FFCP PHASE1:Hg19::chr20:4228968..4229010,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=280 | |||
|TSSclassifier=strong | |||
|UniProt=P25100 | |||
|association_with_transcript=345bp_to_M76446_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_3_at_ADRA1D_5end | |||
|id=chr20:4228968..4229010,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;1.66e-15;2!CL:1000398;1.66e-15;2!CL:0000333;6.39e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.54e-15,2;CL:1000398,1.54e-15,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.42e-11!10;DOID:3095!4.17e-07!22;DOID:2994!4.17e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;4.66e-26;10!DOID:3095;5.68e-21;22!DOID:2994;5.68e-21;22!DOID:3193;2.37e-15;2!DOID:962;2.37e-15;2!DOID:3307;2.37e-15;2!DOID:1192;1.09e-10;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.07e-26,10;DOID:3095,5.68e-21,22;DOID:2994,5.68e-21,22;DOID:3307,2.05e-15,2;DOID:3193,2.74e-15,2;DOID:962,2.74e-15,2;DOID:1192,1.20e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0001896!8.80e-07!3;UBERON:0005290!8.80e-07!3;UBERON:0010096!8.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.16e-29;4!UBERON:0000923;3.16e-29;4!UBERON:0010316;3.16e-29;4!UBERON:0005291;3.16e-29;4!UBERON:0002050;1.28e-23;5!UBERON:0005423;1.28e-23;5!UBERON:0001281;1.66e-15;2!UBERON:0003497;1.66e-15;2!UBERON:0003909;1.66e-15;2!UBERON:0003835;1.66e-15;2!UBERON:0003714;2.37e-15;2!UBERON:0002106;8.57e-11;3!UBERON:0001280;8.57e-11;3!UBERON:0004647;8.57e-11;3!UBERON:0004177;5.54e-07;5!UBERON:0005057;5.54e-07;5!UBERON:0000013;6.39e-07;5!UBERON:0002410;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.54e-15,2;UBERON:0003497,1.54e-15,2;UBERON:0003909,1.54e-15,2;UBERON:0003835,1.54e-15,2;UBERON:0003714,2.74e-15,2;UBERON:0001280,8.17e-11,3;UBERON:0004647,8.17e-11,3;UBERON:0005171,8.17e-11,3;UBERON:0002106,8.99e-11,3;UBERON:0004854,8.99e-11,3;UBERON:0009034,8.99e-11,3;UBERON:0002095,8.99e-11,3;UBERON:0004782,8.99e-11,3;UBERON:0003281,8.99e-11,3;UBERON:0009664,8.99e-11,3;UBERON:0002296,8.99e-11,3;UBERON:0005602,8.99e-11,3;UBERON:0001179,8.99e-11,3;UBERON:0006293,8.99e-11,3;UBERON:0000013,6.77e-07,5;UBERON:0002410,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,4.66567381413207,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0,1.48802444071178,10.5345399620152,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.351742488719241,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,2.19156819110162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@ADRA1D | |||
}} |
Revision as of 10:01, 21 January 2014
Short description: | p3@ADRA1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ADRA1D_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 345bp_to_M76446_5end |
EntrezGene: | ADRA1D |
HGNC: | 280 |
UniProt: | P25100 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.54e-15 | 2 |
endothelial cell of hepatic sinusoid | 1.54e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.54e-15 | 2 |
abdomen blood vessel | 1.54e-15 | 2 |
sinusoid | 1.54e-15 | 2 |
abdominal segment blood vessel | 1.54e-15 | 2 |
neural tissue | 2.74e-15 | 2 |
liver parenchyma | 8.17e-11 | 3 |
liver lobule | 8.17e-11 | 3 |
hepatic duct | 8.17e-11 | 3 |
spleen | 8.99e-11 | 3 |
gastrointestinal system mesentery | 8.99e-11 | 3 |
stomach region | 8.99e-11 | 3 |
mesentery | 8.99e-11 | 3 |
gastrointestinal system serosa | 8.99e-11 | 3 |
mesentery of stomach | 8.99e-11 | 3 |
gut mesentery | 8.99e-11 | 3 |
dorsal mesentery | 8.99e-11 | 3 |
dorsal mesogastrium | 8.99e-11 | 3 |
peritoneal cavity | 8.99e-11 | 3 |
spleen primordium | 8.99e-11 | 3 |
sympathetic nervous system | 6.77e-07 | 5 |
autonomic nervous system | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.07e-26 | 10 |
germ cell and embryonal cancer | 5.68e-21 | 22 |
germ cell cancer | 5.68e-21 | 22 |
teratoma | 2.05e-15 | 2 |
peripheral nerve sheath neoplasm | 2.74e-15 | 2 |
neurofibroma | 2.74e-15 | 2 |
peripheral nervous system neoplasm | 1.20e-10 | 3 |