FFCP PHASE1:Hg19::chr21:27011792..27011834,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14686 | |||
|TSSclassifier=strong | |||
|UniProt=B4DGT9 | |||
|association_with_transcript=-75bp_to_ENST00000425221_5end | |||
|description=CAGE_peak_3_at_JAM2_5end | |||
|id=chr21:27011792..27011834,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.77e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.94e-39!115;UBERON:0000073!4.93e-34!94;UBERON:0001016!4.93e-34!94;UBERON:0005743!6.38e-34!86;UBERON:0001017!8.30e-34!82;UBERON:0001049!7.00e-31!57;UBERON:0005068!7.00e-31!57;UBERON:0006241!7.00e-31!57;UBERON:0007135!7.00e-31!57;UBERON:0003075!2.78e-30!86;UBERON:0007284!2.78e-30!86;UBERON:0000955!1.34e-27!69;UBERON:0006238!1.34e-27!69;UBERON:0002346!1.65e-27!90;UBERON:0002616!5.85e-26!59;UBERON:0003080!8.86e-23!42;UBERON:0004121!2.10e-22!169;UBERON:0002780!2.44e-22!41;UBERON:0001890!2.44e-22!41;UBERON:0006240!2.44e-22!41;UBERON:0003056!1.68e-21!61;UBERON:0000924!5.90e-21!173;UBERON:0006601!5.90e-21!173;UBERON:0000033!4.05e-20!123;UBERON:0000153!6.47e-20!129;UBERON:0007811!6.47e-20!129;UBERON:0002020!6.49e-19!34;UBERON:0003528!6.49e-19!34;UBERON:0001893!1.27e-18!34;UBERON:0002791!3.49e-18!33;UBERON:0001869!1.02e-17!32;UBERON:0000475!1.29e-16!365;UBERON:0000025!1.57e-14!194;UBERON:0000956!3.84e-14!25;UBERON:0000203!3.84e-14!25;UBERON:0004111!2.68e-13!241;UBERON:0002619!2.03e-12!22;UBERON:0000477!1.09e-11!286;UBERON:0001950!2.22e-11!20;UBERON:0000483!2.39e-11!309;UBERON:0000119!2.78e-11!312;UBERON:0000468!3.13e-11!659;UBERON:0000481!3.87e-11!347;UBERON:0000480!1.71e-10!626;UBERON:0000467!1.95e-10!625;UBERON:0003076!3.49e-09!15;UBERON:0003057!3.49e-09!15;UBERON:0000479!3.53e-09!787;UBERON:0000064!6.00e-09!219;UBERON:0000922!1.19e-08!612;UBERON:0002050!1.78e-07!605;UBERON:0005423!1.78e-07!605;UBERON:0000923!3.08e-07!604;UBERON:0005291!3.08e-07!604;UBERON:0006598!3.08e-07!604;UBERON:0002532!3.08e-07!604;UBERON:0004732!3.45e-07!13;UBERON:0004733!3.73e-07!12;UBERON:0002028!3.73e-07!12;UBERON:0007277!3.73e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.97e-20;34!UBERON:0002020;3.97e-20;34!UBERON:0000073;4.90e-20;53!UBERON:0002616;4.90e-20;53!UBERON:0001893;7.44e-20;34!UBERON:0002780;7.88e-20;41!UBERON:0001890;7.88e-20;41!UBERON:0001869;8.79e-20;32!UBERON:0002791;1.10e-19;32!UBERON:0000956;3.14e-17;25!UBERON:0000203;3.14e-17;25!UBERON:0002619;4.19e-15;22!UBERON:0000955;6.79e-15;68!UBERON:0001017;6.96e-15;75!UBERON:0001016;3.28e-14;83!UBERON:0001950;8.14e-14;20!UBERON:0007023;7.80e-13;114!UBERON:0004732;1.12e-08;13!UBERON:0004733;1.20e-08;12!UBERON:0002028;1.20e-08;12!UBERON:0000125;2.11e-07;9!UBERON:0002308;2.11e-07;9!UBERON:0002420;9.14e-07;9!UBERON:0007245;9.14e-07;9!UBERON:0010009;9.14e-07;9!UBERON:0010011;9.14e-07;9!UBERON:0000454;9.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.76e-46,114;UBERON:0001017,1.74e-40,81;UBERON:0001016,2.59e-40,89;UBERON:0001049,8.06e-38,56;UBERON:0005068,8.06e-38,56;UBERON:0006241,8.06e-38,56;UBERON:0007135,8.06e-38,56;UBERON:0003075,2.99e-35,82;UBERON:0007284,2.99e-35,82;UBERON:0000073,4.17e-35,53;UBERON:0002616,4.17e-35,53;UBERON:0000955,9.98e-33,68;UBERON:0006238,9.98e-33,68;UBERON:0002346,3.33e-32,86;UBERON:0002780,1.20e-27,41;UBERON:0001890,1.20e-27,41;UBERON:0003080,1.20e-27,41;UBERON:0006240,1.20e-27,41;UBERON:0010314,9.83e-27,132;UBERON:0010371,1.50e-24,104;UBERON:0003056,1.80e-23,61;UBERON:0003528,2.42e-23,34;UBERON:0002020,2.42e-23,34;UBERON:0004121,2.80e-23,171;UBERON:0000924,2.80e-23,171;UBERON:0006601,2.80e-23,171;UBERON:0001893,5.63e-23,34;UBERON:0001869,7.71e-22,32;UBERON:0002791,1.05e-21,32;UBERON:0000956,2.40e-17,25;UBERON:0000203,2.40e-17,25;UBERON:0011216,8.88e-16,223;UBERON:0000025,2.31e-15,192;UBERON:0002619,3.48e-15,22;UBERON:0001950,7.00e-14,20;UBERON:0004111,7.30e-14,240;UBERON:0003076,3.98e-11,15;UBERON:0003057,3.98e-11,15;UBERON:0000479,2.33e-09,773;UBERON:0000483,2.39e-09,306;UBERON:0000119,6.31e-09,309;UBERON:0004732,1.25e-08,13;UBERON:0004733,1.39e-08,12;UBERON:0002028,1.39e-08,12;UBERON:0007277,1.39e-08,12;UBERON:0000922,1.94e-08,592;UBERON:0005423,4.99e-08,581;UBERON:0000125,1.91e-07,9;UBERON:0002308,1.91e-07,9;UBERON:0000923,4.63e-07,560;UBERON:0010316,4.63e-07,560;UBERON:0005291,4.63e-07,560;UBERON:0006598,4.63e-07,560;UBERON:0010317,4.63e-07,560;UBERON:0002532,4.63e-07,560;UBERON:0002050,5.31e-07,564;UBERON:0002420,8.58e-07,9;UBERON:0007245,8.58e-07,9;UBERON:0010009,8.58e-07,9;UBERON:0010011,8.58e-07,9;UBERON:0000454,8.58e-07,9 | |||
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| |||
|short_description=p3@JAM2 | |||
}} |
Revision as of 13:09, 21 January 2014
Short description: | p3@JAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_JAM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -75bp_to_ENST00000425221_5end |
EntrezGene: | JAM2 |
HGNC: | 14686 |
UniProt: | B4DGT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data