FFCP PHASE1:Hg19::chr22:35695827..35695911,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10043 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11982 | |||
|TSSclassifier=strong | |||
|UniProt=F8W928,B3KUU1,F8WAW7,F8WA65,F8WB30,E7EPD0,F8WE29,F8WBB0,Q6UW50,E7EPZ3 | |||
|association_with_transcript=0bp_to_ENST00000337040,ENST00000382034,ENST00000395736,ENST00000404284,ENST00000412456,ENST00000424387,ENST00000436462,ENST00000439512,ENST00000449508,ENST00000450839,ENST00000451197,ENST00000465529,ENST00000487670_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_TOM1_5end | |||
|id=chr22:35695827..35695911,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.66e-26!76;CL:0002057!6.76e-26!42;CL:0002009!4.32e-22!65;CL:0000557!5.14e-22!71;CL:0002194!2.30e-21!63;CL:0000576!2.30e-21!63;CL:0000040!2.30e-21!63;CL:0000559!2.30e-21!63;CL:0000860!2.74e-21!45;CL:0000839!3.49e-20!70;CL:0000048!7.67e-11!430;CL:0002320!8.89e-11!365;CL:0000723!6.42e-10!436;CL:0000134!1.47e-09!358;CL:0000763!3.47e-09!112;CL:0000049!3.47e-09!112;CL:0000034!3.92e-09!444;CL:0000738!4.65e-08!140;CL:0000219!6.59e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.79e-20;33!CL:0002057;2.79e-20;33!CL:0000473;1.67e-19;39!CL:0000234;1.67e-19;39!CL:0000576;4.52e-15;48!CL:0000766;1.22e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.77e-30,72;CL:0000473,7.51e-29,48;CL:0000234,7.51e-29,48;CL:0000860,6.76e-26,42;CL:0002057,6.76e-26,42;CL:0002009,1.11e-25,61;CL:0000557,2.25e-25,67;CL:0002194,5.94e-25,59;CL:0000576,5.94e-25,59;CL:0000040,5.94e-25,59;CL:0000559,5.94e-25,59;CL:0000839,2.24e-23,66;CL:0000048,6.68e-12,427;CL:0002320,8.26e-12,361;CL:0000723,6.32e-11,433;CL:0000763,1.49e-10,108;CL:0000049,1.49e-10,108;CL:0000134,1.58e-10,354;CL:0000034,4.32e-10,441;CL:0000738,3.68e-09,136;CL:0000219,1.09e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.02e-20!80;UBERON:0003081!4.46e-20!216;UBERON:0002193!3.02e-19!112;UBERON:0002204!4.04e-19!167;UBERON:0002390!6.31e-19!102;UBERON:0003061!6.31e-19!102;UBERON:0002405!8.48e-19!115;UBERON:0001474!1.98e-18!86;UBERON:0004765!3.80e-17!101;UBERON:0001434!3.80e-17!101;UBERON:0002384!3.46e-10!375;UBERON:0000926!4.21e-10!448;UBERON:0004120!4.21e-10!448;UBERON:0006603!4.21e-10!448;UBERON:0007023!7.33e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.70e-23,76;UBERON:0003081,4.17e-23,203;UBERON:0002193,1.74e-21,108;UBERON:0002204,2.50e-21,167;UBERON:0002390,2.78e-21,98;UBERON:0003061,2.78e-21,98;UBERON:0004765,3.42e-21,90;UBERON:0001474,5.03e-21,82;UBERON:0002405,1.19e-20,93;UBERON:0001434,9.81e-20,100;UBERON:0000926,1.13e-16,315;UBERON:0004120,1.13e-16,315;UBERON:0006603,1.13e-16,315;UBERON:0002384,3.53e-11,371;UBERON:0007023,7.40e-07,114 | |||
|phase1_expression=89.3857626011139,73.0082786468252,75.2696517872486,81.0593716660356,75.9833860526389,117.76570075355,134.248935429205,51.1693097475733,97.1610536903399,31.4539438721931,76.0603273089946,45.8726881473362,53.5446965803761,59.2840830678623,78.2097806717881,55.1306620090456,53.03711846611,50.3913962367288,49.7691454766317,55.158234018401,52.0201762672845,62.0640348526614,18.8915751506497,16.4249310087461,14.0607756346179,21.3193402036784,18.226330857888,22.2751511117712,153.018703694224,129.734336556858,222.625585328517,48.7293248973831,45.1808878167375,42.5217111691806,6.81711365106654,12.0843847614308,15.2672228454121,281.983662942726,334.508138380196,245.439294779628,98.0749777170869,80.001735506688,97.6211401333567,234.527359151438,264.513160582167,218.325655069035,391.410498149173,364.294748787338,430.801561915089,416.578584082474,412.162576805323,364.182634028421,417.831765052782,412.464712810065,469.929908482366,378.367102480635,358.325775025951,324.500711538702,404.642905714333,385.435761518388,368.258184460248,308.740816974766,323.729516319908,309.439168886736,428.639045454419,381.282870992446,429.747351806947,394.711653118344,373.381769588864,405.491573064453,318.440138385152,385.954962514968,349.690938122177,84.9246250974006,98.0105822838851,103.152053590121,168.605275350889,147.924239448884,192.709978449799,76.6684280663959,76.7818373988488,75.8056238123231,12.3197371122926,8.7382177801941,13.3426388079533,20.4830506831923,17.2170274425485,13.2193061189531,10.5767179645578,16.2189138271012,34.7219911156764,41.1066032559657,31.728677934394,25.1125524300149,73.4266217505812,17.3833495951551,80.4542959765577,90.3924754323079,98.0719150227659,47.8153376817339,73.6584322591914,64.3889015799237,62.3445530905316,49.2434219432467,68.9377823491119,68.6755073209225,70.409004578904,41.5015875911187,42.9195846947598,35.3541494897904,30.951201992015,46.3684937176084,51.7520105435591,46.0170224314307,48.0863409502893,33.1996374103869,49.4354436746478,50.169607040464,45.5435445635105,31.2194106037615,19.5325036156926,16.1576847556224,41.5587328654653,42.8755147367302,34.9806034346568,35.5165878066025,32.8451198768419,59.6755959945208,69.5344509037119,52.8609074172216,39.0090986102339,42.2541541613291,37.4637306201544,45.5413332004553,104.779623322901,63.7324683427624,96.229599593183,79.3214838593296,20.5140553246027,18.6252693868554,19.499322423874,64.2452365316281,33.8794618112064,24.8425576665568,55.8221517086055,55.7215159357655,65.1494006542439,59.3841654520301,46.3315877731904,47.9180176715139,39.9512438807077,42.1514951602001,34.3669096591518,36.1797082831366,42.3694430572005,38.7916439135495,39.5000486754572,34.8862624878594,36.9996913194179,47.5303270125832,62.0357148348086,40.2944216030812,44.4192944737669,29.4130464276695,47.7983749250238,19.8245396790657,18.6359379279721,15.7656072676651,47.5281576144238,56.0066739145196,26.1978493820482,656.266478831595,713.515686032919,41.8650290056833,99.891362290759,32.9239330327907,61.0406323548939,49.0490621480471,29.792144104662,42.6114976108153,66.1843773524171,68.3269109115533,49.1713435931631,31.6570079363767,31.8750711071245,111.39906674667,79.5122775782398,37.2571076615737,24.0363259159347,42.7853866158337,27.050211179876,14.0921398372518,9.71237666208789,10.2529088892641,30.4189715169791,16.2141298851534,49.1830718396644,83.1602000097437,88.2742937524448,109.219363432563,166.000790759551,15.4869224837741,9.38388899039731,18.5632957374403,60.5789116815556,86.1230706195245,108.17140241275,22.1192757162041,43.5916814723935,46.3419533736291,37.5119465052424,50.4153041421796,53.3812101455113,124.440380842039,70.9105222623357,43.2067410537642,54.7595969005936,105.51731763404,57.807336347364,44.4526656251733,64.6117458380238,48.2602550510397,31.5382701697507,37.6858663668429,35.4569956768085,22.6575630357313,28.0539524098069,30.2167871772986,26.1436371456416,29.1287564593191,30.7831438068267,23.3585509808531,125.159625863853,112.567164183755,89.7876988791123,59.9034627161253,51.9753226802102,26.7373368090047,27.1421351025744,24.1011029883482,26.1396715375774,30.2852427288445,26.5743093404428,32.6291765747598,29.6294412339273,36.5509799099071,35.4314618219831,60.3039627354817,67.0865638470182,101.436010856024,122.952383777176,89.437276717664,63.2145200149102,15.4512084795128,28.9022830576317,36.0292401626904,36.7663456118896,52.8288240310812,11.158715937691,13.1475592125112,48.8712457965487,23.9185000614303,20.2063878835383,34.8950518974981,50.3683298271675,54.4261508059248,50.9284063834272,52.5101460167491,22.915927540819,24.0376125386564,114.244690824552,95.473740176809,90.0704843469693,37.4935335947108,51.2345491006522,39.1299268388987,13.1651028373187,7.55648240136301,18.4023685999301,24.6331618947972,55.294416560306,85.0045273717165,82.148373447668,76.3766722229599,99.5646982501211,153.559347074428,209.819230505984,124.882885596575,34.8585200264267,61.870669915847,74.3148724839503,37.4517821713505,46.647727365161,22.8815451761364,86.99986470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| |||
|short_description=p1@TOM1 | |||
}} |
Revision as of 15:32, 21 January 2014
Short description: | p1@TOM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TOM1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000337040, ENST00000382034, ENST00000395736, ENST00000404284, ENST00000412456, ENST00000424387, ENST00000436462, ENST00000439512, ENST00000449508, ENST00000450839, ENST00000451197, ENST00000465529, ENST00000487670_5end |
EntrezGene: | TOM1 |
HGNC: | 11982 |
UniProt: | F8W928B3KUU1F8WAW7F8WA65F8WB30E7EPD0F8WE29F8WBB0Q6UW50E7EPZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.77e-30 | 72 |
defensive cell | 7.51e-29 | 48 |
phagocyte | 7.51e-29 | 48 |
classical monocyte | 6.76e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.76e-26 | 42 |
macrophage dendritic cell progenitor | 1.11e-25 | 61 |
granulocyte monocyte progenitor cell | 2.25e-25 | 67 |
monopoietic cell | 5.94e-25 | 59 |
monocyte | 5.94e-25 | 59 |
monoblast | 5.94e-25 | 59 |
promonocyte | 5.94e-25 | 59 |
myeloid lineage restricted progenitor cell | 2.24e-23 | 66 |
multi fate stem cell | 6.68e-12 | 427 |
connective tissue cell | 8.26e-12 | 361 |
somatic stem cell | 6.32e-11 | 433 |
myeloid cell | 1.49e-10 | 108 |
common myeloid progenitor | 1.49e-10 | 108 |
mesenchymal cell | 1.58e-10 | 354 |
stem cell | 4.32e-10 | 441 |
leukocyte | 3.68e-09 | 136 |
motile cell | 1.09e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.70e-23 | 76 |
lateral plate mesoderm | 4.17e-23 | 203 |
hemolymphoid system | 1.74e-21 | 108 |
musculoskeletal system | 2.50e-21 | 167 |
hematopoietic system | 2.78e-21 | 98 |
blood island | 2.78e-21 | 98 |
skeletal element | 3.42e-21 | 90 |
bone element | 5.03e-21 | 82 |
immune system | 1.19e-20 | 93 |
skeletal system | 9.81e-20 | 100 |
mesoderm | 1.13e-16 | 315 |
mesoderm-derived structure | 1.13e-16 | 315 |
presumptive mesoderm | 1.13e-16 | 315 |
connective tissue | 3.53e-11 | 371 |
adult organism | 7.40e-07 | 114 |