FFCP PHASE1:Hg19::chr2:202285303..202285324,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=66008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13206 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-71bp_to_CU691984,JF432400_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_7_at_TRAK2_5end | |||
|id=chr2:202285303..202285324,- | |||
|ontology_enrichment_celltype=CL:0000147!8.85e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;8.89e-35;10!CL:0002619;7.24e-29;3!CL:0000147;9.38e-25;14!CL:0000097;6.26e-18;5!CL:0000710;3.22e-17;20!CL:0000235;1.30e-14;6!CL:0002567;3.88e-14;3!CL:0000075;1.20e-12;27!CL:0002566;3.08e-11;1!CL:0000163;3.26e-10;9!CL:0002077;1.99e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.64e-35,10;CL:0000541,8.64e-35,10;CL:0002619,8.36e-29,3;CL:0000147,9.19e-25,14;CL:0000097,5.91e-18,5;CL:0002028,5.91e-18,5;CL:0000710,3.17e-17,20;CL:0000235,1.30e-14,6;CL:0002567,3.64e-14,3;CL:0000075,1.19e-12,27;CL:0002566,3.08e-11,1;CL:0000333,2.18e-10,41;CL:0000163,3.16e-10,9;CL:0000839,3.33e-10,66;CL:0000557,4.91e-10,67;CL:0002077,5.92e-10,34;CL:0000766,2.90e-09,72;CL:0000133,4.22e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.76e-13;3!UBERON:0005425;1.27e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;8.31e-20;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.06e-19,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.27e-10;1!UBERON:0001785;1.27e-10;1!UBERON:0002464;1.27e-10;1!UBERON:0004904;1.27e-10;1!UBERON:0001021;1.27e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.21e-10,1;UBERON:0001785,1.21e-10,1;UBERON:0002464,1.21e-10,1;UBERON:0004904,1.21e-10,1;UBERON:0001021,1.21e-10,1;UBERON:0003902,1.21e-10,1;UBERON:0005425,1.21e-10,1;UBERON:0002371,1.02e-08,76;UBERON:0001474,5.33e-08,82;UBERON:0004765,3.46e-07,90;UBERON:0000966,3.46e-07,6;UBERON:0005388,3.46e-07,6;UBERON:0001802,3.46e-07,6;UBERON:0002405,6.42e-07,93 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,1.11957737119962,7.44955431843653,1.54545340580512,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,1.47730203652438,0.702012795417713,0.743155811443641,0,0,0,0,0,0,0.492663237895943,0,5.80518723514162,5.33243827642757,2.5248486685276,8.12773046939764,7.63976851116555,11.7217447210047,0,5.44985711327615,4.80548892550268,11.4330573052231,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.438770794307945,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0.720599767084807,0,0.0787831823072236,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.18628920882415,0,0,3.03298235083296,1.14186133417987,0,0,0,0,0,0,0.378806010550178,0.754703705257725,0.889811221596536,1.60188047877847,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.235479278551542,0,0,0,0.215927591218621,0,2.50167904618297,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0.243835849964539,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0,0,0.310298987585686,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p7@TRAK2 | |||
}} |
Revision as of 07:56, 21 January 2014
Short description: | p7@TRAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRAK2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -71bp_to_CU691984, JF432400_5end |
EntrezGene: | TRAK2 |
HGNC: | 13206 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.64e-35 | 10 |
melanoblast | 8.64e-35 | 10 |
adult endothelial progenitor cell | 8.36e-29 | 3 |
pigment cell | 9.19e-25 | 14 |
mast cell | 5.91e-18 | 5 |
basophil mast progenitor cell | 5.91e-18 | 5 |
neurecto-epithelial cell | 3.17e-17 | 20 |
macrophage | 1.30e-14 | 6 |
light melanocyte | 3.64e-14 | 3 |
columnar/cuboidal epithelial cell | 1.19e-12 | 27 |
dark melanocyte | 3.08e-11 | 1 |
migratory neural crest cell | 2.18e-10 | 41 |
endocrine cell | 3.16e-10 | 9 |
myeloid lineage restricted progenitor cell | 3.33e-10 | 66 |
granulocyte monocyte progenitor cell | 4.91e-10 | 67 |
ecto-epithelial cell | 5.92e-10 | 34 |
myeloid leukocyte | 2.90e-09 | 72 |
neurectodermal cell | 4.22e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.21e-10 | 1 |
cranial nerve | 1.21e-10 | 1 |
nerve trunk | 1.21e-10 | 1 |
nerve connecting eye with brain | 1.21e-10 | 1 |
nerve | 1.21e-10 | 1 |
retinal neural layer | 1.21e-10 | 1 |
presumptive neural retina | 1.21e-10 | 1 |
bone marrow | 1.02e-08 | 76 |
bone element | 5.33e-08 | 82 |
skeletal element | 3.46e-07 | 90 |
retina | 3.46e-07 | 6 |
photoreceptor array | 3.46e-07 | 6 |
posterior segment of eyeball | 3.46e-07 | 6 |
immune system | 6.42e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.06e-19 | 2 |