FFCP PHASE1:Hg19::chr2:231191875..231191918,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93349 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25105 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H930 | |||
|association_with_transcript=0bp_to_ENST00000415673,ENST00000444636,NM_138402,uc010fxm.1_5end | |||
|coexpression_cluster_id=C2578 | |||
|description=CAGE_peak_1_at_SP140L_5end | |||
|id=chr2:231191875..231191918,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.79e-41!140;CL:0000037!2.09e-36!172;CL:0000566!2.09e-36!172;CL:0002087!6.91e-36!119;CL:0002031!9.81e-35!124;CL:0002032!4.97e-34!165;CL:0000837!4.97e-34!165;CL:0000988!2.11e-33!182;CL:0000134!1.30e-22!358;CL:0000766!3.68e-22!76;CL:0002320!7.14e-22!365;CL:0000557!1.23e-18!71;CL:0000839!1.71e-18!70;CL:0000048!1.95e-18!430;CL:0002057!1.99e-17!42;CL:0002194!2.01e-17!63;CL:0000576!2.01e-17!63;CL:0000040!2.01e-17!63;CL:0000559!2.01e-17!63;CL:0000763!2.40e-17!112;CL:0000049!2.40e-17!112;CL:0002009!1.07e-16!65;CL:0000723!1.29e-16!436;CL:0000838!1.54e-16!52;CL:0000542!2.39e-16!53;CL:0000051!2.39e-16!53;CL:0000034!1.13e-15!444;CL:0000219!2.41e-15!390;CL:0000860!3.61e-15!45;CL:0000791!3.32e-11!18;CL:0000789!3.32e-11!18;CL:0002420!3.32e-11!18;CL:0002419!3.32e-11!18;CL:0000790!3.32e-11!18;CL:0000084!3.14e-10!25;CL:0000827!3.14e-10!25;CL:0000236!5.96e-08!14;CL:0000625!8.95e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.78e-12;33!CL:0002057;1.78e-12;33!CL:0002087;3.56e-12;104!CL:0000576;9.90e-12;48!CL:0000473;1.82e-11;39!CL:0000234;1.82e-11;39!CL:0000791;3.12e-11;18!CL:0000789;3.12e-11;18!CL:0002419;3.12e-11;18!CL:0000766;7.14e-11;69!CL:0000084;3.08e-10;25!CL:0000542;5.26e-10;53!CL:0000738;2.49e-09;136!CL:0000236;4.10e-08;13!CL:0000625;8.36e-08;11!CL:0000988;2.75e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.06e-42,136;CL:0000037,1.19e-37,168;CL:0002087,1.23e-37,115;CL:0002031,2.24e-36,120;CL:0002032,2.97e-35,161;CL:0000837,2.97e-35,161;CL:0000988,7.84e-35,177;CL:0000766,6.81e-24,72;CL:0000134,1.25e-23,354;CL:0002320,7.34e-23,361;CL:0000557,3.21e-20,67;CL:0000839,4.36e-20,66;CL:0000048,1.34e-19,427;CL:0002194,4.40e-19,59;CL:0000576,4.40e-19,59;CL:0000040,4.40e-19,59;CL:0000559,4.40e-19,59;CL:0000473,1.23e-18,48;CL:0000234,1.23e-18,48;CL:0000763,2.46e-18,108;CL:0000049,2.46e-18,108;CL:0002009,2.97e-18,61;CL:0000723,9.63e-18,433;CL:0000860,1.95e-17,42;CL:0002057,1.95e-17,42;CL:0000034,9.71e-17,441;CL:0000838,1.51e-16,52;CL:0000542,2.34e-16,53;CL:0000051,2.34e-16,53;CL:0000219,3.55e-16,386;CL:0000791,3.28e-11,18;CL:0000789,3.28e-11,18;CL:0002420,3.28e-11,18;CL:0002419,3.28e-11,18;CL:0000790,3.28e-11,18;CL:0000084,3.11e-10,25;CL:0000827,3.11e-10,25;CL:0000236,5.91e-08,14;CL:0000625,8.88e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-12;42!CL:0000790;3.12e-11;18!CL:0000051;5.26e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.20e-25!112;UBERON:0002390!1.60e-24!102;UBERON:0003061!1.60e-24!102;UBERON:0002384!5.67e-22!375;UBERON:0002371!2.47e-17!80;UBERON:0001474!2.79e-16!86;UBERON:0002405!3.30e-16!115;UBERON:0004765!3.69e-13!101;UBERON:0001434!3.69e-13!101;UBERON:0003081!2.27e-10!216;UBERON:0002204!5.95e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.03e-26,108;UBERON:0002390,5.55e-26,98;UBERON:0003061,5.55e-26,98;UBERON:0002384,6.77e-23,371;UBERON:0002405,2.22e-21,93;UBERON:0002371,1.12e-18,76;UBERON:0001474,1.66e-17,82;UBERON:0004765,3.20e-16,90;UBERON:0001434,5.46e-14,100;UBERON:0003081,1.83e-12,203;UBERON:0002204,1.35e-08,167;UBERON:0000926,3.15e-07,315;UBERON:0004120,3.15e-07,315;UBERON:0006603,3.15e-07,315 | |||
|phase1_expression=5.63202975738726,6.42301571672949,5.77913056793482,8.00586386825043,9.83314407740033,8.72338524100369,7.59899634504932,8.2123583545488,11.7533532689927,2.94880723801811,1.39560233594486,3.27662058195258,2.37390280405608,7.4259811776028,5.63375538737457,8.74022690387308,9.64311244838363,14.6062018077475,7.3189919818576,4.062994916534,3.26401105990805,1.88072832886853,3.14859585844162,2.32686522623903,2.76193807108566,13.5251728173874,11.0835795757427,12.2001711036203,17.7013924582007,29.1710342553882,17.9586703046648,2.75826367343678,2.409647350226,3.69754010166788,4.41563043307719,3.41206157969812,14.6800219667424,17.7278530730201,18.8511780621933,19.9650001058584,23.0632938467122,22.0247692892906,27.8181613044921,20.0649569515799,17.760169353374,24.5009901799694,6.97287110717054,13.5685403047203,9.91060386864331,24.7415457397049,30.9954454900212,34.2899233338449,12.0660988257816,10.3277549373412,13.5426486594342,13.3652061075249,11.1891521523717,13.9328560355952,26.3232147438976,20.8603867599461,31.327519164153,39.2523047222192,44.8793229648672,48.5896215607271,26.9894591924583,18.1563271901165,23.0444232128363,33.1648238138901,35.9823213709939,31.2751936375368,46.6157617027694,17.6773265274031,40.5071855924332,19.2242310543867,24.236890196015,18.6596194502455,19.7698390817831,18.4717578195053,20.7336006839233,16.5307391369924,25.6602513586826,24.2943324506963,59.8387231168497,57.8906927937859,55.1495737395404,59.3155009367445,68.8681097701941,54.0267293557214,38.340602621522,50.5648489903743,53.5060190962881,34.0597569835145,44.7259676906518,21.1474125726441,24.101868208206,14.2227405778542,51.7346695399381,35.3709686474248,27.9618038639333,43.635675296967,35.5255270630614,34.5616898186355,19.4826728407911,29.1895397039155,17.9709603559651,25.9194656662837,34.662894561922,24.849716026781,23.8008606034577,39.4650971048823,29.5694519030858,53.0339646895146,48.6379927171558,48.6924307123278,39.7234990458912,45.3237370790265,32.1905214625614,31.9573524298846,47.820721791686,31.5379760180856,30.6009223312517,27.5631092890028,41.5587328654653,44.4113540705832,33.7312961691334,35.2798105545585,30.3817358860787,32.2570789159572,26.2091391867837,32.440666469747,14.6284119788377,0.670700859703636,7.67175371061182,8.31310050484502,5.0133791063589,5.64901423947212,12.7245751528176,6.8128881842369,7.27918092163323,5.98669373148923,5.88493064143945,6.35248516163906,1.09288586487763,3.33705998505986,13.6309905334967,11.1443031871531,11.3014266441035,5.48528435902286,10.2959083940423,8.91498003190956,6.75792185046797,6.02164216574287,5.20710752411391,6.21838736116411,10.9069853414576,6.60283300656162,7.31482382878837,10.8535038851118,15.2979492955285,9.37217715741077,7.25092770796465,5.32190474002959,8.05404789908959,6.25027236587977,5.67099363517232,13.2163597860438,13.9208211028225,9.68458732156571,4.5994991239765,1.89853131913626,3.66403487860815,25.038279312852,31.022421131866,0.872188104285069,7.9515512271251,10.6369629798247,37.4717981701409,16.0628507619336,9.57604631935564,5.60677600142307,8.5399196583764,12.8267125176923,9.95875313279252,8.62148301246004,8.3365570587864,6.35701196108712,3.45705554687999,3.74914290934075,8.11616199758833,6.27519003698894,5.82849854152024,5.40198693761318,4.69431538667581,4.6348766211742,14.2907919878425,7.73856199064138,12.8123968657949,9.50402285825643,9.89067717114228,4.55080680969013,3.59309070908119,8.08013346979518,6.13080747372624,13.0220134277566,7.90159717585508,6.43624371177941,8.56356935767602,6.80593098960126,14.1717812194201,7.47450860864986,8.47727604638247,14.4043726120513,13.4998813302355,18.2924783432397,10.0503102419058,21.6033705268821,11.6924406193438,25.4958111986556,9.11293996558764,14.3864990568743,11.7153165530483,8.56392834934942,6.10418132317755,5.60456474173561,6.81865301477087,8.03052867089211,0.121973706129595,0,0.232387885739037,0.725627385107593,0,0,3.12899064659632,7.07565032012174,1.38134921352481,8.8229906326076,8.66255378003503,6.98010120235079,4.72037132218685,4.82022059766964,4.85293480022533,6.75426276686459,6.40630671599961,7.9550471814497,6.67152981426177,6.92544882503503,8.11971000087113,0,4.115740113314,1.47008711385542,8.87285243752816,4.91413608338813,17.1329072937607,12.8024298830249,4.18160691046586,8.57839051492628,1.31700342490351,3.37205259772859,4.2222168412885,5.09236448371913,5.86454949558584,1.03993478527958,4.3299402607582,1.62302566965108,9.62751292733738,8.37325397014228,9.25971025153221,14.0788072653603,0,0.858486162094873,18.9587094687296,12.1682217872404,14.5658539042954,7.49870671894216,8.06314215354526,8.08118054281603,4.20925056703387,4.65014301622339,2.68367875415648,45.3250178864268,14.792136914222,14.0983118567725,10.8089965062721,13.634182810049,3.23839260890062,4.96584953225761,2.34434894420094,6.84289784090821,2.46785982487976,10.2116639666932,8.86061941154792,7.40065156679381,11.3349617896653,7.40716686791595,5.68795549334222,3.57656445851882,3.381211010224,11.7012771297343,14.5610411675913,4.8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| |||
|short_description=p1@SP140L | |||
}} |
Revision as of 09:06, 21 January 2014
Short description: | p1@SP140L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SP140L_5end |
Coexpression cluster: | C2578_Eosinophils_CD14_CD19_Neutrophils_CD4_Whole_CD14CD16 |
Association with transcript: | 0bp_to_ENST00000415673, ENST00000444636, NM_138402, uc010fxm.1_5end |
EntrezGene: | SP140L |
HGNC: | 25105 |
UniProt: | Q9H930 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.03e-26 | 108 |
hematopoietic system | 5.55e-26 | 98 |
blood island | 5.55e-26 | 98 |
connective tissue | 6.77e-23 | 371 |
immune system | 2.22e-21 | 93 |
bone marrow | 1.12e-18 | 76 |
bone element | 1.66e-17 | 82 |
skeletal element | 3.20e-16 | 90 |
skeletal system | 5.46e-14 | 100 |
lateral plate mesoderm | 1.83e-12 | 203 |
musculoskeletal system | 1.35e-08 | 167 |
mesoderm | 3.15e-07 | 315 |
mesoderm-derived structure | 3.15e-07 | 315 |
presumptive mesoderm | 3.15e-07 | 315 |