FFCP PHASE1:Hg19::chr22:28197497..28197544,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4330 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7180 | |||
|TSSclassifier=strong | |||
|UniProt=Q10571 | |||
|association_with_transcript=-11bp_to_ENST00000302326,NM_002430,uc003adj.2_5end | |||
|coexpression_cluster_id=C4092 | |||
|description=CAGE_peak_2_at_MN1_5end | |||
|id=chr22:28197497..28197544,- | |||
|ontology_enrichment_celltype=CL:0000057!3.09e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000128;3.38e-07;7!CL:0000126;3.38e-07;7!CL:0000127;3.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.06e-09,76;CL:0000128,2.55e-07,7;CL:0000126,2.55e-07,7;CL:0000127,2.55e-07,7;CL:0002453,2.55e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.46e-14!659;UBERON:0000033!2.63e-13!123;UBERON:0000153!7.50e-13!129;UBERON:0007811!7.50e-13!129;UBERON:0004121!3.73e-12!169;UBERON:0000467!8.06e-12!625;UBERON:0000924!9.40e-12!173;UBERON:0006601!9.40e-12!173;UBERON:0000480!1.28e-11!626;UBERON:0000062!1.94e-11!511;UBERON:0000475!3.92e-11!365;UBERON:0000922!4.53e-11!612;UBERON:0000923!5.08e-10!604;UBERON:0005291!5.08e-10!604;UBERON:0006598!5.08e-10!604;UBERON:0002532!5.08e-10!604;UBERON:0003075!5.39e-10!86;UBERON:0007284!5.39e-10!86;UBERON:0005743!6.86e-10!86;UBERON:0002050!7.73e-10!605;UBERON:0005423!7.73e-10!605;UBERON:0001017!7.75e-10!82;UBERON:0002346!2.06e-09!90;UBERON:0003056!4.36e-09!61;UBERON:0002616!1.06e-08!59;UBERON:0000955!2.63e-08!69;UBERON:0006238!2.63e-08!69;UBERON:0000073!4.91e-08!94;UBERON:0001016!4.91e-08!94;UBERON:0002780!1.42e-07!41;UBERON:0001890!1.42e-07!41;UBERON:0006240!1.42e-07!41;UBERON:0001049!1.97e-07!57;UBERON:0005068!1.97e-07!57;UBERON:0006241!1.97e-07!57;UBERON:0007135!1.97e-07!57;UBERON:0003080!4.35e-07!42;UBERON:0002791!9.10e-07!33;UBERON:0001869!9.28e-07!32;UBERON:0001893!9.75e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.01e-07,171;UBERON:0000924,4.01e-07,171;UBERON:0006601,4.01e-07,171 | |||
|phase1_expression=0.726713517082227,1.49870366723688,1.40954404095971,4.00293193412522,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,4.15038607047327,4.22027165165526,0.37129905888014,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,11.3271373430645,8.77202972350288,6.89600387251793,2.86235987131057,3.42186062682211,2.76193807108566,0,0,0,0.393364276848904,0,0.309632246632152,0,0.90361775633475,0.369754010166788,0,0,0.293600439334847,0.553995408531877,1.40381113229099,0,0,0,0,1.45398238779565,1.13362783106643,0.485168122375632,1.85943229524548,0.822335776043652,0.309706370895104,1.43846196161075,1.0246428261164,0.945928919554341,0.344745680736619,0.645484683583826,1.35426486594342,2.44715041405386,1.63743690034707,1.12361742222542,1.83650335422542,1.28371610830437,2.55734850319616,0.989553900560148,0.997318288108159,0.426224750532694,1.7412554317715,2.26954089876456,0.622822248995575,1.50749199154046,0,0.65156653411535,1.21079900526674,0.368277635987565,0.949387162322653,0.211255286311942,0.425208599930087,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0.361439152384566,2.00535164254356,0.724232594804119,0.795285947051099,0.486634870302636,0.945348171640679,2.21729397462564,2.10803485663503,0.654895377488563,3.27865759463288,1.85392221392215,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,1.22031028774085,0,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,1.3082821564276,0.993943903390637,0.759783069987479,0.794455084879313,1.43418310374407,1.41867352879343,3.92474320099615,2.1349799145941,6.166688710429,0.622422070799533,0,0.163461903113459,2.72443369760877,10.37116664064,1.17160715916898,0,0,0.298897361103602,0,0.323745888736263,0,1.22492502752936,1.71968044236475,2.37649296704261,0,1.23633464639278,0,0,0,2.00189631795143,0.277064115484183,1.75591048352335,0.612975591598039,3.30523729594513,0.340296549480063,0.538168907066586,0.640672166455702,1.27159140695737,1.80054657650641,0.515262646192195,0.772921620136887,1.48893485065272,2.02531598689519,2.43592512902997,2.01947019395292,0.920498986422993,4.36444353410792,0.710019185033229,0.201504196455281,0.67824236924195,0.773043412653187,0.545492241181669,0.573609190778008,0.487894824518382,0.662648841607426,0.464775771478074,1.96956004529204,0.504641701751257,1.82488679537915,0,0.643240938192885,0,0,0,0.591534000199219,0.505754070234305,0,0.110293972732394,0,0.71181185733329,0.269662616320329,0.588664395376038,0,1.4763109092493,0,6.9967581926338,7.3504355692771,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,1.31700342490351,0,0.402115889646523,1.85176890317059,0.977424915930974,0,1.44331342025273,1.507095264676,4.46153038096122,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0.567100388969546,0.626909658919938,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,1.30788020649984,0.1466765716419,0.904902010304444,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,1.74306691720059,1.89948683245908,0,0,0,4.79249710983165,17.2292903751171,0,0.723906533337896,0,0,0,0,0,0,1.27047312111232,22.1237751557957,9.27946575333234,21.1070494321279,6.37938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,2.3195768543631,2.36553622550902,0.585707074963566,0.601892199455438,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,8.41944977089785,3.43143423810856,0,0.215714200818617,0.320182673410333,0.909382714338778,14.9791895559447,5.14063498660456,2.48107807818777,1.68808170616869,1.68396056659844,1.28139149255701,4.09365799253363,1.60853921143608,2.96836132889982,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.120859449591622,0.802025881213139,0.368323955743585,0,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0.340187410553031,0.431831832204279,3.08454505380579,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0.103041011647722,0.0915694648183434,0.247528499761764,1.14853107599234,0.650060246036521,0,0.48335359146061,0,0.15350367472613,0.137836572484531,0,0,0,2.22580089116843,0.826424576804891,1.15314040419064,0.382838137483752,1.2138933702666,2.78907329578371,2.51849877464512,0,1.23213432070436,0.532306030317022,0.869932992075073,2.03856641014312,0,0,1.2655176988749,0.571890581771475,0.255897791311334,0,1.59101623962968,0.78494864019923,0,0,0.235624804691373,0.202182481573316,1.58510321173008,0,0.48763373908959,0.487426979262569,0,0,0,1.13008116620243,2.2054613741845,1.32687795048244,1.31535265576129,0,0.655894752046633,0,0.30982349809975,0,0,0.0982490410131212,0,0,1.26664581178598,0.658589785919804,0.75894634753143,0,0.288666338176536,0,0,0.376575203107117,1.29151611801369,1.68471475667626,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0.1068240711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| |||
|short_description=p2@MN1 | |||
}} |
Revision as of 15:06, 21 January 2014
Short description: | p2@MN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MN1_5end |
Coexpression cluster: | C4092_occipital_duodenum_temporal_parietal_Fibroblast_Neural_Multipotent |
Association with transcript: | -11bp_to_ENST00000302326, NM_002430, uc003adj.2_5end |
EntrezGene: | MN1 |
HGNC: | 7180 |
UniProt: | Q10571 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.06e-09 | 76 |
oligodendrocyte | 2.55e-07 | 7 |
macroglial cell | 2.55e-07 | 7 |
astrocyte | 2.55e-07 | 7 |
oligodendrocyte precursor cell | 2.55e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.01e-07 | 171 |
ectoderm | 4.01e-07 | 171 |
presumptive ectoderm | 4.01e-07 | 171 |