FFCP PHASE1:Hg19::chr2:241508039..241508084,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10079 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HAU8 | |||
|association_with_transcript=-19bp_to_ENST00000270357,uc002vzi.2,uc010fzf.2_5end | |||
|description=CAGE_peak_4_at_RNPEPL1_5end | |||
|id=chr2:241508039..241508084,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.01e-18!76;CL:0002057!1.36e-16!42;CL:0000839!1.27e-14!70;CL:0000860!2.29e-14!45;CL:0000557!2.96e-14!71;CL:0002194!7.79e-14!63;CL:0000576!7.79e-14!63;CL:0000040!7.79e-14!63;CL:0000559!7.79e-14!63;CL:0002009!3.13e-13!65;CL:0000738!8.90e-11!140;CL:0002087!5.85e-08!119;CL:0002031!8.01e-08!124;CL:0000763!4.04e-07!112;CL:0000049!4.04e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.34e-24;33!CL:0002057;8.34e-24;33!CL:0000473;7.36e-19;39!CL:0000234;7.36e-19;39!CL:0000576;3.98e-14;48!CL:0000766;4.68e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.02e-25,72;CL:0000860,1.21e-21,42;CL:0002057,1.21e-21,42;CL:0000473,8.80e-21,48;CL:0000234,8.80e-21,48;CL:0000839,1.72e-19,66;CL:0000557,5.82e-19,67;CL:0002194,1.08e-18,59;CL:0000576,1.08e-18,59;CL:0000040,1.08e-18,59;CL:0000559,1.08e-18,59;CL:0002009,1.33e-17,61;CL:0000738,4.48e-15,136;CL:0002087,8.41e-12,115;CL:0000763,1.85e-11,108;CL:0000049,1.85e-11,108;CL:0002031,3.11e-11,120;CL:0000988,8.91e-09,177;CL:0000037,1.77e-08,168;CL:0002032,4.22e-08,161;CL:0000837,4.22e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;5.95e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.49e-13!216;UBERON:0002371!2.12e-10!80;UBERON:0002193!4.97e-10!112;UBERON:0002390!1.00e-09!102;UBERON:0003061!1.00e-09!102;UBERON:0001474!2.44e-09!86;UBERON:0004765!6.29e-08!101;UBERON:0001434!6.29e-08!101;UBERON:0002405!3.12e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.95e-16,93;UBERON:0002371,8.80e-16,76;UBERON:0002193,4.37e-15,108;UBERON:0002390,8.18e-15,98;UBERON:0003061,8.18e-15,98;UBERON:0003081,2.17e-14,203;UBERON:0001474,1.64e-13,82;UBERON:0004765,5.07e-11,90;UBERON:0001434,1.85e-10,100;UBERON:0000926,9.95e-10,315;UBERON:0004120,9.95e-10,315;UBERON:0006603,9.95e-10,315;UBERON:0002204,1.42e-07,167 | |||
|phase1_expression=2.36181893051724,2.78330681058278,1.12763523276777,1.0007329835313,2.23480547213644,0,0,5.05375898741465,3.65659879479774,0,0.697801167972428,0,0.527533956456907,0.37129905888014,0,0,0,0,0.487932798790507,0,0,0.940364164434263,0.286235987131057,0,0,0.382067028739756,0.0821005894499457,0,0.393364276848904,1.15148819429164,3.8704030829019,0,1.204823675113,1.84877005083394,0,0.142169232487422,0,1.66198622559563,2.80762226458198,0.868043482863407,4.92614043327834,4.85840499028469,6.18181362322048,12.5042485350426,6.42389104270976,5.57943340731977,8.36744532860465,7.81218987241469,17.0338503992307,17.261543539329,4.09857130446561,5.91205574721463,42.7484644113407,10.3277549373412,32.502356782642,12.4239944098119,3.82068610080984,2.69668181334102,25.098879174414,2.88836124368484,8.31138263538754,7.25672860410775,4.3882004676759,2.55734850319616,9.57690487474327,5.6738522469114,3.11411124497787,31.1548344918362,5.73631210262222,11.7281976140763,2.42159801053347,2.20966581592539,0.632924774881769,0.422510572623884,0.425208599930087,0,0.561643155732475,0.750884464207532,1.6072558669708,0,1.39241674039363,0.547992461293902,1.75996244461323,0.546138611262131,0,0,0.800791974072025,0,0.661044872784862,0,1.70763890732835,3.52342313622563,1.52909291250092,0,2.24203425192614,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,1.00311897234407,0,0,1.94826728407911,1.44833593950726,0,0.664601683750863,1.08321545506006,4.48319619039863,1.56071217071854,3.12432018746985,0.829050053357545,1.15921234294021,0.296573126324121,0,0,1.24640276967323,0,0,0.506039384039006,0.95569624297229,0,0.950452044448374,0.903450714466637,1.02389288923535,0,1.18388626022008,0,2.82249440514625,0.802320587350522,1.30341963494519,0,0,0.255725123687061,2.53007406669196,1.50401373190767,0.869079113764942,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.523916301990851,0.364295288292542,0,0,0.348259474598534,0.664789802594326,0.476981248610684,0.571994910780128,0,0.993812036833525,0.860234595106124,1.04142150482278,1.69592382577203,1.67799774483962,0.825354125820202,1.8809546988313,0.258416759169329,0,1.00416183829401,2.41697590265488,1.52054421143703,2.68468263302986,1.10298924103761,0.81014194788176,0.892997282840798,0.22452937262617,0.225222960966644,0,3.79706263827252,0.916008719652036,2.63560834872127,7.75560528296651,0,0,1.01304409331664,0,0.573673241497627,1.06400514659507,0,2.1349799145941,2.96001058100592,0,0.404132016209064,0,0.454072282934794,0.576175924479999,0.234321431833797,2.49728061464256,0.570471821544449,0.896692083310806,0.23486899728753,0,0,0.204154171254893,0,1.13658359293342,1.18800285728205,3.4617370098998,0,1.43723628363248,0,0.375355559615893,0.277064115484183,0,0.612975591598039,4.5071417671979,0.226864366320042,0,0.427114777637135,0,0,0.103052529238439,0,1.30281799432113,0.168776332241266,0.0974370051611986,0,0.276149695926898,0.323292113637624,0.355009592516614,0.403008392910561,0.169560592310488,0.57978255948989,0.272746120590835,0.286804595389004,0,0.530119073285941,0.116193942869518,0.10366105501537,0.756962552626885,0,0,0,2.76269842704961,0.928735856063958,0,0.236613600079688,0.168584690078102,0.482022059766964,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0.769494313892781,8.11971000087113,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,1.09750285408626,0,0,0,0,1.03993478527958,0,0.231860809950154,0,1.01056513432752,0.462985512576611,1.14152491340759,0,0,0.738651018262192,0.234004265139238,0.891786973732369,0,0.16798212819886,0.283550194484773,0.268675568108545,0,0,1.47798971368783,3.52193736052904,2.07328115540772,0.864719720501769,3.28230326908588,0.63497894292169,28.6491319168708,45.7148044119183,11.9750712215894,1.02827492703324,0.901029173531752,2.5724378936752,0.112131084345361,0,0.07333828582095,0.258543431515556,7.15312891703765,0.845302752556,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0.791951872933429,1.80863626235752,0,1.29964888536674,1.2162378064119,1.00451418286425,4.21667878966063,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0.336255431980582,3.54655368363469,3.88129634747131,4.74869234235069,2.54094624222463,0,0,0,0,2.99602809578873,11.966458368161,9.53155680902882,0,0,0,0.831883446123229,0.356857977594324,0.946214490203608,0.585707074963566,8.12554469264841,6.82222512167955,3.10419213877515,0,0.184369168541703,1.21637060255316,1.17480694477644,1.37257369524342,3.10152039184331,2.37285620900479,2.34800627167578,0.909382714338778,4.99306318531491,1.5119514666484,3.2254015016441,0,0.280660094433074,1.28139149255701,1.02341449813341,1.28683136914886,0,0.154209693802656,1.24293207719189,0.821271560138091,0.519254429183621,0.813472649219715,0.966875596732978,1.40354529212299,3.68323955743585,0.34444334449382,0.364182336013434,4.06485686374215,2.70719767744447,0.308061348417659,0,1.46139224653261,0.422206515571503,1.13733384070897,0.850468526382578,0.215915916102139,7.71136263451447,0.812839312631559,3.51182841698397,0.254876273045038,2.49322802678617,0.223874754722178,0,0.261435451024901,0,0.328014645699706,1.30151357865721,0.824328093181778,0.0915694648183434,0.165018999841176,0,3.25030123018261,1.6068392984416,2.51343867559517,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0.170453254832202,0.534192213880424,1.15699440752685,2.11409074101617,0,2.8324178639554,1.39453664789186,0,0,1.23213432070436,1.06461206063404,1.73986598415015,5.00375391580584,0.429374660225974,0,0,0,0,1.71175595213568,3.18203247925937,0.78494864019923,0.179872457583315,0,0,1.81964233415984,0,0.421258456238981,0,0.243713489631284,0,1.22849920267187,1.41405431953713,2.26016233240486,1.10273068709225,1.32687795048244,1.75380354101505,0.578775534266688,0,0.811641507850816,0.92947049429925,0.563391205064483,0.143411352204052,0,1.78335525740625,0,1.26664581178598,2.63435914367922,0,0.349934720244983,0.962221127255121,1.34060455107157,0,1.50630081242847,1.29151611801369,0,0.886860307073351,0,0,0.764637207142375,1.70894156152249,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0,0.159426272728822,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0.540911356951966,0,0,0.37428108081644,1.31857361344705,0.242721043499027,0.111443384277478,0.568272293612826,0,0.890894042497916,0.307160702099232,0,0,1.78093928036649,0,0.211125408127993,0.597743964753209,1.65770349318689,0.251932747854276,0.613612095012929,0,0.933118762985422,0.718946809178615,0.716084698702437,0,0.986434056369336,4.7896618469388,0,3.87733098438087,0.0927680981618513,0,0.260427761085233,0.0874599999961957,5.79999660347835,0,0.254253650292766,0,0.344743373241465,0,0.520874984799877,0,0,0,0,0,0.438770794307945,0.21787692703798,0.41827123283581,1.15425387755696,0,1.1528195219403,2.78248697670294,0.108647371922008,0.31900115973192,1.55715908783166,1.06606955203727,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0,2.98578579323551,6.45740220874376,0.611030144933625,0,0.494255755786011,0,0.404406797884062,0.802577647298789,0.702793337176017,0.182454789215666,0.19566461893209,0.971121518136371,0,0,0.30607276163049,0.695052375913368,1.80388103297391,0.103688191397247,0,0,0,0,0.284609546029793,0.970722711091971,0,0.685946781900644,0.174118413160805,0.698906672968121,0.51595809741485,0,0,0.328461828212837,2.23074737923365,0.176512253383001,0.451961481561065,0.548167698587004,0.397429223405979,0.0633107959558787,0,0.240476460754601,4.90941887900511,0.39961921916426,0.432271251462318,0,0.343189995723929,0.432164393964449,0.621262677827163,0.235694034616795,0.135904206073614,0.209205692624666,0.305994652908965,0.866851769704557,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0.279282401272254,0.687481272035051,1.43574604915363,0.798716001995964,0.429226048136571,2.67805748930247,0.335917362433631,0.360299883542404,1.16495949527454,0.236349546921671,0,0.26961417541674,0.0984274815147488,0,0,0.136203406111576,0.803765742325096,0.550157746388935,0.83088067605837,0,0.77380195455795,0.0607495566580247,3.35434687599266,1.57611414598396,0.209818352539992,0.316801009558219,0.717149357331379,0,5.00286728461357,1.32418394073086,0,2.71499800876856,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0.226624183040251,1.31897010310274,0,0.517131825446202,0,0.342173675768659,0.704815022316672,2.0289608387862,0.78602152549833,9.5274982729855,7.93865634899121,0.197611631897944,0,0.638341257770182,0.544017803369474,2.2562090462043,0.919036730290385,0.983617892129413,2.66991963625398,0,0,0,0,0.443716206147409,0.124192805882767,0.138348634936231,0,1.66814029295813,5.42384133735438,0.235265819698172,0.468334905806882,0,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0,0,3.1304703708704,0,0.761610424337591,0,0.181848659202559,0.107410557042488,0,1.19428766609585,0.400027764663154,0.686791410365586,0,0,0.385239660814607,0,0,0,1.15761237161917,0.489473409012935,1.61179956973339,0.308801447160972,2.19284049578707,1.06013487567529,0.192914038270915,0.675769762612291,0.256241518587947,0.690860683462397,0.607719912354764,0.276516872303462,0.389720617678777,1.19578356282027,0.817826971279221,0,0,0.422624246717254,1.39991177098451,0.320075189082423,2.06657975592979,0.567515953566836,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0.619678821295011,0,0.636008701306837,0.157723490002507,0,0.705351887381368,0.6124909547064,0.128458450192919,1.41696576325585,0,0.82046545696302,0.252071696221718,0.207471757392654,0.161475645631851,1.42769420259154,2.84628383652974,0.353909170043221,0,0.346576998451015,1.90691047733584,0.690359926060101,0,0.601682626794058,0.20170506870352,0.781514011233092,1.04762677792569,0.163771917510097,0.739280431085226,0.0675375846183947,0,0,0.19024743058172,0,0,0.992422356778588,0.879356221798103,0.638812138197976,0,0,0,0.227662191351298,0.887023701626388,0.115233987555779,0.857440047187092,0.0679697329768317,0,0.118193840883968,0.111231401892069,1.33438257845874,0,0,0,0.215927591218621,0,0.214429632529969,0,0.116241425368125,0.173858272302579,0,1.03608082081518,1.87790324803345,2.07377898544228,0,0.473328002922261,0.170426809518315,2.11693525095465,0.4582137370881,0,0,0,0.785201868921944,0.365753774946808,1.29485767437579,3.59319823996865,0,0.485710993059139,0.467878926924211,0.198950775161368,0.118920090777569,0.22589216407792,0,0.603851374266694,4.55327532836874,1.09279780251979,0,0.245148321753905,0.471353094203252,0.588925401344836,0.297046400327086,0,0.169927114687817,2.91350145737546,1.09578409555081,0,0.71421575442263,0,0.160482733378337,0,0,0,0.315543124386369,0.203974470572744,0,2.1161073620616,0.371995018166751,0.462175628631418,0,0.252332849670158,0,1.14028650910293,0.509944148709909,0.534434810531121,0.0918948995348449,0,1.51557396436479,0,0.829169439458779,0.413731983447581,0.639701945702943,0.476128862927481,3.48780113114433,0.682821857254437,0.224263725161227,0.509177266225319,0.202117188958219,2.39488422686657,0.342233301085281,0.673520530145875,0.860666464712116,0.332660356546013,0.162806537221949,0.640364075266293,0,2.24563005266467,0,0.122241444182866,0.406896178315738,0.665756774185513,2.41528552309231,0 | |||
|short_description=p4@RNPEPL1 | |||
}} |
Revision as of 09:35, 21 January 2014
Short description: | p4@RNPEPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNPEPL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000270357, uc002vzi.2, uc010fzf.2_5end |
EntrezGene: | RNPEPL1 |
HGNC: | 10079 |
UniProt: | Q9HAU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.02e-25 | 72 |
classical monocyte | 1.21e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.21e-21 | 42 |
defensive cell | 8.80e-21 | 48 |
phagocyte | 8.80e-21 | 48 |
myeloid lineage restricted progenitor cell | 1.72e-19 | 66 |
granulocyte monocyte progenitor cell | 5.82e-19 | 67 |
monopoietic cell | 1.08e-18 | 59 |
monocyte | 1.08e-18 | 59 |
monoblast | 1.08e-18 | 59 |
promonocyte | 1.08e-18 | 59 |
macrophage dendritic cell progenitor | 1.33e-17 | 61 |
leukocyte | 4.48e-15 | 136 |
nongranular leukocyte | 8.41e-12 | 115 |
myeloid cell | 1.85e-11 | 108 |
common myeloid progenitor | 1.85e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 3.11e-11 | 120 |
hematopoietic cell | 8.91e-09 | 177 |
hematopoietic stem cell | 1.77e-08 | 168 |
hematopoietic oligopotent progenitor cell | 4.22e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.22e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
immune system | 7.95e-16 | 93 |
bone marrow | 8.80e-16 | 76 |
hemolymphoid system | 4.37e-15 | 108 |
hematopoietic system | 8.18e-15 | 98 |
blood island | 8.18e-15 | 98 |
lateral plate mesoderm | 2.17e-14 | 203 |
bone element | 1.64e-13 | 82 |
skeletal element | 5.07e-11 | 90 |
skeletal system | 1.85e-10 | 100 |
mesoderm | 9.95e-10 | 315 |
mesoderm-derived structure | 9.95e-10 | 315 |
presumptive mesoderm | 9.95e-10 | 315 |
musculoskeletal system | 1.42e-07 | 167 |