FFCP PHASE1:Mm9::chr10:66559145..66559154,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=108829|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000173295_5end|description=CAGE_peak_16_at_Jmjd1c_5end|id=chr10:66559145..66559154,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,4.10e-08,1;CL:0002078,4.10e-08,1;CL:0000115,4.10e-08,1;CL:0002262,4.10e-08,1;CL:1000398,4.10e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.10e-08,1;UBERON:0001281,4.10e-08,1;UBERON:0000353,4.10e-08,1;UBERON:0003497,4.10e-08,1;UBERON:0003909,4.10e-08,1;UBERON:0003928,4.10e-08,1;UBERON:0003835,4.10e-08,1;UBERON:0003513,4.10e-08,1;UBERON:0001280,4.10e-08,1;UBERON:0004647,4.10e-08,1;UBERON:0002294,4.10e-08,1;UBERON:0001173,4.10e-08,1;UBERON:0004912,4.10e-08,1;UBERON:0005171,4.10e-08,1|phase1_expression=0.480446541314382,0.697950815278722,2.27499619694768,1.81478526784098,0,0.839396359559449,0.233612640595526,0.903863264091034,0.281577444303333,0.234064526321993,0,0.0797721589953364,0.513602189793617,0,0.333109761815663,0,0,0.315462165358238,0.548457734422955,0.84877930359606,0.255129870453209,0.297872853602656,0.261199789138935,0,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0.837063261473815,1.5626706890476,0.523523743973798,3.52938892818609,0,1.94204141212461,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,0.263772575460388,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.227178579999552,0.151143120213571,1.73918693221007,0.860423876981386,4.75979933595425,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0.494389935468748,0.144599356919912,0,0.485300549842228,0,0,0,0.292780797011547,1.67557365450764,0.255457055208591,1.07833612055328,0.599902730993408,0.254140454146129,0,0,0.376963056338593,0.347648640384553,0.511430914660661,0.20778804455956,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.150704817835715,0.340182495756639,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0,0,0,0.710234206755631,0,0,0,0.268273401399619,0.583826711835847,0,0,0.162137619091711,0.438599962275997,0.219550115291051,0,0.210289948564127,0.205809224758569,1.32167513193519,0.264450566663544,0.426576501070468,0,0.257734922644187,0.605050573870028,0,0.760902504450237,0.949058123089023,0.164698954724011,0.251335208800269,0,0,0,0.432276099749388,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.280543279561274,0.252946148497029,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0,0.472905432318573,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0,0,0,0,0.646270193198397,0,0.668396022247182,0.849229592366497,0.404810701674894,0,0,0.321321316421807,0.425820255624806,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0,0.329098041204242,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0,0.241251699712623,0.119372344003136,0,0,0,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0.228778173206523,1.35982743995084,1.81936888020755,1.38199973804424,0,0.632671987162271,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.645799117388655,0,0.234714477291508,0,0.524296722128554,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0.605798699688886,0.228620419965,0,0.194915761479505,0.288635524920988,0,0,0.443971906748129,0.62799699626633,0.335769232728157,0,0.375364950902364,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.0640251524048693,0.17230640686684,0.952587382566147,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0,0.467863216890817,0,0.382576664137687,0.220591419119515,0|short_description=p16@Jmjd1c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108829 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000173295_5end | |||
|cluster_id=chr10:66559145..66559154,+ | |||
|description=CAGE_peak_16_at_Jmjd1c_5end | |||
|id=chr10:66559145..66559154,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,4.10e-08,1;CL:0002078,4.10e-08,1;CL:0000115,4.10e-08,1;CL:0002262,4.10e-08,1;CL:1000398,4.10e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.10e-08,1;UBERON:0001281,4.10e-08,1;UBERON:0000353,4.10e-08,1;UBERON:0003497,4.10e-08,1;UBERON:0003909,4.10e-08,1;UBERON:0003928,4.10e-08,1;UBERON:0003835,4.10e-08,1;UBERON:0003513,4.10e-08,1;UBERON:0001280,4.10e-08,1;UBERON:0004647,4.10e-08,1;UBERON:0002294,4.10e-08,1;UBERON:0001173,4.10e-08,1;UBERON:0004912,4.10e-08,1;UBERON:0005171,4.10e-08,1 | |||
|phase1_expression=0.480446541314382,0.697950815278722,2.27499619694768,1.81478526784098,0,0.839396359559449,0.233612640595526,0.903863264091034,0.281577444303333,0.234064526321993,0,0.0797721589953364,0.513602189793617,0,0.333109761815663,0,0,0.315462165358238,0.548457734422955,0.84877930359606,0.255129870453209,0.297872853602656,0.261199789138935,0,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0.837063261473815,1.5626706890476,0.523523743973798,3.52938892818609,0,1.94204141212461,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,0.263772575460388,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.227178579999552,0.151143120213571,1.73918693221007,0.860423876981386,4.75979933595425,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0.494389935468748,0.144599356919912,0,0.485300549842228,0,0,0,0.292780797011547,1.67557365450764,0.255457055208591,1.07833612055328,0.599902730993408,0.254140454146129,0,0,0.376963056338593,0.347648640384553,0.511430914660661,0.20778804455956,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.150704817835715,0.340182495756639,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0,0,0,0.710234206755631,0,0,0,0.268273401399619,0.583826711835847,0,0,0.162137619091711,0.438599962275997,0.219550115291051,0,0.210289948564127,0.205809224758569,1.32167513193519,0.264450566663544,0.426576501070468,0,0.257734922644187,0.605050573870028,0,0.760902504450237,0.949058123089023,0.164698954724011,0.251335208800269,0,0,0,0.432276099749388,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.280543279561274,0.252946148497029,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0.335012514883631,0.238043640886014,0,0.472905432318573,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0,0,0,0,0.646270193198397,0,0.668396022247182,0.849229592366497,0.404810701674894,0,0,0.321321316421807,0.425820255624806,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0,0.329098041204242,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0,0.241251699712623,0.119372344003136,0,0,0,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0.228778173206523,1.35982743995084,1.81936888020755,1.38199973804424,0,0.632671987162271,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.645799117388655,0,0.234714477291508,0,0.524296722128554,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0.605798699688886,0.228620419965,0,0.194915761479505,0.288635524920988,0,0,0.443971906748129,0.62799699626633,0.335769232728157,0,0.375364950902364,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.0640251524048693,0.17230640686684,0.952587382566147,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0,0.467863216890817,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p16@Jmjd1c | |||
}} |
Revision as of 14:44, 4 August 2015
Short description: | p16@Jmjd1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Jmjd1c_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000173295_5end |
EntrezGene: | 108829 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 4.10e-08 | 1 |
meso-epithelial cell | 4.10e-08 | 1 |
endothelial cell | 4.10e-08 | 1 |
endothelial cell of sinusoid | 4.10e-08 | 1 |
endothelial cell of hepatic sinusoid | 4.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.10e-08 | 1 |
hepatic sinusoid | 4.10e-08 | 1 |
parenchyma | 4.10e-08 | 1 |
abdomen blood vessel | 4.10e-08 | 1 |
sinusoid | 4.10e-08 | 1 |
digestive system duct | 4.10e-08 | 1 |
abdominal segment blood vessel | 4.10e-08 | 1 |
trunk blood vessel | 4.10e-08 | 1 |
liver parenchyma | 4.10e-08 | 1 |
liver lobule | 4.10e-08 | 1 |
biliary system | 4.10e-08 | 1 |
biliary tree | 4.10e-08 | 1 |
biliary bud | 4.10e-08 | 1 |
hepatic duct | 4.10e-08 | 1 |