FFCP PHASE1:Hg19::chr2:109204876..109204889,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6616 | |||
|TSSclassifier=strong | |||
|UniProt=P48059 | |||
|association_with_transcript=-32bp_to_ENST00000393310,NM_001193488,uc002teh.2_5end | |||
|description=CAGE_peak_7_at_LIMS1_5end | |||
|id=chr2:109204876..109204889,+ | |||
|ontology_enrichment_celltype=CL:0000763!7.14e-69!112;CL:0000049!7.14e-69!112;CL:0000766!3.38e-57!76;CL:0000839!1.21e-52!70;CL:0000557!2.50e-51!71;CL:0000037!5.20e-51!172;CL:0000566!5.20e-51!172;CL:0002057!3.05e-49!42;CL:0002032!9.57e-48!165;CL:0000837!9.57e-48!165;CL:0002009!3.25e-47!65;CL:0000988!3.12e-46!182;CL:0002194!1.09e-45!63;CL:0000576!1.09e-45!63;CL:0000040!1.09e-45!63;CL:0000559!1.09e-45!63;CL:0000860!9.21e-45!45;CL:0000738!1.90e-38!140;CL:0002031!5.70e-32!124;CL:0002087!3.53e-27!119;CL:0000134!6.66e-11!358;CL:0002393!8.83e-11!9;CL:0002397!8.83e-11!9;CL:0002320!3.81e-10!365;CL:0000219!7.04e-08!390;CL:0000094!3.15e-07!8;CL:0000048!9.56e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.92e-68;33!CL:0002057;1.92e-68;33!CL:0000473;3.57e-60;39!CL:0000234;3.57e-60;39!CL:0000576;2.41e-51;48!CL:0000766;8.50e-48;69!CL:0000763;1.10e-30;100!CL:0000738;6.10e-14;136!CL:0002393;1.80e-13;6!CL:0002397;1.80e-13;6!CL:0000094;7.35e-13;8!CL:0002087;9.07e-13;104!CL:0000988;2.93e-11;177!CL:0000081;4.65e-09;11!CL:0000775;9.29e-08;3!CL:0000097;1.42e-07;5!CL:0000875;1.83e-07;3!CL:0002396;1.83e-07;3!CL:0000767;4.21e-07;3!CL:0000226;5.13e-07;3!CL:0000842;5.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.42e-109,72;CL:0000763,5.28e-102,108;CL:0000049,5.28e-102,108;CL:0000473,1.10e-96,48;CL:0000234,1.10e-96,48;CL:0000839,4.28e-96,66;CL:0000860,7.06e-94,42;CL:0002057,7.06e-94,42;CL:0000557,4.45e-91,67;CL:0002194,2.49e-89,59;CL:0000576,2.49e-89,59;CL:0000040,2.49e-89,59;CL:0000559,2.49e-89,59;CL:0002009,5.65e-86,61;CL:0000037,4.65e-67,168;CL:0000988,1.02e-62,177;CL:0002032,1.29e-62,161;CL:0000837,1.29e-62,161;CL:0000738,5.02e-56,136;CL:0002031,2.98e-46,120;CL:0002087,9.04e-45,115;CL:0000134,4.38e-22,354;CL:0002320,2.70e-21,361;CL:0002393,2.68e-19,9;CL:0002397,2.68e-19,9;CL:0000219,1.61e-18,386;CL:0000048,3.92e-15,427;CL:0000034,9.38e-15,441;CL:0000723,1.15e-14,433;CL:0000094,6.43e-13,8;CL:0000081,4.24e-09,11;CL:0000775,9.51e-08,3;CL:0000097,1.34e-07,5;CL:0002028,1.34e-07,5;CL:0000875,1.86e-07,3;CL:0002396,1.86e-07,3;CL:0000767,3.33e-07,3;CL:0000226,4.55e-07,3;CL:0000842,4.55e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.33e-67;42!CL:0000049;3.99e-27;108 | |||
|ontology_enrichment_disease=DOID:8692!4.34e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.90e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.21e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.49e-57!102;UBERON:0003061!2.49e-57!102;UBERON:0002193!2.29e-52!112;UBERON:0002371!1.07e-44!80;UBERON:0001474!1.58e-41!86;UBERON:0004765!3.73e-33!101;UBERON:0001434!3.73e-33!101;UBERON:0002405!2.26e-32!115;UBERON:0003081!1.64e-19!216;UBERON:0002204!5.37e-16!167;UBERON:0000178!4.48e-11!15;UBERON:0000179!4.48e-11!15;UBERON:0000463!4.48e-11!15;UBERON:0007023!2.54e-10!115;UBERON:0002384!1.62e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.29e-21;15!UBERON:0000179;4.29e-21;15!UBERON:0000463;4.29e-21;15!UBERON:0002390;2.95e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.01e-95,98;UBERON:0003061,4.01e-95,98;UBERON:0002193,9.01e-85,108;UBERON:0002371,1.37e-81,76;UBERON:0001474,1.47e-74,82;UBERON:0004765,1.25e-66,90;UBERON:0002405,5.26e-64,93;UBERON:0001434,1.72e-58,100;UBERON:0003081,4.38e-37,203;UBERON:0002204,4.71e-29,167;UBERON:0000178,3.85e-21,15;UBERON:0000179,3.85e-21,15;UBERON:0000463,3.85e-21,15;UBERON:0002384,3.21e-20,371;UBERON:0000926,8.08e-18,315;UBERON:0004120,8.08e-18,315;UBERON:0006603,8.08e-18,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,1.91914699048606,3.56077083626975,0,0,0,0,0,1.17440175733939,3.87796785972314,7.01905566145496,3.90619567288533,0.447830948479849,2.26725566213286,0.515151135268373,9.30548728189214,11.7141542543531,14.0698755488933,10.6917356976615,21.3807301771349,17.3435567701258,6.04154023876516,12.2957139133968,15.8443094025352,17.9267753983042,16.7826017731795,21.6682378550947,13.1769637679823,22.924116604859,22.4723484445085,18.977201326996,41.3998444928161,33.8848676673492,4.28806690242731,7.97854630486527,8.09827026012119,12.4789972610291,19.2910976394988,15.5705562248894,6.28121663141858,11.4726242052444,12.1625753034865,4.84319602106695,23.2014910672166,17.0889689218078,6.5489138756702,6.16552469898626,4.61249020118427,4.04383072127382,2.10247649978109,1.76798145366788,4.56020389985998,3.58050018958362,4.38393969035121,0,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,9.08732702233113,8.35822739036483,6.1160661838678,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,2.80805118167085,2.52672975890838,0,0,0,0,0,0,21.6771824674215,9.94947304349454,0.621984346622316,1.58531948758658,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,1.50677127429638,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0.167516265334349,0,2.24702107184155,8.97484377612075,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,3.8828556147351,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,1.0457418040996,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3127995877511,22.9391162142713,19.3680043639215,10.9586616710583,7.4045209155515,11.6725196014689,14.5808488054291,21.4143797599453,0,0,0,0,0,0,0,0.199579371432817,1.91505370132367,1.69338866179106,0,0.561594356226918,0,0.313359791546046,0,1.01575066680962,0,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0,0.19538809540204,0,0,2.70455678475983,1.33228787199128,2.81974010175699,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0,0,1.02314474045374,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,1.56980256395025,2.16075186470203,1.1279783030859,0,0.671286347903371,0,3.17873157960757,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.617792886840502,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.2249738915515,0.77380195455795,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03742326772554,0,0,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,0.427149650270779,0,0,0.496166021811951,0.197611631897944,0.243585196761792,0,0.544017803369474,0,0,0,0,0,0,0,0,0.665574309221114,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.478901577171454,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0,0.271878931907327,0.197318320688547,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.588925401344836,0,0,0,0.751871343838829,0.837952543656503,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.103432995861895,0,0,0.0645889098360061,0.248298857183432,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p7@LIMS1 | |||
}} |
Revision as of 04:50, 21 January 2014
Short description: | p7@LIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LIMS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000393310, NM_001193488, uc002teh.2_5end |
EntrezGene: | LIMS1 |
HGNC: | 6616 |
UniProt: | P48059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.01e-95 | 98 |
blood island | 4.01e-95 | 98 |
hemolymphoid system | 9.01e-85 | 108 |
bone marrow | 1.37e-81 | 76 |
bone element | 1.47e-74 | 82 |
skeletal element | 1.25e-66 | 90 |
immune system | 5.26e-64 | 93 |
skeletal system | 1.72e-58 | 100 |
lateral plate mesoderm | 4.38e-37 | 203 |
musculoskeletal system | 4.71e-29 | 167 |
blood | 3.85e-21 | 15 |
haemolymphatic fluid | 3.85e-21 | 15 |
organism substance | 3.85e-21 | 15 |
connective tissue | 3.21e-20 | 371 |
mesoderm | 8.08e-18 | 315 |
mesoderm-derived structure | 8.08e-18 | 315 |
presumptive mesoderm | 8.08e-18 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.21e-07 | 31 |