FFCP PHASE1:Hg19::chr20:5904275..5904286,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5904275..5904286,+ | |||
|id=chr20:5904275..5904286,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.07e-27;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.71e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.90e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.88e-48!57;UBERON:0005068!1.88e-48!57;UBERON:0006241!1.88e-48!57;UBERON:0007135!1.88e-48!57;UBERON:0002616!3.93e-43!59;UBERON:0000955!2.29e-38!69;UBERON:0006238!2.29e-38!69;UBERON:0000073!1.97e-35!94;UBERON:0001016!1.97e-35!94;UBERON:0005743!1.85e-34!86;UBERON:0002780!5.68e-34!41;UBERON:0001890!5.68e-34!41;UBERON:0006240!5.68e-34!41;UBERON:0001017!6.90e-34!82;UBERON:0003080!4.57e-33!42;UBERON:0003075!2.26e-32!86;UBERON:0007284!2.26e-32!86;UBERON:0001869!2.81e-31!32;UBERON:0007023!6.02e-31!115;UBERON:0002346!1.22e-30!90;UBERON:0002020!2.10e-29!34;UBERON:0003528!2.10e-29!34;UBERON:0001893!2.96e-29!34;UBERON:0002791!9.25e-27!33;UBERON:0003056!9.57e-24!61;UBERON:0002619!6.40e-23!22;UBERON:0000153!1.68e-22!129;UBERON:0007811!1.68e-22!129;UBERON:0000033!3.67e-22!123;UBERON:0001950!3.11e-21!20;UBERON:0000956!5.66e-20!25;UBERON:0000203!5.66e-20!25;UBERON:0004121!1.79e-19!169;UBERON:0000924!7.50e-19!173;UBERON:0006601!7.50e-19!173;UBERON:0000200!2.92e-17!6;UBERON:0003076!2.84e-16!15;UBERON:0003057!2.84e-16!15;UBERON:0004733!5.60e-16!12;UBERON:0002028!5.60e-16!12;UBERON:0007277!5.60e-16!12;UBERON:0004732!1.13e-14!13;UBERON:0000025!1.03e-12!194;UBERON:0004111!1.67e-12!241;UBERON:0002680!1.21e-11!9;UBERON:0001895!1.21e-11!9;UBERON:0010092!1.21e-11!9;UBERON:0002308!4.73e-11!9;UBERON:0000125!4.73e-11!9;UBERON:0003296!2.00e-10!4;UBERON:0010133!2.00e-10!4;UBERON:0000007!6.85e-10!2;UBERON:0009663!1.97e-09!7;UBERON:0000477!2.59e-09!286;UBERON:0001870!2.64e-09!2;UBERON:0001875!3.99e-09!2;UBERON:0006514!3.99e-09!2;UBERON:0000483!9.72e-09!309;UBERON:0000119!1.40e-08!312;UBERON:0000064!1.46e-08!219;UBERON:0001871!2.02e-08!7;UBERON:0000475!3.52e-08!365;UBERON:0002298!4.47e-08!8;UBERON:0002420!2.40e-07!9;UBERON:0007245!2.40e-07!9;UBERON:0010009!2.40e-07!9;UBERON:0010011!2.40e-07!9;UBERON:0000454!2.40e-07!9;UBERON:0002037!4.23e-07!6;UBERON:0006215!4.23e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;3.36e-14;6!UBERON:0002037;4.24e-14;6!UBERON:0000007;1.82e-11;2!UBERON:0002771;2.47e-11;2!UBERON:0002702;3.52e-11;2!UBERON:0000073;4.06e-10;53!UBERON:0002616;4.06e-10;53!UBERON:0002680;1.01e-09;9!UBERON:0001895;1.01e-09;9!UBERON:0001950;3.96e-09;20!UBERON:0000955;1.06e-08;68!UBERON:0002619;2.19e-08;22!UBERON:0001870;7.02e-08;3!UBERON:0004733;1.62e-07;12!UBERON:0002028;1.62e-07;12!UBERON:0000956;1.75e-07;25!UBERON:0000203;1.75e-07;25!UBERON:0004732;5.26e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,2.85e-14,6;UBERON:0002037,4.24e-14,6;UBERON:0006215,4.24e-14,6;UBERON:0000073,3.72e-13,53;UBERON:0002616,3.72e-13,53;UBERON:0001049,1.84e-12,56;UBERON:0005068,1.84e-12,56;UBERON:0006241,1.84e-12,56;UBERON:0007135,1.84e-12,56;UBERON:0000007,1.82e-11,2;UBERON:0002771,2.47e-11,2;UBERON:0002702,2.73e-11,2;UBERON:0000955,3.94e-10,68;UBERON:0006238,3.94e-10,68;UBERON:0002680,1.01e-09,9;UBERON:0001895,1.01e-09,9;UBERON:0010092,1.01e-09,9;UBERON:0001950,3.85e-09,20;UBERON:0001017,1.59e-08,81;UBERON:0003075,1.59e-08,82;UBERON:0007284,1.59e-08,82;UBERON:0002619,2.14e-08,22;UBERON:0007023,2.80e-08,114;UBERON:0002346,3.99e-08,86;UBERON:0001870,5.93e-08,3;UBERON:0002780,6.02e-08,41;UBERON:0001890,6.02e-08,41;UBERON:0003080,6.02e-08,41;UBERON:0006240,6.02e-08,41;UBERON:0001016,1.12e-07,89;UBERON:0004733,1.62e-07,12;UBERON:0002028,1.62e-07,12;UBERON:0007277,1.62e-07,12;UBERON:0000956,1.71e-07,25;UBERON:0000203,1.71e-07,25;UBERON:0004732,5.26e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,1.52581736317083,0.884634079449797,1.47773809476774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.126621591911757,0,0,0,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.44052529803926,0.500763722825999,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.764467467344097,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0.535701835878287,0,14.5671745016792,0.91064876540519,0,0,0,0.40781839786099,0.263091094251396,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,9.35068643258431,0.118920090777569,0,0.109940516745429,0,0,0,6.1141248526998,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:5904275..5904286,+ | |||
}} |
Revision as of 10:09, 21 January 2014
Short description: | p@chr20:5904275..5904286, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5904275..5904286, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.90e-13 | 14 |