FFCP PHASE1:Hg19::chr22:50740068..50740112,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23654 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9104 | |||
|TSSclassifier=weak | |||
|UniProt=E7EQZ5,E2PU09 | |||
|association_with_transcript=-177bp_to_ENST00000414275,ENST00000432455_5end | |||
|coexpression_cluster_id=C839 | |||
|description=CAGE_peak_3_at_PLXNB2_5end | |||
|id=chr22:50740068..50740112,- | |||
|ontology_enrichment_celltype=CL:0000860!4.32e-14!45;CL:0002057!9.12e-13!42;CL:0002009!2.56e-08!65;CL:0002194!3.57e-08!63;CL:0000576!3.57e-08!63;CL:0000040!3.57e-08!63;CL:0000559!3.57e-08!63;CL:0000766!5.66e-07!76;CL:0000557!8.34e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.63e-14;3!CL:0000875;2.01e-12;3!CL:0002396;2.01e-12;3!CL:0000062;1.67e-11;9!CL:0000149;1.39e-10;4!CL:0000077;7.08e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.66e-14,3;CL:0000875,1.05e-12,3;CL:0002396,1.05e-12,3;CL:0000149,1.40e-10,4;CL:0000077,5.89e-10,19;CL:0000062,2.24e-09,11;CL:0000375,2.24e-09,11;CL:0000335,2.24e-09,11;CL:0002393,3.90e-07,9;CL:0002397,3.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000335;2.38e-09;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.03e-08!102;UBERON:0003061!6.03e-08!102;UBERON:0001474!7.73e-08!86;UBERON:0002193!3.37e-07!112;UBERON:0007625!4.73e-07!11;UBERON:0002371!5.67e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;5.63e-14;3!UBERON:0001782;5.63e-14;3!UBERON:0007625;5.79e-13;11!UBERON:0000488;3.28e-09;4!UBERON:0000966;1.54e-08;5!UBERON:0005388;1.54e-08;5!UBERON:0001802;1.54e-08;5!UBERON:0002108;1.25e-07;4!UBERON:0000019;3.22e-07;19!UBERON:0000047;3.22e-07;19!UBERON:0004088;3.22e-07;19!UBERON:0010230;3.22e-07;19!UBERON:0000970;7.98e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,5.66e-14,3;UBERON:0005424,5.66e-14,3;UBERON:0007625,9.46e-13,11;UBERON:0001781,1.40e-10,4;UBERON:0000488,6.35e-09,4;UBERON:0002108,1.33e-07,4;UBERON:0000966,3.60e-07,6;UBERON:0005388,3.60e-07,6;UBERON:0001802,3.60e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,1.57345710739562,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0,0,0.436194716338694,0.377875943688809,0.485168122375632,0,0.411167888021826,0.929119112685311,0.28769239232215,0.256160706529101,0.945928919554341,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0.612167784741805,0.641858054152187,1.27867425159808,0.329851300186716,0,0.852449501065388,0.870627715885752,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0,0,0.316462387440884,0.422510572623884,1.06302149982522,0.838634582033504,0,0.150176892841506,0,1.99508920618874,2.58591680358817,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,1.30361867064741,0,0,0.472674085820339,1.10864698731282,1.14185221401064,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0.715471872916026,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36094052142534,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0,0,0.717558542755448,0,0,1.50045548042201,0.309157587715317,0,0,0,0,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0.508681776931463,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,0,0,0.590789906681404,0,0.122988438543114,1.20097467208968,0.109750285408626,0,0,0.833296006426766,0,0,0,0.231860809950154,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0.532844358032199,1.14382394926518,1.08524321078289,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0,1.89948683245908,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,1.50473049863859,2.27407504055985,0,0,0.921845842708516,0.434418072340414,0.195801157462741,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,3.51182841698397,0,0,0,0,0,31.7998155144323,72.491236699635,45.8783536476667,0,12.545016680113,17.2444854834029,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,1.535386747868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0,0,0.30982349809975,0,0,0.589494246078727,0,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,1.13929437434833,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,1.61119057208048,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,3.03776431984571,0,0,0,0.290268993867255,0.219267951258557,0.246346371159628,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,1.28071796843612,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,11.3041562340105,0.279282401272254,0.229160424011684,0,0,0,0,1.88113722962834,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0.303747783290123,0,0.157611414598396,0.786818822024972,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.300515217994437,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,19.7286264064932,7.30784017502592,0,0,0,0.537266523244462,3.08801447160972,2.63140859494449,0,4.05119480368921,4.89933077893911,0.512483037175893,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0.211312123358627,0.19998739585493,0,0,0,0,0.139879507719444,1.24415452006595,0,0.862598491173454,0,1.85656384926424,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,1.00828678488687,0.138314504928436,0,0,0,0,0,0,0,0,18.3002924346973,0.0752103283492573,0,0,0,0,1.92212912082159,0.202612753855184,0,0,0,0.546974809018219,0,0,0.879356221798103,0.638812138197976,0.535701835878287,0.672567444437648,0.606965604236632,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0.828864656652147,0.51215543128185,0,0,0,0,0.4233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| |||
|short_description=p3@PLXNB2 | |||
}} |
Revision as of 16:47, 21 January 2014
Short description: | p3@PLXNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLXNB2_5end |
Coexpression cluster: | C839_Retinal_Mallassezderived_retina_medulla_mesothelioma_osteosarcoma_Saos2 |
Association with transcript: | -177bp_to_ENST00000414275, ENST00000432455_5end |
EntrezGene: | PLXNB2 |
HGNC: | 9104 |
UniProt: | E7EQZ5E2PU09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.66e-14 | 3 |
non-classical monocyte | 1.05e-12 | 3 |
CD14-low, CD16-positive monocyte | 1.05e-12 | 3 |
visual pigment cell | 1.40e-10 | 4 |
mesothelial cell | 5.89e-10 | 19 |
osteoblast | 2.24e-09 | 11 |
osteoprogenitor cell | 2.24e-09 | 11 |
mesenchyme condensation cell | 2.24e-09 | 11 |
intermediate monocyte | 3.90e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 5.66e-14 | 3 |
presumptive retinal pigmented epithelium | 5.66e-14 | 3 |
pigment epithelium of eye | 9.46e-13 | 11 |
layer of retina | 1.40e-10 | 4 |
atypical epithelium | 6.35e-09 | 4 |
small intestine | 1.33e-07 | 4 |
retina | 3.60e-07 | 6 |
photoreceptor array | 3.60e-07 | 6 |
posterior segment of eyeball | 3.60e-07 | 6 |