FFCP PHASE1:Hg19::chr20:62339381..62339428,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84619 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15948 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N5A5 | |||
|association_with_transcript=0bp_to_ENST00000355969,ENST00000357119,ENST00000431125,ENST00000477340,ENST00000490623,uc002ygk.2,uc002ygm.2,uc010gkk.1,uc010gkl.1_5end | |||
|description=CAGE_peak_1_at_ZGPAT_5end | |||
|id=chr20:62339381..62339428,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.63e-16!140;CL:0002087!1.62e-13!119;CL:0002031!8.43e-13!124;CL:0002057!1.57e-11!42;CL:0000860!1.86e-11!45;CL:0000766!3.49e-10!76;CL:0000988!6.99e-10!182;CL:0000037!8.09e-10!172;CL:0000566!8.09e-10!172;CL:0002032!1.92e-09!165;CL:0000837!1.92e-09!165;CL:0002194!1.80e-08!63;CL:0000576!1.80e-08!63;CL:0000040!1.80e-08!63;CL:0000559!1.80e-08!63;CL:0000839!2.94e-08!70;CL:0002009!5.10e-08!65;CL:0000557!5.73e-08!71;CL:0000791!8.35e-08!18;CL:0000789!8.35e-08!18;CL:0002420!8.35e-08!18;CL:0002419!8.35e-08!18;CL:0000790!8.35e-08!18;CL:0000084!7.33e-07!25;CL:0000827!7.33e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-08;33!CL:0002057;1.19e-08;33!CL:0000791;7.84e-08;18!CL:0000789;7.84e-08;18!CL:0002419;7.84e-08;18!CL:0000084;5.71e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.90e-16,136;CL:0002087,6.97e-14,115;CL:0002031,3.95e-13,120;CL:0000860,1.57e-11,42;CL:0002057,1.57e-11,42;CL:0000766,1.25e-10,72;CL:0000473,1.59e-10,48;CL:0000234,1.59e-10,48;CL:0000037,5.55e-10,168;CL:0000988,6.57e-10,177;CL:0002032,1.32e-09,161;CL:0000837,1.32e-09,161;CL:0002194,6.45e-09,59;CL:0000576,6.45e-09,59;CL:0000040,6.45e-09,59;CL:0000559,6.45e-09,59;CL:0000839,1.22e-08,66;CL:0002009,2.02e-08,61;CL:0000557,2.49e-08,67;CL:0000791,8.35e-08,18;CL:0000789,8.35e-08,18;CL:0002420,8.35e-08,18;CL:0002419,8.35e-08,18;CL:0000790,8.35e-08,18;CL:0000084,7.33e-07,25;CL:0000827,7.33e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;6.51e-09;42!CL:0000790;7.84e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.52e-10!102;UBERON:0003061!4.52e-10!102;UBERON:0002193!4.59e-09!112;UBERON:0002405!1.25e-07!115;UBERON:0002371!2.85e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.18e-10,98;UBERON:0003061,2.18e-10,98;UBERON:0002193,2.57e-09,108;UBERON:0002371,1.48e-07,76;UBERON:0002405,3.58e-07,93 | |||
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| |||
|short_description=p1@ZGPAT | |||
}} |
Revision as of 12:49, 21 January 2014
Short description: | p1@ZGPAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZGPAT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355969, ENST00000357119, ENST00000431125, ENST00000477340, ENST00000490623, uc002ygk.2, uc002ygm.2, uc010gkk.1, uc010gkl.1_5end |
EntrezGene: | ZGPAT |
HGNC: | 15948 |
UniProt: | Q8N5A5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.90e-16 | 136 |
nongranular leukocyte | 6.97e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.95e-13 | 120 |
classical monocyte | 1.57e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.57e-11 | 42 |
myeloid leukocyte | 1.25e-10 | 72 |
defensive cell | 1.59e-10 | 48 |
phagocyte | 1.59e-10 | 48 |
hematopoietic stem cell | 5.55e-10 | 168 |
hematopoietic cell | 6.57e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.32e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-09 | 161 |
monopoietic cell | 6.45e-09 | 59 |
monocyte | 6.45e-09 | 59 |
monoblast | 6.45e-09 | 59 |
promonocyte | 6.45e-09 | 59 |
myeloid lineage restricted progenitor cell | 1.22e-08 | 66 |
macrophage dendritic cell progenitor | 2.02e-08 | 61 |
granulocyte monocyte progenitor cell | 2.49e-08 | 67 |
mature alpha-beta T cell | 8.35e-08 | 18 |
alpha-beta T cell | 8.35e-08 | 18 |
immature T cell | 8.35e-08 | 18 |
mature T cell | 8.35e-08 | 18 |
immature alpha-beta T cell | 8.35e-08 | 18 |
T cell | 7.33e-07 | 25 |
pro-T cell | 7.33e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.18e-10 | 98 |
blood island | 2.18e-10 | 98 |
hemolymphoid system | 2.57e-09 | 108 |
bone marrow | 1.48e-07 | 76 |
immune system | 3.58e-07 | 93 |