FFCP PHASE1:Hg19::chr2:228682869..228682884,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4196 | |||
|description=CAGE_peak_at_chr2:228682869..228682884,- | |||
|id=chr2:228682869..228682884,- | |||
|ontology_enrichment_celltype=CL:0000548!3.66e-14!679;CL:0000004!3.66e-14!679;CL:0000255!3.66e-14!679;CL:0000012!8.16e-14!682;CL:0002371!2.10e-10!591;CL:0000003!1.69e-09!722;CL:0002494!1.72e-09!16;CL:0000144!3.87e-09!625;CL:0000063!5.54e-08!578;CL:0000057!3.65e-07!75;CL:0000860!6.23e-07!45;CL:0002057!8.59e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002548;3.30e-09;6!CL:0002195;1.53e-07;2!CL:0002571;1.53e-07;2!CL:0002494;4.47e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,2.21e-09,6;CL:0002195,1.70e-07,2;CL:0002571,1.70e-07,2;CL:0002494,3.95e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.92e-11!448;UBERON:0004120!8.92e-11!448;UBERON:0006603!8.92e-11!448;UBERON:0000923!3.09e-09!604;UBERON:0005291!3.09e-09!604;UBERON:0006598!3.09e-09!604;UBERON:0002532!3.09e-09!604;UBERON:0002050!3.87e-09!605;UBERON:0005423!3.87e-09!605;UBERON:0000922!1.82e-08!612;UBERON:0002100!7.38e-08!216;UBERON:0000914!1.68e-07!83;UBERON:0002329!1.68e-07!83;UBERON:0003077!1.68e-07!83;UBERON:0003059!1.68e-07!83;UBERON:0007282!1.68e-07!83;UBERON:0009618!1.68e-07!83;UBERON:0007285!1.68e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.47e-07;16!UBERON:0002036;4.47e-07;16 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,1.47440361900905,0,0.218441372130172,0.527533956456907,1.36142988256051,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0.309632246632152,0.919421224478927,0,0.369754010166788,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,1.35426486594342,0.752969358170419,0,0.224723484445085,1.22433556948361,0.641858054152187,0,0,0,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0,0.209658645508376,0.786300418025466,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0,0,0.144846518960824,0,0,0,0.443458794925128,0.263504357079378,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,12.4464629964426,4.01571269048339,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,2.17847724779836,1.75123873690594,1.63461903113459,1.05950199351452,0,0.937285727335186,0.936480230490962,0.570471821544449,0.597794722207204,1.17434498643765,0.647491777472526,0.702254033511242,2.65400422631361,0.122834317311768,2.27316718586684,0,0,2.73048408581408,0,0.673344455816265,0.625592599359821,3.87889761677856,0,0,0.300476117813194,0.226864366320042,0,0,0,0,0,0.772921620136887,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.219500570817251,1.1240175325762,0.100528972411631,0.370353780634118,0.977424915930974,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0.141775097242386,1.79117045405697,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.672786506072164,0,0.66004457238855,0.129271715757778,0,0,0,0,0.257207374262142,0,0,1.42977993658148,0.542621605391443,0,0,1.06617584622764,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,1.02738161275192,1.07436577943937,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.542530047399471,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0.413536052245775,1.72571360654893,0.213455115606889,0,1.66435439510497,0.907170879989041,0.496215615637554,0,0,0.256278298511402,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0,0,0,0,0,1.01289087829486,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,0,1.23238893691716,2.14905144616581,1.10269257987624,2.90034661144339,0,0.852266274161009,0,1.65284915360978,0.768760269460425,1.65896526242959,0.50578890427775,0,6.2962469366128,0,0.308033580176089,0.532306030317022,0,0,2.57624796135584,0.372158369359667,0.632758849437452,0,0.255897791311334,0.42793898803392,0.636406495851874,0,0.179872457583315,0.823611089208164,1.29593642580255,0.202182481573316,0,0.842516912477962,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0.430234056612155,0.196498082026242,0,0,0,0,0.379473173765715,1.39973888097993,1.05844323998063,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0.667852230137435,0.16480387422676,0,0,0,0,0,0,0,0,0.716084698702437,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,3.32326936353593,3.97190347050599,3.13932918407225,1.19472429772959,0.569219092059585,0,0,0,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0.240476460754601,0,0,0.144090417154106,0,0,4.03353434366819,0.248505071130865,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,2.51002275065983,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,0,0.106787412567695,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,2.28372266835974,0,0,0,0,0.233713309847224,1.10961172300523,0,0,6.22867855117575,1.14420034198462,2.11723293268535,0.310874401165561,0.295710299979268,0.477890301491107,1.34940933649081,0.155262956876259,0.829412415681711,0.265841714557995,0.521745061811734,0,0,0,0.363697318405119,0.107410557042488,0.928067519756987,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,1.23682402162117,0.38582807654183,0,0,0,0,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827356886187777,0.111231401892069,0,0,0,0,0.863710364874486,0,0,0,0,0,0,2.48659396995644,0.51215543128185,2.07377898544228,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.244209805832924,1.06727345877715,0,0.808426818959282,0,0,0,0,0,0 | |||
|short_description=p@chr2:228682869..228682884,- | |||
}} |
Revision as of 09:02, 21 January 2014
Short description: | p@chr2:228682869..228682884, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:228682869..228682884, - |
Coexpression cluster: | C4196_Fibroblast_Smooth_mesenchymal_giant_embryonic_Skeletal_Placental |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 2.21e-09 | 6 |
hepatic stem cell | 1.70e-07 | 2 |
hepatic mesenchymal stem cell | 1.70e-07 | 2 |
cardiocyte | 3.95e-07 | 16 |