FFCP PHASE1:Hg19::chr22:43015897..43015913,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=1727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2873 | |||
|TSSclassifier=strong | |||
|UniProt=Q6TGM4 | |||
|association_with_transcript=39bp_to_AY421734_5end | |||
|description=CAGE_peak_13_at_CYB5R3_5end | |||
|id=chr22:43015897..43015913,- | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-09!180;CL:0000057!5.70e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.92e-13;13!CL:0002521;1.48e-07;3!CL:0002615;1.48e-07;3!CL:0002580;1.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.83e-11,15;CL:0002615,5.32e-08,3;CL:0002580,8.89e-08,3;CL:0002521,9.31e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.23e-08;3!DOID:127;1.23e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.20e-08,3;DOID:127,1.20e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000477!2.23e-09!286;UBERON:0004111!1.69e-08!241;UBERON:0000055!3.00e-08!69;UBERON:0004872!4.79e-08!84;UBERON:0002049!7.49e-08!79;UBERON:0007798!7.49e-08!79;UBERON:0000468!2.16e-07!659;UBERON:0000475!6.32e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.48e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,9.31e-08,3;UBERON:0003688,9.27e-07,6;UBERON:0002358,9.27e-07,6;UBERON:0003684,9.27e-07,6;UBERON:0001178,9.27e-07,6 | |||
|phase1_expression=1.2717486548939,3.21150785836475,1.83240725324762,2.00146596706261,1.78784437770915,2.61701557230111,2.53299878168311,1.26343974685366,1.82829939739887,0.491467873003018,2.09340350391728,0,0.791300934685361,0.495065411840187,0.331397375727916,0.672325146451775,1.20538905604795,0,0.487932798790507,0.123121058076788,1.02000345622126,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0.382067028739756,0.0821005894499457,0.393553906568396,0,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,0,0.434021741431704,0,0,0.515151135268373,0,0,0,0.464858073811369,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.639312809217652,0,0.50133791063589,0.579386075843295,0,1.94653948121054,0.283604451492204,0,0.351339142772504,0.785874452986276,1.09288586487763,0.370784442784429,0,0.348259474598534,0.26591592103773,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0.835979866147242,0.516833518338658,0.35576626268671,0.66944122552934,1.20848795132744,0,1.70843440283719,0.367663080345869,0,0,0.22452937262617,0.450445921933289,0,1.89853131913626,0,0,0,0,0,0.633152558322899,0.662045904066094,1.14734648299525,0.709336764396714,1.68203280042692,1.06748995729705,0.49333509683432,0,0.134710672069688,0.490385709340376,1.05950199351452,0,0.468642863667593,0.312160076830321,0.570471821544449,0.896692083310806,0.587172493218824,0.161872944368132,0.421352420106746,0.816616685019573,0.368502951935304,0.619954687054593,5.94001428641027,0.989067717114227,0.910161361938026,2.15585442544872,0,0.625592599359821,1.38532057742091,0.877955241761676,0.612975591598039,0.45071417671979,0,0.538168907066586,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,1.54584324027377,0.558350568994769,0.337552664482532,0.779496041289589,0.504867548488229,0.184099797284599,0.80823028409406,1.06502877754984,1.5112814734146,0.339121184620975,0.193260853163297,0.272746120590835,0.573609190778008,0.487894824518382,0.132529768321485,0.348581828608555,0,0,0.36497735907583,3.12899064659632,0.643240938192885,0,0.464367928031979,0.721879481669586,0.591534000199219,0,0.241011029883482,0.441175890929576,0.217879444092406,0,0.134831308160164,0.196221465125346,0,1.4763109092493,0,0.8231480226628,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.122988438543114,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0.231860809950154,0.352226082707465,1.29929802984966,0.925971025153221,1.52203321787679,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0,0.985326475791887,0.528290604079356,0.621984346622316,0.288239906833923,0.6312121671319,0.190493682876507,1.14596527667483,0,0,0.102827492703324,0.600686115687835,0.857479297891735,0.784917590417525,0.87192013766656,0.7333828582095,0.129271715757778,3.57656445851882,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,1.28680194292333,0.542621605391443,0.823240336780769,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.899756920638513,0,0.502257091432126,0,0.958499421966331,2.29723871668228,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.76228387266739,0,0,0,0.637938751653163,0,0,0.828831026872071,0.613457458595699,1.50051156317903,0,0.623912584592421,0.892144943985809,0.473107245101804,1.17141414992713,2.10662269809403,11.3703752027992,1.03473071292505,0,0.921845842708516,0.60818530127658,1.56640925970192,1.02943027143257,0,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,0.604780586659361,1.73675465473144,1.38115775959256,2.24528075546459,2.17836553734692,0.511707249066704,0.965123526861645,0,0.771048469013278,0.177561725313127,0.410635780069046,1.55776328755086,0.464841513839837,0.120859449591622,1.40354529212299,0.368323955743585,0.803701137152247,0.364182336013434,0.655622074797121,0,0.385076685522074,0.784349769176855,0,0.105551628892876,0,1.36074964221213,0.215915916102139,0,0,1.50506932156456,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.618246069886334,0.183138929636687,0.247528499761764,1.72279661398852,0,1.6068392984416,0.386682873168488,0,0.15350367472613,0.275673144969061,0.322260734604821,0.580066775656914,0.170453254832202,0.445160178233687,0.661139661443912,0.384380134730212,0,0.30347334256665,2.78907329578371,0.94443704049192,2.7881490806424,0.616067160352178,0.532306030317022,0,1.29726953372744,0.143124886741991,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0.95460974377781,3.13979456079692,0.359744915166629,0.274537029736055,0.117812402345686,0.404364963146632,0,0.421258456238981,0.975267478179181,0.243713489631284,0,0.545999645631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| |||
|short_description=p13@CYB5R3 | |||
}} |
Revision as of 16:22, 21 January 2014
Short description: | p13@CYB5R3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_13_at_CYB5R3_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_AY421734_5end |
EntrezGene: | CYB5R3 |
HGNC: | 2873 |
UniProt: | Q6TGM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.83e-11 | 15 |
adipocyte of omentum tissue | 5.32e-08 | 3 |
preadipocyte of the breast | 8.89e-08 | 3 |
subcutaneous fat cell | 9.31e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 9.31e-08 | 3 |
omentum | 9.27e-07 | 6 |
peritoneum | 9.27e-07 | 6 |
abdominal cavity | 9.27e-07 | 6 |
visceral peritoneum | 9.27e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.20e-08 | 3 |
leiomyoma | 1.20e-08 | 3 |