FFCP PHASE1:Hg19::chr2:109237793..109237813,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6616 | |||
|TSSclassifier=strong | |||
|UniProt=F8WE10 | |||
|association_with_transcript=64bp_to_ENST00000422797_5end | |||
|coexpression_cluster_id=C854 | |||
|description=CAGE_peak_11_at_LIMS1_5end | |||
|id=chr2:109237793..109237813,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.00e-20!52;CL:0000542!2.67e-19!53;CL:0000051!2.67e-19!53;CL:0000084!2.17e-16!25;CL:0000827!2.17e-16!25;CL:0000791!6.01e-16!18;CL:0000789!6.01e-16!18;CL:0002420!6.01e-16!18;CL:0002419!6.01e-16!18;CL:0000790!6.01e-16!18;CL:0000738!9.23e-15!140;CL:0002087!7.82e-14!119;CL:0002031!5.74e-12!124;CL:0000625!3.00e-11!11;CL:0000037!4.31e-10!172;CL:0000566!4.31e-10!172;CL:0002032!4.33e-09!165;CL:0000837!4.33e-09!165;CL:0000988!5.80e-09!182;CL:0000624!1.14e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.09e-27;18!CL:0000789;1.09e-27;18!CL:0002419;1.09e-27;18!CL:0000084;2.78e-21;25!CL:0000625;7.29e-17;11!CL:0000624;1.14e-14;6!CL:0000542;1.73e-10;53!CL:0000898;3.81e-08;3!CL:0000623;6.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.85e-28,18;CL:0000789,6.85e-28,18;CL:0002420,6.85e-28,18;CL:0002419,6.85e-28,18;CL:0000790,6.85e-28,18;CL:0000084,2.49e-21,25;CL:0000827,2.49e-21,25;CL:0000838,1.10e-19,52;CL:0000542,3.48e-19,53;CL:0000051,3.48e-19,53;CL:0000625,7.37e-17,11;CL:0000624,6.40e-15,6;CL:0000898,2.63e-08,3;CL:0000738,6.95e-07,136;CL:0002087,7.19e-07,115;CL:0000623,9.33e-07,3;CL:0000825,9.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.09e-27;18!CL:0000051;1.73e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.52e-09!15;UBERON:0000179!5.52e-09!15;UBERON:0000463!5.52e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.62e-17;15!UBERON:0000179;9.62e-17;15!UBERON:0000463;9.62e-17;15!UBERON:0002390;2.11e-08;32!UBERON:0006947;3.55e-07;3!UBERON:0004054;3.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.09e-16,15;UBERON:0000179,1.09e-16,15;UBERON:0000463,1.09e-16,15;UBERON:0006947,3.19e-07,3;UBERON:0004054,3.19e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.83392173795083,0.821005894499457,1.25937250101887,0,0.383829398097213,0.619264493264304,0,0,0,0,0.995184627411951,0.587200878669695,0.553995408531877,0.200544447470142,0.217010870715852,0.447830948479849,0.647787332037959,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0,2.64342657158052,0,0,3.73748563216283,2.75107533924415,7.19605246498282,1.33749196312542,1.95553359980154,1.89379122293893,0,13.5920757399912,6.18672405697158,12.1843642020992,15.4358202346059,11.1439448161337,9.23421367675135,0.657751618414705,0.829050053357545,3.18783394308558,1.63115219478266,1.87278579662799,2.09071047609954,15.5233799495666,15.3288197440768,19.2431369470273,29.6033039662818,8.60126618675061,2.60433381542567,2.85135613334512,3.76437797694432,6.52731716887534,4.99722906209383,5.44587679701239,4.92676798152628,1.00803371612366,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.327447688744282,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,0,0.301586917234893,0.185176890317059,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,3.02367830757947,1.70130116690864,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.07813787429759,1.02674429023799,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,0.647142602455851,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20810352485256,0.184161977871793,0,0,0,0.451199612907412,0.15403067420883,0.784349769176855,1.46139224653261,1.37217117560738,0,0,0,0,0.812839312631559,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.32227932288782,0.768760269460425,1.78657797492418,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0.670302275535787,0,0.282431402330337,2.15252686335615,1.68471475667626,0.443430153536676,3.21612760289743,2.02979043692868,3.0585488285695,1.70894156152249,2.62054953003568,2.05681136543097,2.59389324477087,2.16012574895246,3.17250070517708,0,0,0,0,0,0.355709216742071,0.637705090915289,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,4.45234820091624,0,1.68900326502395,0,2.48655523978033,11.840839149151,0,4.06179858021529,0,0.0898683511473268,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0.347249989866585,0,0,0,0,0,0,0,0.139423744278603,0.846452843541768,0,0,0,0,0.957003479195758,0,0,1.02193298195737,0,0,0,0,0,0.189753732724185,0,0.843992258112108,2.12202650606892,0,1.08194319871046,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0.0979923974143777,0,2.44617335538842,0,0,0,0,1.16386819786103,0.706049013532002,0,0,0,0,0,0.0801588202515337,0,0,0,3.20702469264564,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0.418411385249333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,12.148590143781,11.6070293183692,0,0,1.10327990218877,0.629455057619977,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0.427149650270779,0.943225830597996,0,0.496166021811951,0.592834895693833,2.67943716437971,0,0,0,0,0,0,0.886068179966986,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465788870628778,0,0.265841714557995,0,0,0,2.84809513243263,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0.327130788511688,0,0.983091635014877,0,0.39997479170986,0,0,0,0,0,0,0,0.970423302570136,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0.733714394086716,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0.39246546425257,0,0,0,1.72742072974897,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,1.69354820076372,0.22910686854405,2.79185747097888,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.308696632431779,0,5.17349025997675,0,1.4140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| |||
|short_description=p11@LIMS1 | |||
}} |
Revision as of 04:51, 21 January 2014
Short description: | p11@LIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LIMS1_5end |
Coexpression cluster: | C854_argyrophil_CD4_anaplastic_smallcell_nonsmall_seminal_CD8 |
Association with transcript: | 64bp_to_ENST00000422797_5end |
EntrezGene: | LIMS1 |
HGNC: | 6616 |
UniProt: | F8WE10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.85e-28 | 18 |
alpha-beta T cell | 6.85e-28 | 18 |
immature T cell | 6.85e-28 | 18 |
mature T cell | 6.85e-28 | 18 |
immature alpha-beta T cell | 6.85e-28 | 18 |
T cell | 2.49e-21 | 25 |
pro-T cell | 2.49e-21 | 25 |
lymphoid lineage restricted progenitor cell | 1.10e-19 | 52 |
lymphocyte | 3.48e-19 | 53 |
common lymphoid progenitor | 3.48e-19 | 53 |
CD8-positive, alpha-beta T cell | 7.37e-17 | 11 |
CD4-positive, alpha-beta T cell | 6.40e-15 | 6 |
naive T cell | 2.63e-08 | 3 |
leukocyte | 6.95e-07 | 136 |
nongranular leukocyte | 7.19e-07 | 115 |
natural killer cell | 9.33e-07 | 3 |
pro-NK cell | 9.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.09e-16 | 15 |
haemolymphatic fluid | 1.09e-16 | 15 |
organism substance | 1.09e-16 | 15 |
male genital duct | 3.19e-07 | 3 |
internal male genitalia | 3.19e-07 | 3 |