FFCP PHASE1:Hg19::chr2:178128451..178128470,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1388 | |||
|description=CAGE_peak_at_chr2:178128451..178128470,+ | |||
|id=chr2:178128451..178128470,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.14e-29!42;CL:0000738!1.38e-28!140;CL:0000860!1.21e-27!45;CL:0000766!3.98e-23!76;CL:0002031!1.01e-22!124;CL:0002087!3.90e-22!119;CL:0000037!1.30e-21!172;CL:0000566!1.30e-21!172;CL:0000557!1.38e-21!71;CL:0002009!4.09e-20!65;CL:0002032!9.90e-20!165;CL:0000837!9.90e-20!165;CL:0002194!8.57e-19!63;CL:0000576!8.57e-19!63;CL:0000040!8.57e-19!63;CL:0000559!8.57e-19!63;CL:0000839!2.17e-18!70;CL:0000988!3.39e-18!182;CL:0000763!1.52e-15!112;CL:0000049!1.52e-15!112;CL:0002393!5.02e-08!9;CL:0002397!5.02e-08!9;CL:0000134!4.99e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-58;33!CL:0002057;1.53e-58;33!CL:0000576;2.15e-46;48!CL:0000473;1.64e-40;39!CL:0000234;1.64e-40;39!CL:0000766;6.27e-35;69!CL:0002087;3.19e-18;104!CL:0002393;6.56e-18;6!CL:0002397;6.56e-18;6!CL:0000763;1.54e-15;100!CL:0000738;2.32e-13;136!CL:0000988;2.29e-09;177!CL:0000623;4.45e-09;3!CL:0000767;4.64e-09;3!CL:0000094;1.90e-08;8!CL:0000875;2.35e-08;3!CL:0002396;2.35e-08;3!CL:0001014;6.45e-07;2!CL:0001016;6.45e-07;2!CL:0000219;6.48e-07;193!CL:0000624;7.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.53e-88,42;CL:0002057,2.53e-88,42;CL:0000473,6.70e-76,48;CL:0000234,6.70e-76,48;CL:0000766,2.13e-70,72;CL:0000557,1.92e-69,67;CL:0000738,4.84e-64,136;CL:0002009,2.81e-63,61;CL:0000839,1.87e-60,66;CL:0002194,1.61e-58,59;CL:0000576,1.61e-58,59;CL:0000040,1.61e-58,59;CL:0000559,1.61e-58,59;CL:0002031,1.46e-56,120;CL:0000037,6.94e-51,168;CL:0002032,7.43e-50,161;CL:0000837,7.43e-50,161;CL:0000763,7.60e-50,108;CL:0000049,7.60e-50,108;CL:0002087,8.56e-50,115;CL:0000988,1.53e-47,177;CL:0002393,8.52e-25,9;CL:0002397,8.52e-25,9;CL:0000134,9.74e-20,354;CL:0002320,4.71e-19,361;CL:0000219,1.21e-16,386;CL:0000048,1.05e-13,427;CL:0000034,1.56e-13,441;CL:0000723,2.67e-13,433;CL:0000767,3.95e-09,3;CL:0000623,4.17e-09,3;CL:0000825,4.17e-09,3;CL:0000094,1.83e-08,8;CL:0000875,1.99e-08,3;CL:0002396,1.99e-08,3;CL:0001014,5.44e-07,2;CL:0001016,5.44e-07,2;CL:0000624,6.36e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.42e-62;42!CL:0000049;1.92e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.19e-17!80;UBERON:0002390!3.84e-17!102;UBERON:0003061!3.84e-17!102;UBERON:0001474!2.63e-16!86;UBERON:0002193!4.04e-14!112;UBERON:0002405!4.90e-12!115;UBERON:0004765!6.30e-12!101;UBERON:0001434!6.30e-12!101;UBERON:0003081!2.53e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.88e-60,76;UBERON:0001474,1.13e-54,82;UBERON:0002390,7.72e-51,98;UBERON:0003061,7.72e-51,98;UBERON:0002405,4.02e-49,93;UBERON:0004765,8.63e-49,90;UBERON:0002193,5.31e-45,108;UBERON:0001434,9.40e-43,100;UBERON:0002204,5.97e-21,167;UBERON:0003081,1.98e-20,203;UBERON:0002384,4.03e-18,371;UBERON:0000926,6.83e-09,315;UBERON:0004120,6.83e-09,315;UBERON:0006603,6.83e-09,315 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.369363174230364,0,0.313454721478088,0,0.273748850145768,0,0.0764134057479513,0,0.0787107813136792,3.93364276848904,1.53531759238885,4.64448369948228,0.919421224478927,0.30120591877825,0.369754010166788,0.232401601740905,0.426507697462265,0.880801318004542,6.64794490238253,8.22232234627581,10.6335326650767,0,0,0.257575567634187,0.581592955118259,0.377875943688809,0.485168122375632,2.32429036905685,4.52284676824008,1.85823822537062,5.46615545412086,4.09857130446561,6.85798466676897,3.44745680736619,1.29096936716765,1.35426486594342,1.50593871634084,1.36453075028923,0.674170453335254,4.59125838556354,4.8139354061414,4.47535988059329,2.30895910130701,4.18873681005427,3.83602275479425,2.32167390902867,4.53908179752912,1.86846674698672,4.52247597462138,4.69334626578181,3.47502151528187,3.02699751316684,3.31449872388808,6.0127853613768,2.5350634357433,4.889898899196,4.82214884669265,2.58355851636939,2.10247649978109,1.44653028027372,1.71007646244749,1.59133341759272,2.19196984517561,1.75996244461323,0,0.889509253863555,0,0,0,0,0.954053754535364,1.70763890732835,2.34894875748376,1.91136614062614,0,2.24203425192614,0,0.590129310341499,1.96505381374582,1.85041349099558,0.668745981562712,0.32592226663359,0.946895611469467,0,0,1.47302953737419,0.443067789167242,0,0.640456598628376,0.130059347559878,0.328875809207352,1.10540007114339,0.579606171470105,0.14828656316206,0,0,0.679856056185397,1.14966148080576,0.68725489096526,0,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,1.00803371612366,0.267440195783507,0.724122019413995,0,0.670700859703636,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.261958150995425,0,0.370784442784429,0.649094787309367,0,0,0.715471872916026,1.14398982156026,0,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0,0.417989933073621,0,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,1.31780417436063,3.87780264148325,0.436094052142534,0,0.12663051166458,0.529636723252875,0.860509862246441,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0,0.468642863667593,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.612975591598039,0,0.226864366320042,0.179389635688862,0,0,0.900273288253207,0.309157587715317,1.28820270022815,0,0,0.0974370051611986,0.757301322732344,0,0,0.710019185033229,0,0,0.193260853163297,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,2.07328115540772,1.58531948758658,2.5248486685276,0.063497894292169,0.763976851116555,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,2.36436912242313,2.37190332345469,3.33691894327346,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0.24538298343828,0,0,0.415941723061614,0.535286966391485,0.157702415033935,0.117141414992713,0,0,2.0694614258501,0,0.184369168541703,0.173767228936166,0,0,0.206768026122887,1.94142780736755,0.960548020230999,0,1.66435439510497,0.30239029332968,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0.0920809889358963,0,0.364182336013434,0.131124414959424,0,0,1.56869953835371,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.247528499761764,0,0.650060246036521,0,0.193341436584244,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0.2023155617111,0,0.31481234683064,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0.822724546172388,0.648473311192717,0.540031437238115,0,0.106824071127473,0,0.980160863924127,0,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0.605399121573143,0,0.687010689511529,0.307240764308458,0,0.667396566847634,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0.439524537815682,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.333926115068718,0.16480387422676,0,0.398495976502139,0,0,0.20453736500431,0.246169610922139,0,0,0.358042349351218,0,0.295930216910801,2.3948309234694,0,0,0.0927680981618513,0,0,0.349839999984783,0,0,0,0.236387681767936,0,0,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.230850775511391,0.113942055847001,0.23056390438806,0.179515288819544,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0.611030144933625,0,0,0.104421949505455,0.134802265961354,0,0,0.364909578431332,0.19566461893209,0.242780379534093,0,0,0,0.505492637027904,1.65355761355942,0.207376382794494,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0.0730893170861856,0.164230914106418,0.290967049465258,0.176512253383001,0,0.137041924646751,0.19871461170299,0.126621591911757,0.195551382734803,0.240476460754601,0,0,0,0.343609788497747,0.686379991447858,0.288109595976299,0.124252535565433,0,0.407712618220842,0.418411385249333,0.407992870545287,0,0,0.273810757783986,1.27746588066972,0.429765441419957,0.525774708558629,0,0,0.717873024576814,0,0,0,0.134366944973453,0,1.16495949527454,0.393915911536118,0.0824158583811665,0.539228350833479,0.393709926058995,0.169346664131569,0,0.272406812223151,0.482259445395058,0.275078873194468,0.83088067605837,2.4747128070665,10.8332273638113,0.121499113316049,0.670869375198532,0,0.104909176269996,0,0.537862017998534,0.191915197319445,0,0,0,0,0,0.653174720218818,0,0,0.511164065356265,0.226624183040251,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0,0,0,0.197611631897944,0.121792598380896,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0.314108192500469,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.124192805882767,0.415045904808692,0,0.303298235083296,0,0,0,0.144921028610825,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0.466311601748341,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.322231671127465,0.464033759878494,0.796191777397232,0,0,0,0,0.385239660814607,0,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,0,0.414775308455192,0,0.797189041880179,0.817826971279221,0,2.45772908753719,0.211312123358627,0,0.213383459388282,0.172214979660816,0,0,0,0.622077260032973,0.383683113910955,0.107824811396682,0,0.218419276384028,0,0,0,0,0,0.157723490002507,0,0,0.3062454773532,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0,0,0.294443155503077,0.235939446695481,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0.606965604236632,0,0.177404740325278,0.230467975111559,0.514464028312255,0,0.131545547125698,0,0.111231401892069,0.156986185701028,0,0.560544326627578,0,0.431855182437243,0,0.285906176706625,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0.490751168076215,0.365753774946808,0,0.307988420568741,0,0,0,0.795803100645473,0.237840181555137,0,0.109940516745429,0.301925687133347,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0.705789743431384,0.160482733378337,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.253397002022874,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0,0.186224142887574,0.224263725161227,0.0636471582781649,0,0.435433495793923,0.342233301085281,0.26940821205835,0.0717222053926763,0.332660356546013,0.162806537221949,0,0,0.0898252021065869,2.34640942403454,0,0,0.665756774185513,0,0.320568492303233 | |||
|short_description=p@chr2:178128451..178128470,+ | |||
}} |
Revision as of 06:48, 21 January 2014
Short description: | p@chr2:178128451..178128470, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:178128451..178128470, + |
Coexpression cluster: | C1388_immature_CD14_Basophils_Mast_CD133_Peripheral_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.88e-60 | 76 |
bone element | 1.13e-54 | 82 |
hematopoietic system | 7.72e-51 | 98 |
blood island | 7.72e-51 | 98 |
immune system | 4.02e-49 | 93 |
skeletal element | 8.63e-49 | 90 |
hemolymphoid system | 5.31e-45 | 108 |
skeletal system | 9.40e-43 | 100 |
musculoskeletal system | 5.97e-21 | 167 |
lateral plate mesoderm | 1.98e-20 | 203 |
connective tissue | 4.03e-18 | 371 |
mesoderm | 6.83e-09 | 315 |
mesoderm-derived structure | 6.83e-09 | 315 |
presumptive mesoderm | 6.83e-09 | 315 |