FFCP PHASE1:Hg19::chr22:43672014..43672021,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=53bp_to_ENST00000458463,uc003bdv.2_5end | |||
|description=CAGE_peak_1_at_ENST00000458463_5end,CAGE_peak_1_at_uc003bdv.2_5end | |||
|id=chr22:43672014..43672021,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.77e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:1001319;4.53e-12;1!CL:1000600;4.53e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,4.06e-12,1;CL:1000600,4.06e-12,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.37e-17!235;DOID:14566!7.25e-17!239;DOID:305!8.62e-17!106;DOID:0050687!9.56e-14!143;DOID:0050686!8.24e-08!137;DOID:1749!1.19e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4929;4.13e-22;2!DOID:3111;2.93e-12;1!DOID:3603;2.93e-12;1!DOID:3347;4.53e-12;1!DOID:0060085;1.01e-11;1!DOID:3165;1.01e-11;1!DOID:0060121;1.01e-11;1!DOID:2438;1.01e-11;1!DOID:4418;1.01e-11;1!DOID:201;5.84e-08;6!DOID:0060100;5.84e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.53e-22,2;DOID:3111,3.27e-12,1;DOID:3603,3.27e-12,1;DOID:3347,4.53e-12,1;DOID:0060085,7.76e-12,1;DOID:3165,7.76e-12,1;DOID:0060121,7.76e-12,1;DOID:2438,7.76e-12,1;DOID:4418,7.76e-12,1;DOID:201,5.36e-08,6;DOID:0060100,5.36e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003343!9.00e-08!4;UBERON:0004785!9.00e-08!4;UBERON:0006554!2.85e-07!44;UBERON:0001008!5.01e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;4.53e-12;1!UBERON:0001256;4.53e-12;1!UBERON:0001259;4.53e-12;1!UBERON:0004913;1.01e-11;1!UBERON:0003703;1.01e-11;1!UBERON:0001174;1.01e-11;1!UBERON:0004914;1.01e-11;1!UBERON:0002394;2.49e-11;4!UBERON:0003928;2.49e-11;4!UBERON:0000365;2.22e-09;5!UBERON:0005910;5.84e-08;6!UBERON:0003513;7.63e-07;7!UBERON:0002294;7.63e-07;7!UBERON:0001173;7.63e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.74e-16,6;UBERON:0003928,2.74e-16,6;UBERON:0004645,4.06e-12,1;UBERON:0001256,4.06e-12,1;UBERON:0001259,4.06e-12,1;UBERON:0004913,8.64e-12,1;UBERON:0003703,8.64e-12,1;UBERON:0001174,8.64e-12,1;UBERON:0004914,8.64e-12,1;UBERON:0002294,4.69e-11,9;UBERON:0001173,4.69e-11,9;UBERON:0004912,4.69e-11,9;UBERON:0000365,1.76e-09,5;UBERON:0005910,4.82e-08,6;UBERON:0003513,8.84e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0.441175890929576,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0.313359791546046,0,0,0.802940375518498,0,0,1.03051603426729,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,0,0,1.88723537409386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0.75901493089674,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,5.56196651833622,0.311064574191741,0,0,1.2557316736289,0,0,0,0,0.489961987071888,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,2.05562886970126,1.58971689362392,0,0,0.400794101257669,0,0.19980960958213,0,0,0,0.720273989940749,0.745515213392595,0.235694034616795,0.951329442515298,0.732219924186332,1.12198039399954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0.813741466409323,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07149096060705,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.183428598521679,0.808679663052368,0,2.0710797781803,0,0,0.20170506870352,0,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0.588901401691458,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99921281916676,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6819779387092,0,0,0,0,0,0,0,2.93051766999508,0,0,3.95230889268982,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000458463,p1@uc003bdv.2 | |||
}} |
Revision as of 16:26, 21 January 2014
Short description: | p1@ENST00000458463, p1@uc003bdv.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000458463_5end, CAGE_peak_1_at_uc003bdv.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000458463, uc003bdv.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 4.06e-12 | 1 |
lower urinary tract cell | 4.06e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.74e-16 | 6 |
digestive system duct | 2.74e-16 | 6 |
urinary bladder urothelium | 4.06e-12 | 1 |
wall of urinary bladder | 4.06e-12 | 1 |
mucosa of urinary bladder | 4.06e-12 | 1 |
hepatopancreatic ampulla | 8.64e-12 | 1 |
extrahepatic bile duct | 8.64e-12 | 1 |
common bile duct | 8.64e-12 | 1 |
duodenal papilla | 8.64e-12 | 1 |
biliary system | 4.69e-11 | 9 |
biliary tree | 4.69e-11 | 9 |
biliary bud | 4.69e-11 | 9 |
urothelium | 1.76e-09 | 5 |
transitional epithelium | 4.82e-08 | 6 |
trunk blood vessel | 8.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.53e-22 | 2 |
cystadenocarcinoma | 3.27e-12 | 1 |
mucinous cystadenocarcinoma | 3.27e-12 | 1 |
osteosarcoma | 4.53e-12 | 1 |
organ system benign neoplasm | 7.76e-12 | 1 |
skin benign neoplasm | 7.76e-12 | 1 |
integumentary system benign neoplasm | 7.76e-12 | 1 |
dermis tumor | 7.76e-12 | 1 |
cutaneous fibrous histiocytoma | 7.76e-12 | 1 |
connective tissue cancer | 5.36e-08 | 6 |
musculoskeletal system cancer | 5.36e-08 | 6 |