,0,1.06404140185364,1.24858172321449,0.493647061806363,1.8267896946876,0.23467170806371,1.90648863777438,0,0.65954501176592,0,0,0.119372344003136,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.518459893167171,0,1.12738587736838,0.897099276263873,1.15820943319968,2.91676782516071,3.87479470433193,4.89972763923257,1.99507305697782,1.95306577265925,3.46035836604846,2.41584120826006,0.864090018773596,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0,0,0.563047426353546,0,0,0,38.4031252979605,58.9216302729186,54.9979692901821,71.490923854974,53.4364365421101,46.8344216381614,50.6266875173854,45.9327627288705,33.9856806738153,38.3142630696347,0,0,0,0,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.561849044819294,0.192075457214608,0.17230640686684,0.952587382566147,0.347652977834566,0.964546102318525,0.412085900803307,0.147198920134397,2.74295401908332,0.70990322463735,0,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0.118635018124174,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p1@Rprml | |||
}} |
Revision as of 06:33, 5 August 2015
Short description: | p1@Rprml |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rprml_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 21bp_to_ENSMUST00000057870, NM_001033212, uc007lvn.1_5end |
EntrezGene: | 104582 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.56e-09 | 33 |
neuronal stem cell | 9.56e-09 | 33 |
neuroblast | 9.56e-09 | 33 |
electrically signaling cell | 9.56e-09 | 33 |