FFCP PHASE1:Hg19::chr2:202316169..202316237,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=66008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13206 | |||
|TSSclassifier=strong | |||
|UniProt=E7EV21 | |||
|association_with_transcript=0bp_to_ENST00000430254,ENST00000451703_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_TRAK2_5end | |||
|id=chr2:202316169..202316237,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.95e-24!115;UBERON:0001049!3.30e-16!57;UBERON:0005068!3.30e-16!57;UBERON:0006241!3.30e-16!57;UBERON:0007135!3.30e-16!57;UBERON:0002616!2.63e-14!59;UBERON:0000955!4.92e-14!69;UBERON:0006238!4.92e-14!69;UBERON:0003080!7.18e-14!42;UBERON:0002780!1.76e-13!41;UBERON:0001890!1.76e-13!41;UBERON:0006240!1.76e-13!41;UBERON:0001017!5.28e-13!82;UBERON:0001893!2.76e-12!34;UBERON:0002020!2.82e-12!34;UBERON:0003528!2.82e-12!34;UBERON:0005743!4.57e-12!86;UBERON:0002791!9.64e-12!33;UBERON:0000073!1.03e-11!94;UBERON:0001016!1.03e-11!94;UBERON:0001869!4.09e-11!32;UBERON:0003075!8.51e-10!86;UBERON:0007284!8.51e-10!86;UBERON:0000153!9.13e-09!129;UBERON:0007811!9.13e-09!129;UBERON:0000033!1.23e-08!123;UBERON:0002346!1.78e-08!90;UBERON:0002619!5.27e-08!22;UBERON:0000956!7.51e-08!25;UBERON:0000203!7.51e-08!25;UBERON:0004121!1.70e-07!169;UBERON:0001950!3.68e-07!20;UBERON:0003056!5.30e-07!61;UBERON:0000924!9.85e-07!173;UBERON:0006601!9.85e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.47e-10;34!UBERON:0002020;2.47e-10;34!UBERON:0001893;2.97e-10;34!UBERON:0002780;5.56e-10;41!UBERON:0001890;5.56e-10;41!UBERON:0002791;6.10e-10;32!UBERON:0001869;7.37e-10;32!UBERON:0000073;3.37e-09;53!UBERON:0002616;3.37e-09;53!UBERON:0002619;6.15e-08;22!UBERON:0000956;8.45e-08;25!UBERON:0000203;8.45e-08;25!UBERON:0001017;4.07e-07;75!UBERON:0001950;4.23e-07;20!UBERON:0007023;6.31e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.60e-23,114;UBERON:0001049,8.10e-16,56;UBERON:0005068,8.10e-16,56;UBERON:0006241,8.10e-16,56;UBERON:0007135,8.10e-16,56;UBERON:0000073,2.44e-14,53;UBERON:0002616,2.44e-14,53;UBERON:0000955,1.14e-13,68;UBERON:0006238,1.14e-13,68;UBERON:0002780,1.76e-13,41;UBERON:0001890,1.76e-13,41;UBERON:0003080,1.76e-13,41;UBERON:0006240,1.76e-13,41;UBERON:0001017,1.17e-12,81;UBERON:0001893,2.76e-12,34;UBERON:0003528,2.82e-12,34;UBERON:0002020,2.82e-12,34;UBERON:0001016,3.16e-12,89;UBERON:0010314,6.34e-12,132;UBERON:0002791,3.75e-11,32;UBERON:0001869,4.09e-11,32;UBERON:0003075,2.14e-10,82;UBERON:0007284,2.14e-10,82;UBERON:0002346,5.59e-09,86;UBERON:0002619,5.27e-08,22;UBERON:0000956,7.51e-08,25;UBERON:0000203,7.51e-08,25;UBERON:0010371,2.10e-07,104;UBERON:0004121,3.60e-07,171;UBERON:0000924,3.60e-07,171;UBERON:0006601,3.60e-07,171;UBERON:0001950,3.68e-07,20;UBERON:0003056,4.00e-07,61 | |||
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| |||
|short_description=p1@TRAK2 | |||
}} |
Revision as of 07:56, 21 January 2014
Short description: | p1@TRAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAK2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000430254, ENST00000451703_5end |
EntrezGene: | TRAK2 |
HGNC: | 13206 |
UniProt: | E7EV21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.60e-23 | 114 |
neural tube | 8.10e-16 | 56 |
neural rod | 8.10e-16 | 56 |
future spinal cord | 8.10e-16 | 56 |
neural keel | 8.10e-16 | 56 |
regional part of nervous system | 2.44e-14 | 53 |
regional part of brain | 2.44e-14 | 53 |
brain | 1.14e-13 | 68 |
future brain | 1.14e-13 | 68 |
regional part of forebrain | 1.76e-13 | 41 |
forebrain | 1.76e-13 | 41 |
anterior neural tube | 1.76e-13 | 41 |
future forebrain | 1.76e-13 | 41 |
central nervous system | 1.17e-12 | 81 |
telencephalon | 2.76e-12 | 34 |
brain grey matter | 2.82e-12 | 34 |
gray matter | 2.82e-12 | 34 |
nervous system | 3.16e-12 | 89 |
structure with developmental contribution from neural crest | 6.34e-12 | 132 |
regional part of telencephalon | 3.75e-11 | 32 |
cerebral hemisphere | 4.09e-11 | 32 |
neural plate | 2.14e-10 | 82 |
presumptive neural plate | 2.14e-10 | 82 |
neurectoderm | 5.59e-09 | 86 |
regional part of cerebral cortex | 5.27e-08 | 22 |
cerebral cortex | 7.51e-08 | 25 |
pallium | 7.51e-08 | 25 |
ecto-epithelium | 2.10e-07 | 104 |
ectoderm-derived structure | 3.60e-07 | 171 |
ectoderm | 3.60e-07 | 171 |
presumptive ectoderm | 3.60e-07 | 171 |
neocortex | 3.68e-07 | 20 |
pre-chordal neural plate | 4.00e-07 | 61 |