FFCP PHASE1:Hg19::chr2:30144040..30144047,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=238 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=427 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UM73 | |||
|association_with_transcript=384bp_to_ENST00000389048,uc002rmy.2_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_19_at_ALK_5end | |||
|id=chr2:30144040..30144047,- | |||
|ontology_enrichment_celltype=CL:0000333!1.15e-09!41;CL:0002605!1.30e-09!3;CL:0000133!6.36e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!1.34e-37!6;DOID:171!6.42e-23!10;DOID:3095!7.93e-11!22;DOID:2994!7.93e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!6.33e-45!5;UBERON:0002410!6.33e-45!5;UBERON:0001874!3.58e-26!1;UBERON:0000010!2.27e-25!8;UBERON:0000073!2.48e-16!94;UBERON:0001016!2.48e-16!94;UBERON:0002148!1.07e-13!2;UBERON:0009662!1.07e-13!2;UBERON:0001870!1.55e-13!2;UBERON:0002308!4.94e-12!9;UBERON:0000125!4.94e-12!9;UBERON:0002020!9.36e-12!34;UBERON:0003528!9.36e-12!34;UBERON:0001049!6.12e-11!57;UBERON:0005068!6.12e-11!57;UBERON:0006241!6.12e-11!57;UBERON:0007135!6.12e-11!57;UBERON:0002616!1.39e-10!59;UBERON:0002780!6.74e-10!41;UBERON:0001890!6.74e-10!41;UBERON:0006240!6.74e-10!41;UBERON:0003080!1.12e-09!42;UBERON:0005383!1.19e-09!3;UBERON:0005382!1.19e-09!3;UBERON:0000988!1.41e-09!3;UBERON:0006331!1.41e-09!3;UBERON:0004121!3.38e-09!169;UBERON:0000924!5.50e-09!173;UBERON:0006601!5.50e-09!173;UBERON:0000955!5.64e-09!69;UBERON:0006238!5.64e-09!69;UBERON:0001017!1.30e-07!82;UBERON:0000369!1.49e-07!4;UBERON:0002435!1.49e-07!4;UBERON:0000204!1.49e-07!4;UBERON:0010082!1.49e-07!4;UBERON:0001869!2.03e-07!32;UBERON:0003075!2.36e-07!86;UBERON:0007284!2.36e-07!86;UBERON:0005743!2.84e-07!86;UBERON:0002791!3.22e-07!33;UBERON:0002346!4.89e-07!90;UBERON:0001893!4.98e-07!34;UBERON:0003056!8.00e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,3.5582187760905,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@ALK | |||
}} |
Revision as of 02:26, 21 January 2014
Short description: | p19@ALK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ALK_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 384bp_to_ENST00000389048, uc002rmy.2_5end |
EntrezGene: | ALK |
HGNC: | 427 |
UniProt: | Q9UM73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |