FFCP PHASE1:Hg19::chr21:17791908..17791940,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-58bp_to_ENST00000418813_5end | |||
|coexpression_cluster_id=C4069 | |||
|description=CAGE_peak_3_at_LINC00478_5end | |||
|id=chr21:17791908..17791940,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-27!115;UBERON:0001017!1.72e-18!82;UBERON:0001049!1.48e-17!57;UBERON:0005068!1.48e-17!57;UBERON:0006241!1.48e-17!57;UBERON:0007135!1.48e-17!57;UBERON:0005743!2.79e-17!86;UBERON:0000073!4.45e-16!94;UBERON:0001016!4.45e-16!94;UBERON:0000955!6.73e-16!69;UBERON:0006238!6.73e-16!69;UBERON:0002616!7.15e-16!59;UBERON:0002346!1.83e-15!90;UBERON:0003075!1.37e-14!86;UBERON:0007284!1.37e-14!86;UBERON:0003080!4.24e-13!42;UBERON:0002780!5.59e-13!41;UBERON:0001890!5.59e-13!41;UBERON:0006240!5.59e-13!41;UBERON:0000468!5.77e-12!659;UBERON:0000477!1.82e-11!286;UBERON:0000924!4.14e-11!173;UBERON:0006601!4.14e-11!173;UBERON:0000153!4.79e-11!129;UBERON:0007811!4.79e-11!129;UBERON:0000033!1.39e-10!123;UBERON:0004121!2.18e-10!169;UBERON:0001893!3.11e-10!34;UBERON:0002020!3.14e-10!34;UBERON:0003528!3.14e-10!34;UBERON:0002791!5.02e-10!33;UBERON:0001869!5.82e-10!32;UBERON:0002050!1.28e-09!605;UBERON:0005423!1.28e-09!605;UBERON:0000922!1.46e-09!612;UBERON:0004111!2.58e-09!241;UBERON:0003056!2.91e-09!61;UBERON:0000923!3.01e-09!604;UBERON:0005291!3.01e-09!604;UBERON:0006598!3.01e-09!604;UBERON:0002532!3.01e-09!604;UBERON:0000481!4.52e-09!347;UBERON:0000467!1.05e-08!625;UBERON:0000480!1.45e-08!626;UBERON:0000956!2.65e-08!25;UBERON:0000203!2.65e-08!25;UBERON:0000062!7.04e-08!511;UBERON:0000025!1.62e-07!194;UBERON:0002619!4.45e-07!22;UBERON:0007100!4.65e-07!27;UBERON:0000479!8.19e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.62e-08;25!UBERON:0002780;1.75e-07;41!UBERON:0001890;1.75e-07;41!UBERON:0000956;5.54e-07;25!UBERON:0000203;5.54e-07;25!UBERON:0000073;6.35e-07;53!UBERON:0002616;6.35e-07;53!UBERON:0001869;7.90e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.60e-21,114;UBERON:0011216,9.41e-13,223;UBERON:0001017,3.33e-12,81;UBERON:0001016,1.37e-11,89;UBERON:0001049,8.63e-11,56;UBERON:0005068,8.63e-11,56;UBERON:0006241,8.63e-11,56;UBERON:0007135,8.63e-11,56;UBERON:0000073,3.74e-10,53;UBERON:0002616,3.74e-10,53;UBERON:0000955,9.50e-10,68;UBERON:0006238,9.50e-10,68;UBERON:0002346,4.88e-09,86;UBERON:0002780,5.93e-09,41;UBERON:0001890,5.93e-09,41;UBERON:0003080,5.93e-09,41;UBERON:0006240,5.93e-09,41;UBERON:0003075,7.46e-09,82;UBERON:0007284,7.46e-09,82;UBERON:0010314,1.53e-08,132;UBERON:0004121,2.48e-08,171;UBERON:0000924,2.48e-08,171;UBERON:0006601,2.48e-08,171;UBERON:0001869,4.49e-07,32;UBERON:0002050,4.77e-07,564;UBERON:0001893,4.86e-07,34;UBERON:0000923,5.87e-07,560;UBERON:0010316,5.87e-07,560;UBERON:0005291,5.87e-07,560;UBERON:0006598,5.87e-07,560;UBERON:0010317,5.87e-07,560;UBERON:0002532,5.87e-07,560;UBERON:0007100,6.24e-07,27;UBERON:0005423,6.79e-07,581;UBERON:0000922,9.29e-07,592;UBERON:0000956,9.39e-07,25;UBERON:0000203,9.39e-07,25 | |||
|phase1_expression=1.2717486548939,0.642301571672949,3.24195129420734,1.0007329835313,4.02264984984559,1.74467704820074,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0,1.96993692922861,0.204000691244253,2.19418305034661,4.57977579409691,2.6006140763848,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,2.01210257911091,1.91793842765295,2.53007406669196,1.00267582127178,2.02785126545153,0,0.486634870302636,1.60709189178915,1.33037638477538,1.40535657109002,4.51877810467109,0,0,0,0,0,0,0,0,0.39752481473341,0,0,1.69592382577203,0.419499436209906,0,0,0.516833518338658,0.35576626268671,1.00416183829401,0,0,0.488124115096339,1.47065232138347,0,2.76829157680647,1.79623498100936,1.0135033243499,3.06633274931766,0,0.183201743930407,0,0,0,0,0.886413581652058,0.662045904066094,6.02356903572509,0.709336764396714,1.68203280042692,0,0.24666754841716,4.66816553099649,0.269421344139376,1.30769522490767,1.36221684880438,2.30470369792,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.680593098960126,0,0,0,0.300091096084402,0,0,0,0,0,0,0.368199594569197,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65629520055781,2.02301628093722,1.68707720918437,1.65440959098591,1.74303555273925,1.42362371466658,1.8876383142423,2.5508790466295,2.69323009862473,2.21446636387394,0,2.057870056657,0,0,0,1.77236972004421,0,0,0.686271241194102,0,0,0,0,0,0,2.88662684050547,0.463721619900307,0.234817388471643,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.50496973370552,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0,0,0.845302752556,5.85063856486715,2.08014873822732,0,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0,1.74306691720059,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,1.42636905040718,0.289562613335158,0,1.43248770591916,0,0,0,0,2.7950408664471,3.90419561572865,5.41302168944387,3.35032530668698,4.46557126157214,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0.902838299183157,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0.496215615637554,1.84154367945675,0.280660094433074,1.15325234330131,2.04682899626681,0.482561763430822,0,0.154209693802656,0.355123450626254,1.06765302817952,0,0.232420756919918,0,0,0,1.7222167224691,1.63882051206045,3.54035920390445,0,0,0,0,0,0,0.340187410553031,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,2.98818933778395,0,0.165018999841176,0,0,0,0.290012154876366,0.462145851343933,0.921022048356777,0.137836572484531,1.39646318328756,1.0151168573996,0.0852266274161009,1.24644849905432,0.330569830721956,0,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.855877976067841,0,0,1.79872457583315,2.19629623788844,1.88499843753098,0,0,0,1.46290121726877,0.243713489631284,0,3.41249778519964,2.68670320712054,0,0,0,0.438450885253763,0.578775534266688,1.31178950409327,0,0.30982349809975,0,0,0,0,3.19284957663538,2.32218398827431,1.31717957183961,0,0,0,0,0,3.48332062874083,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0,1.69338866179106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,4.92349595790849,1.6227340708559,0,12.6888304579065,0,1.90460633053462,0.970884173996107,0,0,0,1.78178808499583,0.307160702099232,0,2.67271891179974,0,0,0.211125408127993,6.17668763578316,1.93398740871803,0,0,0,0,0,0,0,1.97286811273867,0,0,0,0.556608588971108,0,0.520855522170466,0.349839999984783,0.724999575434793,0,0.254253650292766,0,0,1.45802306691627,0,0.885741385813839,2.29133233388275,1.52581736317083,2.65390223834939,0.886642856860642,0.87754158861589,12.4189848411649,0,19.8531666939796,0,0,0,0,0.957003479195758,1.55715908783166,2.66517388009317,0,0.31396051279005,3.98908036560375,0,0,0,0,7.62895579105818,0,0,0,0,2.98578579323551,0.884575645033392,1.83309043480088,0,0,0,1.55022605855557,11.236087062183,1.1713222286267,0,0,0,7.10251925128903,1.20990716048664,3.67287313956588,2.71702292402498,0.751617097072463,4.04383946449264,0,0,0,0,0,0.138674673013139,0,0,0,18.3463001654132,0,5.90213620863419,3.36210858596454,4.27000376676688,3.006659511141,1.235585773681,2.71176888936639,0,0.19871461170299,1.58276989889697,0,0,5.33632486848381,2.39771531498556,0,0.114536596165916,0,0.14405479798815,0,0,1.9026588850306,2.92887969674533,0.611989305817931,10.1132706465532,0.600420288709789,0.684526894459965,0,2.57859264851974,0,20.6668976941468,14.8954275607594,4.30723814746088,5.19165401297377,4.29226048136571,4.01708623395371,7.18863155607971,0.360299883542404,0,0,0,0,0.393709926058995,0,3.18091875923721,1.49823746722733,0,0,0,0,6.96421759102155,0.971992906528395,0,2.36417121897595,0.786818822024972,0,0.35857467866569,0,7.14695326373367,6.62091970365432,1.5256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| |||
|short_description=p3@LINC00478 | |||
}} |
Revision as of 13:03, 21 January 2014
Short description: | p3@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LINC00478_5end |
Coexpression cluster: | C4069_medulloblastoma_uterus_cervix_ovary_trachea_heart_throat |
Association with transcript: | -58bp_to_ENST00000418813_5end |
EntrezGene: | NA |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data