FFCP PHASE1:Mm9::chr10:13044027..13044048,-: Difference between revisions
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{{FFCP|EntrezGene=215789|HGNC=|MCL_coexpression_id=2537|UniProt=A3KGD2|association_with_transcript=46bp_to_ENSMUST00000105543_5end|description=CAGE_peak_3_at_Phactr2_5end|id=chr10:13044027..13044048,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.77e-09!23;UBERON:0001009!1.77e-09!23;UBERON:0007100!8.01e-09!18;UBERON:0000948!8.01e-09!18;UBERON:0005498!8.01e-09!18;UBERON:0004140!8.01e-09!18;UBERON:0009881!8.01e-09!18;UBERON:0004141!8.01e-09!18;UBERON:0003084!8.01e-09!18;UBERON:0007005!8.01e-09!18;UBERON:0004139!8.01e-09!18;UBERON:0004291!8.01e-09!18;UBERON:0002048!8.37e-09!14;UBERON:0000117!8.37e-09!14;UBERON:0000171!8.37e-09!14;UBERON:0000170!8.37e-09!14;UBERON:0005597!8.37e-09!14;UBERON:0000118!8.37e-09!14;UBERON:0001048!5.84e-08!147;UBERON:0004872!6.36e-08!33;UBERON:0000926!3.66e-07!193;UBERON:0004120!3.66e-07!193;UBERON:0006603!3.66e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.99e-10,23;UBERON:0001009,3.99e-10,23;UBERON:0002048,1.39e-09,14;UBERON:0000117,1.39e-09,14;UBERON:0000171,1.39e-09,14;UBERON:0000170,1.39e-09,14;UBERON:0005597,1.39e-09,14;UBERON:0000118,1.39e-09,14;UBERON:0007100,2.21e-09,18;UBERON:0000948,2.21e-09,18;UBERON:0005498,2.21e-09,18;UBERON:0004140,2.21e-09,18;UBERON:0009881,2.21e-09,18;UBERON:0004141,2.21e-09,18;UBERON:0003084,2.21e-09,18;UBERON:0007005,2.21e-09,18;UBERON:0004139,2.21e-09,18;UBERON:0004291,2.21e-09,18;UBERON:0004872,6.08e-08,33|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.996860121687,7.813353445238,14.6586648312664,11.7646297606203,19.1252735788365,16.9928623560904,1.6366586336825,1.92616169317078,2.20256102594018,0.782391344348039,2.61630187656536,1.31811709640683,1.36100929351998,0.699932108126813,0,0,0,0,0.514518872071894,2.0057340795713,1.03134418455488,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0,0.768436610643109,1.24427534770173,1.75507719831198,1.26194976810829,0,1.10434270475807,0.489963196859816,1.15014565221884,0.919218786610021,0,0.255374676170375,0.614426133024974,0.395658863190582,0.548925861614458,0,0,1.68828783009504,1.06958773443767,0.883885756421003,0.996601765593721,0.745597783301202,0.302904773332736,1.058001841495,11.5945795480671,1.72084775396277,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0.505524445014783,1.1418387971906,2.07150306917737,1.1875371125186,1.38788261412909,0.913396434936424,1.38369298353635,0.753613202763113,2.3517741427141,1.50799909595611,2.71914464507811,1.87979163995885,0,2.10296904931632,0.883366073841574,0.969750506270444,0,0.585561594023094,1.46612694769419,0,0.599075622529601,0,0.508280908292259,0.898743836428936,0.915001205637253,0.502617408451458,0.521472960576829,0.511430914660661,0.62336413367868,0.162241263067758,2.24046600470696,1.7416975885413,0.252722758433675,1.47309299120532,2.86264974517948,1.60931473103431,2.70093194708024,3.31550599238573,2.17716797284249,1.7935920839879,1.68663104207512,0.776110112217047,2.58681591519411,3.02569728268511,3.51902248327898,2.41115305670332,1.94633074457919,2.78601733217733,2.26360350048738,4.37875387000685,0,0.257347907114715,0.284163499395593,8.49215667395558,7.27030785941398,8.28285482720668,11.1270025725049,14.3637889175605,9.71882811190483,12.0917651270212,13.9502168727802,17.6315666974426,9.37991144506839,5.08919138645195,7.21512404958116,5.26319954731196,2.85415149878366,4.83143107537338,0.210289948564127,0.92614151141356,0,0,2.55945900642281,2.55460339046482,1.80414445850931,1.81515172161008,1.55664630691409,0.190225626112559,0.474529061544512,0.494096864172033,1.00534083520108,0.795825888164603,0.974820435595601,0,0.216138049874694,0.597423819763102,1.51734320762465,1.82797620175566,1.1270773567308,1.22190796707189,3.87904974335251,2.87556861550306,2.33975187359752,1.62371162777562,1.72698600625512,2.34454611451421,0.592905254174298,2.16898637430922,1.96558995113203,0.449724224769707,0.405720242777006,1.20588579876208,1.01850340712568,2.5892652370573,2.2698931748505,1.37280706594041,8.62609239164127,2.60498663367952,2.49630138491648,1.01031551178845,0.896987067609561,1.4473305640901,10.7156850296631,3.97931964718018,3.25929952884052,3.90413697282933,3.75504397261603,4.85768146581266,2.85652369063216,7.61021226645415,7.72412206120336,9.30151696524855,10.0456504254217,7.37384916220821,8.46156411142888,7.81104916340163,0,0,0.491764273019036,0.827810238914197,0.80275294993896,0.937693492737625,0,2.27223834483936,0.631016438832513,0,1.29254038639679,0.238968797952552,0.891194696329576,0,0.809621403349789,0.584511715822624,0,1.28528526568723,2.55492153374884,0.890328018336276,3.09485222771795,1.97964147567043,2.65490276679926,2.91336763385978,0.604647113929502,1.69744571780308,1.18120757152309,1.84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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:215789 | |||
|HGNC= | |||
|MCL_coexpression_id=2537 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A3KGD2 | |||
|association_with_transcript=46bp_to_ENSMUST00000105543_5end | |||
|cluster_id=chr10:13044027..13044048,- | |||
|description=CAGE_peak_3_at_Phactr2_5end | |||
|id=chr10:13044027..13044048,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.77e-09!23;UBERON:0001009!1.77e-09!23;UBERON:0007100!8.01e-09!18;UBERON:0000948!8.01e-09!18;UBERON:0005498!8.01e-09!18;UBERON:0004140!8.01e-09!18;UBERON:0009881!8.01e-09!18;UBERON:0004141!8.01e-09!18;UBERON:0003084!8.01e-09!18;UBERON:0007005!8.01e-09!18;UBERON:0004139!8.01e-09!18;UBERON:0004291!8.01e-09!18;UBERON:0002048!8.37e-09!14;UBERON:0000117!8.37e-09!14;UBERON:0000171!8.37e-09!14;UBERON:0000170!8.37e-09!14;UBERON:0005597!8.37e-09!14;UBERON:0000118!8.37e-09!14;UBERON:0001048!5.84e-08!147;UBERON:0004872!6.36e-08!33;UBERON:0000926!3.66e-07!193;UBERON:0004120!3.66e-07!193;UBERON:0006603!3.66e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.99e-10,23;UBERON:0001009,3.99e-10,23;UBERON:0002048,1.39e-09,14;UBERON:0000117,1.39e-09,14;UBERON:0000171,1.39e-09,14;UBERON:0000170,1.39e-09,14;UBERON:0005597,1.39e-09,14;UBERON:0000118,1.39e-09,14;UBERON:0007100,2.21e-09,18;UBERON:0000948,2.21e-09,18;UBERON:0005498,2.21e-09,18;UBERON:0004140,2.21e-09,18;UBERON:0009881,2.21e-09,18;UBERON:0004141,2.21e-09,18;UBERON:0003084,2.21e-09,18;UBERON:0007005,2.21e-09,18;UBERON:0004139,2.21e-09,18;UBERON:0004291,2.21e-09,18;UBERON:0004872,6.08e-08,33 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.996860121687,7.813353445238,14.6586648312664,11.7646297606203,19.1252735788365,16.9928623560904,1.6366586336825,1.92616169317078,2.20256102594018,0.782391344348039,2.61630187656536,1.31811709640683,1.36100929351998,0.699932108126813,0,0,0,0,0.514518872071894,2.0057340795713,1.03134418455488,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0,0.768436610643109,1.24427534770173,1.75507719831198,1.26194976810829,0,1.10434270475807,0.489963196859816,1.15014565221884,0.919218786610021,0,0.255374676170375,0.614426133024974,0.395658863190582,0.548925861614458,0,0,1.68828783009504,1.06958773443767,0.883885756421003,0.996601765593721,0.745597783301202,0.302904773332736,1.058001841495,11.5945795480671,1.72084775396277,0,0,0.649776417447669,0.448026887097336,0.702222100658759,0,0,0,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0.505524445014783,1.1418387971906,2.07150306917737,1.1875371125186,1.38788261412909,0.913396434936424,1.38369298353635,0.753613202763113,2.3517741427141,1.50799909595611,2.71914464507811,1.87979163995885,0,2.10296904931632,0.883366073841574,0.969750506270444,0,0.585561594023094,1.46612694769419,0,0.599075622529601,0,0.508280908292259,0.898743836428936,0.915001205637253,0.502617408451458,0.521472960576829,0.511430914660661,0.62336413367868,0.162241263067758,2.24046600470696,1.7416975885413,0.252722758433675,1.47309299120532,2.86264974517948,1.60931473103431,2.70093194708024,3.31550599238573,2.17716797284249,1.7935920839879,1.68663104207512,0.776110112217047,2.58681591519411,3.02569728268511,3.51902248327898,2.41115305670332,1.94633074457919,2.78601733217733,2.26360350048738,4.37875387000685,0,0.257347907114715,0.284163499395593,8.49215667395558,7.27030785941398,8.28285482720668,11.1270025725049,14.3637889175605,9.71882811190483,12.0917651270212,13.9502168727802,17.6315666974426,9.37991144506839,5.08919138645195,7.21512404958116,5.26319954731196,2.85415149878366,4.83143107537338,0.210289948564127,0.92614151141356,0,0,2.55945900642281,2.55460339046482,1.80414445850931,1.81515172161008,1.55664630691409,0.190225626112559,0.474529061544512,0.494096864172033,1.00534083520108,0.795825888164603,0.974820435595601,0,0.216138049874694,0.597423819763102,1.51734320762465,1.82797620175566,1.1270773567308,1.22190796707189,3.87904974335251,2.87556861550306,2.33975187359752,1.62371162777562,1.72698600625512,2.34454611451421,0.592905254174298,2.16898637430922,1.96558995113203,0.449724224769707,0.405720242777006,1.20588579876208,1.01850340712568,2.5892652370573,2.2698931748505,1.37280706594041,8.62609239164127,2.60498663367952,2.49630138491648,1.01031551178845,0.896987067609561,1.4473305640901,10.7156850296631,3.97931964718018,3.25929952884052,3.90413697282933,3.75504397261603,4.85768146581266,2.85652369063216,7.61021226645415,7.72412206120336,9.30151696524855,10.0456504254217,7.37384916220821,8.46156411142888,7.81104916340163,0,0,0.491764273019036,0.827810238914197,0.80275294993896,0.937693492737625,0,2.27223834483936,0.631016438832513,0,1.29254038639679,0.238968797952552,0.891194696329576,0,0.809621403349789,0.584511715822624,0,1.28528526568723,2.55492153374884,0.890328018336276,3.09485222771795,1.97964147567043,2.65490276679926,2.91336763385978,0.604647113929502,1.69744571780308,1.18120757152309,1.84461088766356,2.58428293168221,1.81766864738753,0.712994756769443,0.316036757935816,0,2.06271086496374,0.340439605753788,2.52085531643834,2.06973894052407,1.28602221018955,2.6601035046341,3.0322698992352,2.13913726782757,1.522324745573,1.17335854031855,2.75381692122966,0.220528398054962,0.8244312647074,2.58343082713449,1.26657142349127,0.596861720015682,0.656563598980245,0,0.18542530201051,0.512612642393558,2.47664241555867,2.03713980106683,0.565105371014073,0.410082683163076,0.457556346413045,1.35982743995084,1.11961161858926,1.10559979043539,0,3.32152793260192,4.06638934253697,2.48412283890143,1.88179466413022,2.18362563746178,0.674321731924103,1.90102948168273,1.30877970992015,0.518459893167171,0,1.12738587736838,2.99033092087958,1.82004339502807,2.33341426012857,1.29159823477731,2.02747350588934,2.22978753426933,2.604087696879,2.20204623293993,1.44950472495604,2.59227005632079,0,1.21635129174099,1.23253148597793,0.649604114888975,1.07416017400489,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.381034033274999,0.201652370273681,0.38983152295901,0.481059208201647,0.116876902181569,0.906921534460845,0.221985953374065,0.179427713218951,0,2.89784391048286,0.93841237725591,1.46521299413812,0.857473516316263,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,3.1136204275253,1.59609949360412,1.87806966329548,2.43106717068294,4.61148957781561,2.38996560985018,2.66696073361938,2.06035057238894,1.60459604795908,1.51618327058278,3.54871019846336,2.26351609663291,2.62196220915671,3.777483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| |||
|short_description=p3@Phactr2 | |||
}} |
Revision as of 03:47, 4 August 2015
Short description: | p3@Phactr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Phactr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2537 |
Association with transcript: | 46bp_to_ENSMUST00000105543_5end |
EntrezGene: | 215789 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.99e-10 | 23 |
circulatory system | 3.99e-10 | 23 |
lung | 1.39e-09 | 14 |
respiratory tube | 1.39e-09 | 14 |
respiration organ | 1.39e-09 | 14 |
pair of lungs | 1.39e-09 | 14 |
lung primordium | 1.39e-09 | 14 |
lung bud | 1.39e-09 | 14 |
primary circulatory organ | 2.21e-09 | 18 |
heart | 2.21e-09 | 18 |
primitive heart tube | 2.21e-09 | 18 |
primary heart field | 2.21e-09 | 18 |
anterior lateral plate mesoderm | 2.21e-09 | 18 |
heart tube | 2.21e-09 | 18 |
heart primordium | 2.21e-09 | 18 |
cardiac mesoderm | 2.21e-09 | 18 |
cardiogenic plate | 2.21e-09 | 18 |
heart rudiment | 2.21e-09 | 18 |
splanchnic layer of lateral plate mesoderm | 6.08e-08 | 33 |