FFCP PHASE1:Hg19::chr22:38713333..38713350,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2453 | |||
|TSSclassifier=strong | |||
|UniProt=P49674,Q5U045,B0QY34,B0QY35 | |||
|association_with_transcript=62bp_to_ENST00000396832,NM_152221,uc003avj.2,uc003avl.1,uc003avp.1,uc003avq.1_5end | |||
|description=CAGE_peak_2_at_CSNK1E_5end | |||
|id=chr22:38713333..38713350,- | |||
|ontology_enrichment_celltype=CL:0002321!2.33e-14!248;CL:0000220!5.14e-14!246;CL:0000055!1.40e-13!180;CL:0000221!2.32e-10!71;CL:0002077!1.09e-09!33;CL:0000066!2.83e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002077;3.27e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.68e-13,250;CL:0000221,2.99e-10,72;CL:0002077,5.13e-10,34;CL:0000066,6.65e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.08e-20!365;UBERON:0000481!1.93e-18!347;UBERON:0000483!2.30e-17!309;UBERON:0000119!4.03e-17!312;UBERON:0000477!4.22e-16!286;UBERON:0000468!4.39e-14!659;UBERON:0004111!8.10e-14!241;UBERON:0000467!1.16e-12!625;UBERON:0000480!2.43e-12!626;UBERON:0000025!1.00e-11!194;UBERON:0004121!1.27e-11!169;UBERON:0000922!1.92e-11!612;UBERON:0000924!5.79e-11!173;UBERON:0006601!5.79e-11!173;UBERON:0002050!2.64e-10!605;UBERON:0005423!2.64e-10!605;UBERON:0000923!3.58e-10!604;UBERON:0005291!3.58e-10!604;UBERON:0006598!3.58e-10!604;UBERON:0002532!3.58e-10!604;UBERON:0000033!1.45e-09!123;UBERON:0000064!1.64e-09!219;UBERON:0002049!2.17e-09!79;UBERON:0007798!2.17e-09!79;UBERON:0003104!2.33e-09!238;UBERON:0009142!2.33e-09!238;UBERON:0000914!2.77e-09!83;UBERON:0002329!2.77e-09!83;UBERON:0003077!2.77e-09!83;UBERON:0003059!2.77e-09!83;UBERON:0007282!2.77e-09!83;UBERON:0009618!2.77e-09!83;UBERON:0007285!2.77e-09!83;UBERON:0004872!3.63e-09!84;UBERON:0001981!9.83e-09!60;UBERON:0007500!9.83e-09!60;UBERON:0004537!9.83e-09!60;UBERON:0006965!9.83e-09!60;UBERON:0002100!1.52e-08!216;UBERON:0000153!1.94e-08!129;UBERON:0007811!1.94e-08!129;UBERON:0001637!2.51e-08!42;UBERON:0003509!2.51e-08!42;UBERON:0004572!2.51e-08!42;UBERON:0000055!2.82e-08!69;UBERON:0003914!5.67e-08!118;UBERON:0000486!1.04e-07!82;UBERON:0005256!1.36e-07!143;UBERON:0003102!2.13e-07!95;UBERON:0001048!4.30e-07!168 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,4.94e-18,306;UBERON:0000119,9.84e-18,309;UBERON:0004111,6.36e-15,240;UBERON:0000025,1.59e-12,192;UBERON:0004121,3.89e-12,171;UBERON:0000924,3.89e-12,171;UBERON:0006601,3.89e-12,171;UBERON:0010314,1.29e-10,132;UBERON:0010371,2.06e-10,104;UBERON:0000922,2.99e-10,592;UBERON:0004872,2.66e-09,83;UBERON:0002049,3.48e-09,78;UBERON:0007798,3.48e-09,78;UBERON:0005423,6.60e-09,581;UBERON:0001637,6.91e-09,42;UBERON:0003509,6.91e-09,42;UBERON:0004572,6.91e-09,42;UBERON:0007500,1.19e-08,59;UBERON:0001981,1.19e-08,59;UBERON:0004537,1.19e-08,59;UBERON:0006965,1.19e-08,59;UBERON:0003102,1.33e-08,99;UBERON:0003914,1.49e-08,117;UBERON:0000055,2.71e-08,68;UBERON:0000486,1.96e-07,83;UBERON:0002050,2.92e-07,564;UBERON:0001048,6.13e-07,160;UBERON:0000033,8.90e-07,56 | |||
|phase1_expression=2.18014055124668,2.5692062866918,3.66481450649525,3.00219895059391,1.78784437770915,0.872338524100369,0,1.89515962028049,2.08948502559871,2.21160542851358,5.58240934377942,3.05817920982241,2.63766978228454,3.09415882400117,4.30816588446291,2.6893005858071,3.01347264011988,0,4.39139518911456,1.35433163884467,3.87601313364081,2.5076377718247,1.14494394852423,2.87436292653057,2.51085279189606,0.229240217243854,0,0.0787107813136792,0,1.91914699048606,0.464448369948228,5.51652734687356,5.4217065380085,5.54631015250181,0.46480320348181,0.142169232487422,0.587200878669695,1.10799081706375,0.200544447470142,0.434021741431704,0.447830948479849,0.32389366601898,0.77272670290256,0.290796477559129,0,0.242584061187816,0,0,0.619412741790207,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0.587237189370939,1.52909291250092,1.32171328579026,1.68152568894461,0.790152254325231,0,0.786021525498329,1.64481199199607,0,0.977766799900771,0,0,0.334231370655521,0,0,0.270803863765016,0.512365278902701,0.650296737799391,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.301150238155546,0.127986611154418,0,0,0.821127996921047,1.20964045934839,1.33720097891754,1.73789284659359,0,5.36560687762909,2.68511379871414,1.80719576192283,1.50401373190767,3.62116297402059,3.1811437882044,3.89307896242109,3.11964896641424,3.54767035940102,3.07421749925941,1.37528029272598,5.46442932438813,5.56176664176644,1.29818957461873,0.696518949197069,0.26591592103773,4.05434061319081,2.28797964312051,4.82894751728434,5.16782259153433,2.58070378531837,3.81854551768354,3.95715559346807,5.03399323451887,2.47606237746061,4.59788926380983,2.58416759169329,2.49036383880697,2.34304428935269,6.0424397566372,1.52054421143703,5.6134273236079,1.83831540172934,2.43042584364528,1.42879565254528,2.02076435363553,2.47745257063309,1.53316637465883,4.74632829784064,6.77846452542507,0,0,3.05265836499774,2.98183171017191,1.8994576749687,2.1185468930115,0,2.12801029319014,5.04609840128076,6.4049397437823,10.6067045819379,2.48968828319813,1.61652806483626,2.45192854670188,1.81628913173918,3.45705554687999,2.10889288650417,4.37024107562449,2.2818872861778,5.82849854152024,1.87895197830024,1.13311061057692,1.40450806702248,3.47062091133319,3.93069815397658,3.20309921644873,4.75201142912821,5.43987244412825,1.82032272387605,2.87447256726495,2.02003336744879,3.00284447692714,4.43302584774693,3.07284334616587,8.58165828237255,8.56356935767602,4.53728732640084,2.15267562826634,3.20336083227851,1.69545520927649,2.10063767259082,2.57631323096097,2.57640540045629,4.83903826462134,3.37552664482532,1.46155507741798,0.757301322732344,1.84099797284599,0.484938170456436,3.19508633264953,2.01504196455281,4.91725717700414,8.11695583285847,7.36414525595254,11.7589884109492,2.6834215348511,4.24095258628753,2.44007280025989,3.00617059544574,3.02785021050754,2.55484151353081,4.69348596989448,8.36213219650751,5.52539685409922,3.71494342425583,3.60939740834793,5.44211280183282,2.69735504124963,4.57920956778616,3.639701100169,3.7039505495709,5.45722423955522,4.58426447744559,3.13954344200554,2.30848294167834,0.738155454624648,2.80483547606892,4.5273141246454,2.94017422771084,0,0.982827216677626,1.18157981336281,0,1.10689594688802,2.40194934417936,5.04851312879678,4.49607013030478,3.61904300681871,6.38860271593854,2.6064664424826,4.15973914111831,1.44331342025273,2.78232971940184,1.99594780200897,1.87676382089396,2.77791307545966,2.85381228351897,0,0.858486162094873,0.984868024349589,0.468008530278475,0.445893486866185,5.62403003920662,5.54341023056236,5.81277898693785,5.28395283946805,6.39394664730716,10.3513323374607,0,0.176096868026452,0,0.432359860250884,0.37872730027914,4.06386523469882,8.78573378784039,3.51652341630141,8.55362230113526,5.75833959138612,4.20480280981484,4.57322292208925,1.90622843387113,0.43596006883328,2.42016343209135,3.74887975697556,7.15312891703765,2.535908257668,2.6593811658487,5.2003718455683,2.31486636835928,5.67396528093113,2.39779961114489,4.71827379071887,4.88359444852299,0,1.95441710576241,1.77695974371273,2.37585561880029,2.41151501647669,2.61460037580088,3.09916272664377,0,1.50677127429638,0,3.83399768786532,3.44585807502342,2.85273810081437,1.73737568001095,2.87666851570537,2.50685348535854,0.112085143993527,1.77327684181734,1.2937654491571,1.15508732651774,2.28685161800217,2.60279707715243,7.73288812777695,8.20829700138309,10.8449587781038,0,0,0,4.41689370188904,2.00068208423871,2.17012018959788,4.36738809214695,4.46072471992904,2.36553622550902,2.6942525448324,1.50473049863859,0,4.1389228517002,3.32112799267718,6.0841825618762,2.08520674723399,3.32861967686659,2.40200396667599,0.413536052245775,0.431428401637234,0.853820462427555,1.51563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| |||
|short_description=p2@CSNK1E | |||
}} |
Revision as of 15:58, 21 January 2014
Short description: | p2@CSNK1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSNK1E_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000396832, NM_152221, uc003avj.2, uc003avl.1, uc003avp.1, uc003avq.1_5end |
EntrezGene: | CSNK1E |
HGNC: | 2453 |
UniProt: | P49674Q5U045B0QY34B0QY35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.68e-13 | 250 |
ectodermal cell | 2.99e-10 | 72 |
ecto-epithelial cell | 5.13e-10 | 34 |
epithelial cell | 6.65e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium | 4.94e-18 | 306 |
cell layer | 9.84e-18 | 309 |
anatomical conduit | 6.36e-15 | 240 |
tube | 1.59e-12 | 192 |
ectoderm-derived structure | 3.89e-12 | 171 |
ectoderm | 3.89e-12 | 171 |
presumptive ectoderm | 3.89e-12 | 171 |
structure with developmental contribution from neural crest | 1.29e-10 | 132 |
ecto-epithelium | 2.06e-10 | 104 |
embryo | 2.99e-10 | 592 |
splanchnic layer of lateral plate mesoderm | 2.66e-09 | 83 |
vasculature | 3.48e-09 | 78 |
vascular system | 3.48e-09 | 78 |
developing anatomical structure | 6.60e-09 | 581 |
artery | 6.91e-09 | 42 |
arterial blood vessel | 6.91e-09 | 42 |
arterial system | 6.91e-09 | 42 |
epithelial tube open at both ends | 1.19e-08 | 59 |
blood vessel | 1.19e-08 | 59 |
blood vasculature | 1.19e-08 | 59 |
vascular cord | 1.19e-08 | 59 |
surface structure | 1.33e-08 | 99 |
epithelial tube | 1.49e-08 | 117 |
vessel | 2.71e-08 | 68 |
multilaminar epithelium | 1.96e-07 | 83 |
embryonic structure | 2.92e-07 | 564 |
primordium | 6.13e-07 | 160 |
head | 8.90e-07 | 56 |