FFCP PHASE1:Hg19::chr2:139259324..139259389,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27934 | |||
|TSSclassifier=strong | |||
|UniProt=Q6IQ16 | |||
|association_with_transcript=0bp_to_ENST00000280098,NM_001001664,uc002tvh.2_5end | |||
|coexpression_cluster_id=C468 | |||
|description=CAGE_peak_1_at_SPOPL_5end | |||
|id=chr2:139259324..139259389,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.47e-28!140;CL:0002031!3.42e-23!124;CL:0000766!4.13e-23!76;CL:0000037!4.41e-23!172;CL:0000566!4.41e-23!172;CL:0002087!4.95e-23!119;CL:0002032!1.57e-21!165;CL:0000837!1.57e-21!165;CL:0000988!5.32e-21!182;CL:0000557!4.10e-20!71;CL:0002057!1.56e-19!42;CL:0000839!3.41e-19!70;CL:0002009!1.98e-18!65;CL:0002194!3.06e-18!63;CL:0000576!3.06e-18!63;CL:0000040!3.06e-18!63;CL:0000559!3.06e-18!63;CL:0000763!1.70e-16!112;CL:0000049!1.70e-16!112;CL:0000860!2.75e-16!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-14;33!CL:0002057;1.83e-14;33!CL:0000473;8.56e-13;39!CL:0000234;8.56e-13;39!CL:0000576;1.15e-12;48!CL:0000766;4.88e-11;69!CL:0002087;9.28e-08;104!CL:0000738;2.03e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.35e-30,136;CL:0000766,7.34e-26,72;CL:0002031,4.12e-25,120;CL:0002087,5.36e-25,115;CL:0000037,1.45e-24,168;CL:0002032,5.51e-23,161;CL:0000837,5.51e-23,161;CL:0000988,8.83e-23,177;CL:0000557,9.99e-23,67;CL:0000839,9.58e-22,66;CL:0002009,4.79e-21,61;CL:0002194,6.70e-21,59;CL:0000576,6.70e-21,59;CL:0000040,6.70e-21,59;CL:0000559,6.70e-21,59;CL:0000473,8.14e-20,48;CL:0000234,8.14e-20,48;CL:0000860,1.55e-19,42;CL:0002057,1.55e-19,42;CL:0000763,4.44e-18,108;CL:0000049,4.44e-18,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.93e-31!115;UBERON:0002390!9.94e-23!102;UBERON:0003061!9.94e-23!102;UBERON:0002193!1.31e-18!112;UBERON:0001049!3.86e-18!57;UBERON:0005068!3.86e-18!57;UBERON:0006241!3.86e-18!57;UBERON:0007135!3.86e-18!57;UBERON:0002616!7.27e-16!59;UBERON:0003080!1.06e-15!42;UBERON:0002780!1.56e-15!41;UBERON:0001890!1.56e-15!41;UBERON:0006240!1.56e-15!41;UBERON:0002371!4.30e-15!80;UBERON:0001474!7.02e-14!86;UBERON:0002020!1.41e-13!34;UBERON:0003528!1.41e-13!34;UBERON:0001893!3.30e-13!34;UBERON:0000955!6.46e-13!69;UBERON:0006238!6.46e-13!69;UBERON:0002791!8.70e-13!33;UBERON:0001869!2.52e-12!32;UBERON:0000073!3.53e-12!94;UBERON:0001016!3.53e-12!94;UBERON:0002346!7.80e-12!90;UBERON:0001017!8.91e-12!82;UBERON:0005743!1.61e-11!86;UBERON:0003075!2.89e-11!86;UBERON:0007284!2.89e-11!86;UBERON:0004765!9.06e-11!101;UBERON:0001434!9.06e-11!101;UBERON:0002619!1.14e-10!22;UBERON:0002405!7.37e-10!115;UBERON:0001950!1.43e-09!20;UBERON:0000956!2.49e-09!25;UBERON:0000203!2.49e-09!25;UBERON:0000178!2.96e-08!15;UBERON:0000179!2.96e-08!15;UBERON:0000463!2.96e-08!15;UBERON:0003056!1.05e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.90e-12;41!UBERON:0001890;9.90e-12;41!UBERON:0003528;1.00e-11;34!UBERON:0002020;1.00e-11;34!UBERON:0002791;1.85e-11;32!UBERON:0001869;2.21e-11;32!UBERON:0001893;2.21e-11;34!UBERON:0002619;5.88e-11;22!UBERON:0000073;5.36e-10;53!UBERON:0002616;5.36e-10;53!UBERON:0001950;7.75e-10;20!UBERON:0000956;1.61e-09;25!UBERON:0000203;1.61e-09;25!UBERON:0007023;7.40e-09;114!UBERON:0000178;1.98e-08;15!UBERON:0000179;1.98e-08;15!UBERON:0000463;1.98e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.22e-30,114;UBERON:0002390,5.89e-25,98;UBERON:0003061,5.89e-25,98;UBERON:0002193,1.89e-20,108;UBERON:0001049,5.88e-18,56;UBERON:0005068,5.88e-18,56;UBERON:0006241,5.88e-18,56;UBERON:0007135,5.88e-18,56;UBERON:0002371,4.55e-17,76;UBERON:0000073,1.55e-16,53;UBERON:0002616,1.55e-16,53;UBERON:0001474,1.20e-15,82;UBERON:0002780,1.55e-15,41;UBERON:0001890,1.55e-15,41;UBERON:0003080,1.55e-15,41;UBERON:0006240,1.55e-15,41;UBERON:0002405,2.43e-14,93;UBERON:0003528,1.41e-13,34;UBERON:0002020,1.41e-13,34;UBERON:0001893,3.29e-13,34;UBERON:0004765,6.09e-13,90;UBERON:0000955,9.88e-13,68;UBERON:0006238,9.88e-13,68;UBERON:0002791,2.01e-12,32;UBERON:0001869,2.51e-12,32;UBERON:0001016,3.16e-12,89;UBERON:0001434,1.11e-11,100;UBERON:0001017,1.38e-11,81;UBERON:0002346,6.79e-11,86;UBERON:0002619,1.14e-10,22;UBERON:0003075,2.47e-10,82;UBERON:0007284,2.47e-10,82;UBERON:0001950,1.43e-09,20;UBERON:0000956,2.49e-09,25;UBERON:0000203,2.49e-09,25;UBERON:0000178,2.96e-08,15;UBERON:0000179,2.96e-08,15;UBERON:0000463,2.96e-08,15;UBERON:0003056,5.78e-08,61 | |||
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| |||
|short_description=p1@SPOPL | |||
}} |
Revision as of 05:37, 21 January 2014
Short description: | p1@SPOPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPOPL_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | 0bp_to_ENST00000280098, NM_001001664, uc002tvh.2_5end |
EntrezGene: | SPOPL |
HGNC: | 27934 |
UniProt: | Q6IQ16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.35e-30 | 136 |
myeloid leukocyte | 7.34e-26 | 72 |
hematopoietic lineage restricted progenitor cell | 4.12e-25 | 120 |
nongranular leukocyte | 5.36e-25 | 115 |
hematopoietic stem cell | 1.45e-24 | 168 |
hematopoietic oligopotent progenitor cell | 5.51e-23 | 161 |
hematopoietic multipotent progenitor cell | 5.51e-23 | 161 |
hematopoietic cell | 8.83e-23 | 177 |
granulocyte monocyte progenitor cell | 9.99e-23 | 67 |
myeloid lineage restricted progenitor cell | 9.58e-22 | 66 |
macrophage dendritic cell progenitor | 4.79e-21 | 61 |
monopoietic cell | 6.70e-21 | 59 |
monocyte | 6.70e-21 | 59 |
monoblast | 6.70e-21 | 59 |
promonocyte | 6.70e-21 | 59 |
defensive cell | 8.14e-20 | 48 |
phagocyte | 8.14e-20 | 48 |
classical monocyte | 1.55e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-19 | 42 |
myeloid cell | 4.44e-18 | 108 |
common myeloid progenitor | 4.44e-18 | 108 |