FFCP PHASE1:Mm9::chr10:76548087..76548106,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=111|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:76548087..76548106,-|id=chr10:76548087..76548106,-|ontology_enrichment_celltype=CL:0000107!5.64e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,3.70e-12,9;CL:0000182,1.38e-10,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!4.51e-11!49;UBERON:0005173!4.51e-11!49;UBERON:0002417!4.51e-11!49;UBERON:0000916!4.51e-11!49;UBERON:0002365!1.14e-09!25;UBERON:0002330!1.14e-09!25;UBERON:0002107!1.43e-09!22;UBERON:0007499!1.43e-09!22;UBERON:0006925!1.43e-09!22;UBERON:0009497!1.43e-09!22;UBERON:0000015!1.43e-09!22;UBERON:0002423!1.43e-09!22;UBERON:0006235!1.43e-09!22;UBERON:0008835!1.43e-09!22;UBERON:0003894!1.43e-09!22;UBERON:0004161!1.43e-09!22;UBERON:0008836!1.43e-09!22;UBERON:0009569!6.21e-09!66;UBERON:0009854!7.99e-09!23;UBERON:0009856!7.99e-09!23;UBERON:0000010!4.70e-08!11;UBERON:0005256!5.58e-08!47;UBERON:0002410!5.64e-08!9;UBERON:0000466!7.81e-08!79;UBERON:0005177!9.09e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.87e-19,22;UBERON:0007499,2.87e-19,22;UBERON:0006925,2.87e-19,22;UBERON:0009497,2.87e-19,22;UBERON:0000015,2.87e-19,22;UBERON:0002423,2.87e-19,22;UBERON:0006235,2.87e-19,22;UBERON:0008835,2.87e-19,22;UBERON:0003894,2.87e-19,22;UBERON:0004161,2.87e-19,22;UBERON:0008836,2.87e-19,22;UBERON:0009854,2.52e-18,23;UBERON:0009856,2.52e-18,23;UBERON:0002365,1.16e-16,25;UBERON:0002330,1.16e-16,25;UBERON:0002410,3.70e-12,9;UBERON:0000013,2.32e-10,3;UBERON:0000010,7.75e-10,11;UBERON:0000011,8.33e-10,3;UBERON:0003914,4.09e-09,47;UBERON:0005256,3.47e-08,45;UBERON:0005172,2.51e-07,49;UBERON:0005173,2.51e-07,49;UBERON:0002417,2.51e-07,49;UBERON:0000916,2.51e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0.372798891650601,0.075726193333184,0.377857800533928,0,0,4.0798280022465,1.61910957491345,1.94932925234301,1.34408066129201,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,1.02765491747154,0,0.445326417194474,0.173485326766136,0.608930956624282,0.691846491768175,0,0.470354828542819,0,0.988779870937496,0.144599356919912,0,0,0,0,0,0,1.46612694769419,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0.252722758433675,0.210441855886474,0.520481771850815,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.646703978798527,0,0.175951124163949,0.876782929710299,0,0,0,1.19420560091096,0,0,0,0.207125772535502,1.17263029990548,0,0,0,0.154267112887378,0,0,0.467061369468678,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0,0.596869416123452,0,0.898819408654221,0.216138049874694,0,0,0.228497025219458,0,0,0,0.911765658574141,0.252946148497029,0.295220295959204,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0.449724224769707,0.405720242777006,0.482354319504834,0.25462585178142,1.43848068725405,14.2678999562031,1.09824565275233,10.0637744569148,5.20997326735905,1.87222603868736,2.27320990152401,0.538192240565737,8.20153986317724,0.184753190166605,0,0.325929952884052,0,0.234690248288502,0,0,0.780534591431195,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0.94652465824877,0.780877488593277,0.646270193198397,1.19484398976276,1.78238939265915,1.41538265394416,1.21443210502468,2.63030272120181,2.76701444562566,0,0,0.35613120733451,1.30309567482861,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0,0.727067458955011,0,0,0,0,0,0.18006109403131,2.06973894052407,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.330613822901344,0.26175594198403,0.259229946583586,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.387479470433193,0,0.469428954583016,0.13020438484395,1.36317147753424,0,0,0,0.608175645870493,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,0.341467211508268,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,1.07435527024149,0.382576664137687,0.220591419119515,0|short_description=p@chr10:76548087..76548106,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=111 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:76548087..76548106,- | |||
|description=CAGE_peak_at_chr10:76548087..76548106,- | |||
|id=chr10:76548087..76548106,- | |||
|ontology_enrichment_celltype=CL:0000107!5.64e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.70e-12,9;CL:0000182,1.38e-10,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!4.51e-11!49;UBERON:0005173!4.51e-11!49;UBERON:0002417!4.51e-11!49;UBERON:0000916!4.51e-11!49;UBERON:0002365!1.14e-09!25;UBERON:0002330!1.14e-09!25;UBERON:0002107!1.43e-09!22;UBERON:0007499!1.43e-09!22;UBERON:0006925!1.43e-09!22;UBERON:0009497!1.43e-09!22;UBERON:0000015!1.43e-09!22;UBERON:0002423!1.43e-09!22;UBERON:0006235!1.43e-09!22;UBERON:0008835!1.43e-09!22;UBERON:0003894!1.43e-09!22;UBERON:0004161!1.43e-09!22;UBERON:0008836!1.43e-09!22;UBERON:0009569!6.21e-09!66;UBERON:0009854!7.99e-09!23;UBERON:0009856!7.99e-09!23;UBERON:0000010!4.70e-08!11;UBERON:0005256!5.58e-08!47;UBERON:0002410!5.64e-08!9;UBERON:0000466!7.81e-08!79;UBERON:0005177!9.09e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.87e-19,22;UBERON:0007499,2.87e-19,22;UBERON:0006925,2.87e-19,22;UBERON:0009497,2.87e-19,22;UBERON:0000015,2.87e-19,22;UBERON:0002423,2.87e-19,22;UBERON:0006235,2.87e-19,22;UBERON:0008835,2.87e-19,22;UBERON:0003894,2.87e-19,22;UBERON:0004161,2.87e-19,22;UBERON:0008836,2.87e-19,22;UBERON:0009854,2.52e-18,23;UBERON:0009856,2.52e-18,23;UBERON:0002365,1.16e-16,25;UBERON:0002330,1.16e-16,25;UBERON:0002410,3.70e-12,9;UBERON:0000013,2.32e-10,3;UBERON:0000010,7.75e-10,11;UBERON:0000011,8.33e-10,3;UBERON:0003914,4.09e-09,47;UBERON:0005256,3.47e-08,45;UBERON:0005172,2.51e-07,49;UBERON:0005173,2.51e-07,49;UBERON:0002417,2.51e-07,49;UBERON:0000916,2.51e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0.372798891650601,0.075726193333184,0.377857800533928,0,0,4.0798280022465,1.61910957491345,1.94932925234301,1.34408066129201,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,1.02765491747154,0,0.445326417194474,0.173485326766136,0.608930956624282,0.691846491768175,0,0.470354828542819,0,0.988779870937496,0.144599356919912,0,0,0,0,0,0,1.46612694769419,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0.252722758433675,0.210441855886474,0.520481771850815,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.646703978798527,0,0.175951124163949,0.876782929710299,0,0,0,1.19420560091096,0,0,0,0.207125772535502,1.17263029990548,0,0,0,0.154267112887378,0,0,0.467061369468678,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0,0.596869416123452,0,0.898819408654221,0.216138049874694,0,0,0.228497025219458,0,0,0,0.911765658574141,0.252946148497029,0.295220295959204,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0.449724224769707,0.405720242777006,0.482354319504834,0.25462585178142,1.43848068725405,14.2678999562031,1.09824565275233,10.0637744569148,5.20997326735905,1.87222603868736,2.27320990152401,0.538192240565737,8.20153986317724,0.184753190166605,0,0.325929952884052,0,0.234690248288502,0,0,0.780534591431195,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0.94652465824877,0.780877488593277,0.646270193198397,1.19484398976276,1.78238939265915,1.41538265394416,1.21443210502468,2.63030272120181,2.76701444562566,0,0,0.35613120733451,1.30309567482861,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0,0.727067458955011,0,0,0,0,0,0.18006109403131,2.06973894052407,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.0603129249281559,0,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.330613822901344,0.26175594198403,0.259229946583586,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.387479470433193,0,0.469428954583016,0.13020438484395,1.36317147753424,0,0,0,0.608175645870493,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,0.341467211508268,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,1.07435527024149,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr10:76548087..76548106,- | |||
}} |
Latest revision as of 17:35, 4 August 2015
Short description: | p@chr10:76548087..76548106, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:76548087..76548106, - |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.70e-12 | 9 |
hepatocyte | 1.38e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.87e-19 | 22 |
epithelial sac | 2.87e-19 | 22 |
digestive gland | 2.87e-19 | 22 |
epithelium of foregut-midgut junction | 2.87e-19 | 22 |
anatomical boundary | 2.87e-19 | 22 |
hepatobiliary system | 2.87e-19 | 22 |
foregut-midgut junction | 2.87e-19 | 22 |
hepatic diverticulum | 2.87e-19 | 22 |
liver primordium | 2.87e-19 | 22 |
septum transversum | 2.87e-19 | 22 |
liver bud | 2.87e-19 | 22 |
digestive tract diverticulum | 2.52e-18 | 23 |
sac | 2.52e-18 | 23 |
exocrine gland | 1.16e-16 | 25 |
exocrine system | 1.16e-16 | 25 |
autonomic nervous system | 3.70e-12 | 9 |
sympathetic nervous system | 2.32e-10 | 3 |
peripheral nervous system | 7.75e-10 | 11 |
parasympathetic nervous system | 8.33e-10 | 3 |
epithelial tube | 4.09e-09 | 47 |
trunk mesenchyme | 3.47e-08 | 45 |
abdomen element | 2.51e-07 | 49 |
abdominal segment element | 2.51e-07 | 49 |
abdominal segment of trunk | 2.51e-07 | 49 |
abdomen | 2.51e-07 | 49 |